BAC Information

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BAC

Clone NameB6Ng01-166I18
Chromosome8 (Build37)
Map Location 103,626,030 - 103,626,889
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042078, LOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166I18.bB6Ng01-166I18.g
ACCDH958298DH958299
length1,183860
definitionDH958298|Mus musculus domesticus DNA, BAC clone: B6Ng01-166I18, 5' end.DH958299|Mus musculus domesticus DNA, BAC clone: B6Ng01-166I18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttggtcctggactgagcgattttcaaagtttgatttaataatt
cgagtggtgtgttttctttatgattctgatactaatctctgccaaatata
actggggcaagcagcgtcgcctattctttgtaattcttactcgaaattgt
tttactgcttcaaaaggtttggtcatttcatgaagtcgcattttgctaat
ttttggacttaactcttgtctaaggacatagacagaccctttattttctt
ctataatgaaaattaatgcctgctcgagggctcggcttcgttactaccca
tttctgtgttctgggttgtatgtttaagtctttgacacaatgggtcttgt
ttttatgcgaagtggagcattacttgactcttctgcatattaactttcaa
ttttcctggtaccatttgtcaaaaatgctctcttatcaacactccgagat
tctggcacttaaatgcacatttaaaaagtgtagttgaatgtatggatacc
tgtcttacgtgatgaattaattacgtttgtatcctaacgacggacacagc
tagtaactggatgtctactctgggggtctgtgcgagtgtgagtgttcgcc
tctgtgagcgtgcacctaccagatttcagaactctgaaatctggccagta
gagatatgactttaaggccaatcagtacatgcttgaggtctccttattat
atgactcaagcatatggtgtttttagaagtagtgtcttacaaactaggaa
tggagggtaaccatgaacaatggtactatgggaggaatagggaacagatg
aattgcattcaaagtggctccactgagacatgcatccctactgtgtgaaa
gaaaggtatctccctgagtatatggtaagcagatgttacatgaaagtcat
taaactccacccccccttcccaggaatacaggcatatctcaccatgcaca
gcttttaaatgattttgggctattacgttttatgcttgtgtaatagtgtt
tttctgactaagccatctcccccagaacctggaagcctcatttgaaatta
ttttacttacacaaaaatctaacaattcatacttctttaaagagagtttt
gccaatgatttttgactggaaccagcttaaacccacaagatactttaata
gacacaacgccatgtctggccctggccctcact
gaattcaataatgactgcctaattgcccatttgctctgaattgtgctaat
taatgcaagaatgatgctatactttcttagagccaaactcagattttcca
tagcaaaccatcactggtctatatactattaaaaactaagggtatagtgc
tgaaaaaaagcaagagatttttaaacaaaatcactttaattctctgggat
ttaacttgtcctgttttgtctttgttatctactttcgtttccatcatcag
gaaaataactactctggtattaatgcgactaacgcttgccaaaattactt
gtaactacttgaaactcataaaacacacacaccaactttgctataaactt
cctattttatcctatgaaaacgggcatgccccaccccacagtatgtgtgt
gtgtgtgtttttgtgtgtgtgtgtgtgtatacacatgtgcgtacacttgt
gactttgcttgcacatgtcagaagtctgtgtacttgtgtatgtttctgtc
tctttcactttatcaaagcactgacatgtgtacttccccacctggcattt
cacatgtatgttggagatatgatatcaagacttaatatagaggaatttta
atccagcaacatagcagctctggcaacagatcatatacatagtccctcca
agtctgcattatctggctgaaatacagacacacctttaactctaggtaac
agagggaagcagatctctgagatcgaggccagcctgggacagaacaagtt
ccaggcaaagaaaagcttatcatccatgcaatgttgactcccagaactct
ggacacacaggcacacagatctctcatttctagtcagtccaatccattga
agccagtgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103626030_103626889
seq2: B6Ng01-166I18.g_66_925 (reverse)

seq1  CTCACTGGC-TCAATGGATTGGACTGACTAGAAATGAGAGATCTGTGTGC  49
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGGCTTCAATGGATTGGACTGACTAGAAATGAGAGATCTGTGTGC  50

seq1  CTGTGTGTCCAGAGTTCTGGGAGTCCACCTTGCCTGGATG-TAAGCTTTT  98
      ||||||||||||||||||||||||| || |||| |||||| |||||||||
seq2  CTGTGTGTCCAGAGTTCTGGGAGTCAACATTGCATGGATGATAAGCTTTT  100

