BAC Information

Click to search

BAC

Clone NameB6Ng01-166F22
Chromosome8 (Build37)
Map Location 56,142,286 - 56,143,054
singlet/doubletsinglet
Overlap geneGpm6a
Upstream geneVegfc, Spcs3, Asb5, Spata4, Wdr17
Downstream geneLOC667624, LOC100040156, LOC100040382, LOC100040392, EG546212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166F22.bB6Ng01-166F22.g
ACCDH958171DH958172
length1,258958
definitionDH958171|Mus musculus domesticus DNA, BAC clone: B6Ng01-166F22, 5' end.DH958172|Mus musculus domesticus DNA, BAC clone: B6Ng01-166F22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctcattggacctttgcctgcttctctggctcatgcctgtct
cactttttctcactatcaatgttttatctctcttttctgtctctccttta
cacactatgtgtgattacccaatactcactttacaattagtgggtatact
gctggttttctccttggcttttgctgacaccaacatgtgaccttgcttgc
atccctaggaccctctaaagcatactttaattttaagtgccaatccatct
gagctcttaccctaatgagagacaatgtctgggaactttggatcagtttt
gttctcaatcctataggcaagttatttctctctctctctctctctctctc
tctctctctctctctctctctctctctctgtctctctgtttttgtgtctc
tctcattttcttacacacacacctaccaaacactgtcacacacacacaca
cacacacacacacacacacatccccataaaaaatacacacacacgcaggt
atgcatgcacacacatacacatgcacactccccccccacacacaaactgc
gtagatacacacacactggcgggagtactgatggtgagtggggccagaca
tccacactaaagagaaatgcccccaacacattgagacgcgcggagtctct
ttgtgcctcttaggatctctcacgcgctctacaataccagaaacgcgtct
gcagacagtctctctgtgcacagtacaactgtttttccgctgcgaggcat
ctatcctgcgcacgtgtggagagacgcacccacaatgttagagtgcacac
acagatagttgtggtagaagatattgatatatattttgacatgtcataga
attggtgggagaaaatgtaagagtggaaatgagtataaaattcctggtga
gaagtatggtcgcgcctgaacctggcgcgacccgtggaccaccccgtgat
gcaagggggccgttgctgcccgagcacacccattgttcgtcatgcaggcc
tattcgtgagagagaaagttttggggatgtaattaataaatatgagatta
cctttatatcaaaaggccttctggcactaggaagaggggcctggctatga
agaagagcactggtgtgttgttcacgtgtccccttttggagcgccggcta
ttccctcggtaaacgagagagtcccactgcgcctggagggggaaccttga
gaacattgacactttgggccgagtgtgcgccccccccactcattgaacct
gcgggggc
gaattcccctatactggggcatagaaccttcacaggatctagagcctctc
ctctcattgatgaccaactaggccatcctctgctacatatacagctagag
ccacaagttccaccatgtgttttctttgattggtggtttagttccaagga
gctctcggggtactggttagttcatattgatgttcctcctatggggcttc
aaacctcttcagttccttgggtactttctctagctccttcattgggaacc
ttgtgctccatccaatggatgattgtgagcatcaacttctgtatttgcca
ggcactgacagaacctctcaggagacagctatatcagcctcctgtcagca
agctcttgttggtatctgccatagtgtctgagtttggtggttgtttatgg
gatggctccccaagtggggcaatctctggatggttgttccttcagtctct
gcttcactctttgtctctgtaactccttccatgggcattttgttccccct
tctaagaaagattctgagcttctgggctaatatccacatatcagtgaaag
catatcatttatgttcttttgtgattgggttacctcccttaggaggatat
cctccagatccatccatttttctaagaatagaattacattacttcctcct
accctgtcctccctccagccccttccagatgcctttctccaaaggcctct
catgtccccagtctagttacttttctattaaaatgacaaaacaccatgac
cagggcaacttattaaacaaagcatttaatttgggagctcatcttttcag
gatgctaaagttcatgactcccctagcaagcagtgtggcagcagacagac
aagcagacaggcagataggcatacaggcatggcattagagtagtagctaa
gaccttacacttgatccatagcagagagagagagagagagagagagagag
agagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_56142286_56143054
seq2: B6Ng01-166F22.g_254_1021

seq1  ATGGGGCTTCAAACCTCTTCAGTTCCTTGGGTACTTTCTCTAGCTCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGCTTCAAACCTCTTCAGTTCCTTGGGTACTTTCTCTAGCTCCTTC  50

seq1  ATTGGGAACCTTGTGCTCCATCCAATGGATGATTGTGAGCATCAACTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGAACCTTGTGCTCCATCCAATGGATGATTGTGAGCATCAACTTCT  100

seq1  GTATTTGCCAGGCACTGACAGAACCTCTCAGGAGACAGCTATATCAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGCCAGGCACTGACAGAACCTCTCAGGAGACAGCTATATCAGCCT  150

seq1  CCTGTCAGCAAGCTCTTGTTGGTATCTGCCATAGTGTCTGAGTTTGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAGCAAGCTCTTGTTGGTATCTGCCATAGTGTCTGAGTTTGGTGG  200

seq1  TTGTTTATGGGATGGCTCCCCAAGTGGGGCAATCTCTGGATGGTTGTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATGGGATGGCTCCCCAAGTGGGGCAATCTCTGGATGGTTGTTCC  250

seq1  TTCAGTCTCTGCTTCACTCTTTGTCTCTGTAACTCCTTCCATGGGCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCTCTGCTTCACTCTTTGTCTCTGTAACTCCTTCCATGGGCATTT  300

seq1  TGTTCCCCCTTCTAAGAAAGATTCTGAGCTTCTGGGCTAATATCCACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCCCTTCTAAGAAAGATTCTGAGCTTCTGGGCTAATATCCACATA  350

seq1  TCAGTGAAAGCATATCATTTATGTTCTTTTGTGATTGGGTTACCTCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAAAGCATATCATTTATGTTCTTTTGTGATTGGGTTACCTCCCTT  400

seq1  AGGAGGATATCCTCCAGATCCATCCATTTTTCTAAGAATAGAATTACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGATATCCTCCAGATCCATCCATTTTTCTAAGAATAGAATTACATT  450

seq1  ACTTCCTCCTACCCTGTCCTCCCTCCAGCCCCTTCCAGATGCCTTTCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTCCTACCCTGTCCTCCCTCCAGCCCCTTCCAGATGCCTTTCTCC  500

seq1  AAAGGCCTCTCATGTCCCCAGTCTAGTTACTTTTCTATTAAAATGACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCTCTCATGTCCCCAGTCTAGTTACTTTTCTATTAAAATGACAAA  550

seq1  ACACCATGACCAGGGCAACTTATTAAACAAAGCATTTAATTTGGGAGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATGACCAGGGCAACTTATTAAACAAAGCATTTAATTTGGGAGCTC  600

seq1  ATCTTTTCAGGATGCTAAAGTTCATGACTCCCCTAGCAAGCAGTGTGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTCAGGATGCTAAAGTTCATGACTCCCCTAGCAAGCAGTGTGGCA  650

seq1  GCAGACAGACAAGCAGACAGGCAGATAGGCATACAGGCATGGCATTAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACAGACAAGCAGACAGGCAGATAGGCATACAGGCATGGCATTAGAG  700

seq1  TAGTAGCTAAGACCTTACACTTGATCCATAGGCAGAGAGAGAGAGAGAGA  750
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAGTAGCTAAGACCTTACACTTGATCCATA-GCAGAGAGAGAGAGAGAGA  749

seq1  GAGAGAGAGAGAGAGAGAG  769
      |||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAG  768