seq1  CTTTGCCTGGAACTTGTTCTGTCCCAGGCTGGCCTCGATCTCAGAGATCT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCTGGAACTTGTTCTGTCCCAGGCTGGCCTCGATCTCAGAGATCT  150

seq1  GCTTCCCTCTGTTACCTAGAGTTAAAGGTGTGTCTGTATTTCAGCCAGAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCTCTGTTACCTAGAGTTAAAGGTGTGTCTGTATTTCAGCCAGAT  200

seq1  AATGCAGACTTGGAGGGACTATGTATATGATCTGTTGCCAGAGCTGCTAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGACTTGGAGGGACTATGTATATGATCTGTTGCCAGAGCTGCTAT  250

seq1  GTTGCTGGATTAAAATTCCTCTATATTAAGTCTTGATATCATATCTCCAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGGATTAAAATTCCTCTATATTAAGTCTTGATATCATATCTCCAA  300

seq1  CATACATGTGAAATGCCAGGTGGGGAAGTACACATGTCAGTGCTTTGATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATGTGAAATGCCAGGTGGGGAAGTACACATGTCAGTGCTTTGATA  350

seq1  AAGTGAAAGAGACAGAAACATACACAAGTACACAGACTTCTGACATGTGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAAGAGACAGAAACATACACAAGTACACAGACTTCTGACATGTGC  400

seq1  AAGCAAAGTCACAAGTGTACGCACATGTGTATACACACACACACACACAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAGTCACAAGTGTACGCACATGTGTATACACACACACACACACAA  450

seq1  AAACACACACACACACATACTGTGGGGTGGGGCATGGACGTTTTCCTAGG  498
      ||||||||||||||||||||||||||||||||||||  ||||||| ||||
seq2  AAACACACACACACACATACTGTGGGGTGGGGCATGCCCGTTTTCATAGG  500

seq1  ATAAACTCGGATGTTTCTAGCAAAGTTGGTGTGTCTATTTTCTGACTCTC  548
      ||||| | ||| |||| ||||||||||||||||| | |||| ||| | ||
seq2  ATAAAATAGGAAGTTTATAGCAAAGTTGGTGTGTGTGTTTTATGAGTTTC  550

seq1  ATGCTGTTATAAGTAATTTTTGTTAGTGTTAGTCGCATTAATACCAGAGT  598
      | |  |||| |||||||||| |  || |||||||||||||||||||||||
seq2  AAGTAGTTACAAGTAATTTTGGCAAGCGTTAGTCGCATTAATACCAGAGT  600

seq1  ACTTATTTTCCTGATGATGGAAACGAAAGTAGATAACAAAGACAAAACAG  648
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTTTCCTGATGATGGAAACGAAAGTAGATAACAAAGACAAAACAG  650

seq1  GACTTAGTTAAATCCCAGAGAATTAAAGTGATTTTGTTCTAAAATCTCCT  698
      |||  |||||||||||||||||||||||||||||||||  |||||||| |
seq2  GAC-AAGTTAAATCCCAGAGAATTAAAGTGATTTTGTTTAAAAATCTCTT  699

seq1  GCTTTTTTACAGCACTATACCCTTTGTATTTAAAAGTATATAGATCTCGT  748
      |||||||| ||||||||||||||| || ||||| |||||||||| |    
seq2  GCTTTTTTTCAGCACTATACCCTTAGTTTTTAATAGTATATAGACCAGTG  749

seq1  ATGGTTTCTTATTAAAAATCAAAGTTTGGCTCTAAGAAAGAATAGCAAGA  798
      |||||||  |||  ||||||  |||||||||||||||||| ||||||  |
seq2  ATGGTTTGCTATGGAAAATCTGAGTTTGGCTCTAAGAAAGTATAGCATCA  799

seq1  CTCATGCATTAATTAAGTACAATTTAGAGGAAATGGGCAATTAGGCAGTC  848
       || |||||||||| || |||||| |||| ||||||||||||||||||||
seq2  TTCTTGCATTAATT-AGCACAATTCAGAGCAAATGGGCAATTAGGCAGTC  848

seq1  CTTCTTGAATTC  860
       || ||||||||
seq2  ATTATTGAATTC  860