BAC Information

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BAC

Clone NameB6Ng01-167B11
Chromosome8 (Build37)
Map Location 95,740,603 - 95,884,891
singlet/doubletdoublet
Overlap geneEs22, AU018778, Ces1, 2310039D24Rik
Upstream gene4933436C20Rik, Irx5, Irx6, LOC100041325, Mmp2, Aytl1, Capns2, LOC100040752, Slc6a2, EG244595, LOC382044, Es1, LOC676523, Ces3
Downstream geneCes7, Gnao1, Amfr, Nudt21, Ogfod1, Bbs2, Mt4, Mt3, Mt2, Mt1, Nup93, LOC100041555, Slc12a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167B11.bB6Ng01-167B11.g
ACCDH958682DH958683
length2791,151
definitionDH958682|Mus musculus domesticus DNA, BAC clone: B6Ng01-167B11, 5' end.DH958683|Mus musculus domesticus DNA, BAC clone: B6Ng01-167B11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,884,613 - 95,884,891)(95,740,603 - 95,741,764)
sequence
catcctggaggatgaggttaaaataggaaaaaatattgaactatattttg
ggtcttggtcatggttcagataaaagataaattggaaaatggggacagaa
ctggccagtggtcacatgtagagtaggtctcaaatgatgccttcaagagc
tgagatcatctgagccaaactcaggaagaaagaaacactctgttatgaga
cctggatgtagcgagagataaagggacctgctgcaggaggaggctgtgtt
tggaggggtgatagggagagaagtaggtt
gaattcatctgcactttcccttatctctgaggaaaacgagaccatttttc
ctcaaatattcagccacatgtttgaaaattatggtgatgggtttgtactc
tgatcagttctcagggagtgggcaggtcactgaggactcctagaagtttc
catagatccccacagcatctcccactccttgtctccacaccaagttgact
cctcatataatcagaatgtgtctgagacccctgtctccctgtctccctgg
ggaagcatctgtccacccctcctcacgaccgtctctccattcccacctgg
accctcagtcccagacactgctaccctttttattgggttttcgaagccac
aagactacttaagatgaccccctgactgctccaagtgctctagttccctc
aatgtatatgtctagcttggagccaaatagtggtgcccgaactacttcat
gcccttcccttttacgatctgtagtttactttcaaccttctccccccccc
cccgaacaaagtgaattgtatgttaatgtgctgtgcaaagagaaagagaa
ctcagtctcatgagaagaaaaataatatatagcaggtgcgtttttatggt
agggcataaaagtgcctcttagaagcagaggagtgtttggttcttagttt
tccgttgtctaatgctgagcaataaacatacaaacatgaatctaggcatt
gaaaacaaagttccccgtggctgggctatctggtctccaagggatcctat
cagcagatatcatacttagtaaggcctggtgccaggaatacttacaagaa
cagagacactttcacctcctgctgactctccaaagatggtcacagagcct
gggtcacctccaaatttagcaatgttgtcctggacccagtgtagtgcagc
cacctggtccaagtgaccccagttcccctgctgtgttcatcccctgtgct
gaaagaaccagggtaaaatagatttgtcatgagctagagtaagctggagc
tcttagtgaatagtgtggctctgcaggctaatacatgtcttcatcagcct
ctcatctcttttagcaatatgctactgggactctacactcatcttcccag
gagcagtgttgctagggctagttagggctctatctggaacaagaagtcaa
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_95884613_95884891
seq2: B6Ng01-167B11.b_54_332 (reverse)

seq1  AACCTACTTCTCTCCCTATCACCCCTCCAAACACAGCCTCCTCCTGCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACTTCTCTCCCTATCACCCCTCCAAACACAGCCTCCTCCTGCAGC  50

seq1  AGGTCCCTTTATCTCTCGCTACATCCAGGTCTCATAACAGAGTGTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCTTTATCTCTCGCTACATCCAGGTCTCATAACAGAGTGTTTCTT  100

seq1  TCTTCCTGAGTTTGGCTCAGATGATCTCAGCTCTTGAAGGCATCATTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGAGTTTGGCTCAGATGATCTCAGCTCTTGAAGGCATCATTTGA  150

seq1  GACCTACTCTACATGTGACCACTGGCCAGTTCTGTCCCCATTTTCCAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTACTCTACATGTGACCACTGGCCAGTTCTGTCCCCATTTTCCAATT  200

seq1  TATCTTTTATCTGAACCATGACCAAGACCCAAAATATAGTTCAATATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTTATCTGAACCATGACCAAGACCCAAAATATAGTTCAATATTTT  250

seq1  TTCCTATTTTAACCTCATCCTCCAGGATG  279
      |||||||||||||||||||||||||||||
seq2  TTCCTATTTTAACCTCATCCTCCAGGATG  279

seq1: chr8_95740603_95741764
seq2: B6Ng01-167B11.g_68_1218

seq1  GAATTCATCTGCACTTTCCCTTATCTCTGAGGAAAACGAGACCATTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGCACTTTCCCTTATCTCTGAGGAAAACGAGACCATTTTTC  50

seq1  CTCAAATATTCAGCCACATGTTTGAAAATTATGGTGATGGGTTTGTACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATATTCAGCCACATGTTTGAAAATTATGGTGATGGGTTTGTACTC  100

seq1  TGATCAGTTCTCAGGGAGTGGGCAGGTCACTGAGGACTCCTAGAAGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGTTCTCAGGGAGTGGGCAGGTCACTGAGGACTCCTAGAAGTTTC  150

seq1  CATAGATCCCCACAGCATCTCCCACTCCTTGTCTCCACACCAAGTTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATCCCCACAGCATCTCCCACTCCTTGTCTCCACACCAAGTTGACT  200

seq1  CCTCATATAATCAGAATGTGTCTGAGACCCCTGTCTCCCTGTCTCCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATATAATCAGAATGTGTCTGAGACCCCTGTCTCCCTGTCTCCCTGG  250

seq1  GGAAGCATCTGTCCACCCCTCCTCACGACCGTCTCTCCATTCCCACCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCATCTGTCCACCCCTCCTCACGACCGTCTCTCCATTCCCACCTGG  300

seq1  ACCCTCAGTCCCAGACACTGCTACCCTTTTTATTGGGTTTTCGAAGCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCAGTCCCAGACACTGCTACCCTTTTTATTGGGTTTTCGAAGCCAC  350

seq1  AAGACTACTTAAGATGACCCCCTGACTGCTCCAAGTGCTCTAGTTCCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTACTTAAGATGACCCCCTGACTGCTCCAAGTGCTCTAGTTCCCTC  400

seq1  AATGTATATGTCTAGCTTGGAGCCAAATAGTGGTGCCCGAACTACTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATATGTCTAGCTTGGAGCCAAATAGTGGTGCCCGAACTACTTCAT  450

seq1  GCCCTTCCCTTTTACGATCTGTAGTTTACTTTCAACCTTCTCCCCCCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTCCCTTTTACGATCTGTAGTTTACTTTCAACCTTCTCCCCCCCCC  500

seq1  CCCGAACAAAGTGAATTGTATGTTAATGTGCTGTGCAAAGAGAAAGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAACAAAGTGAATTGTATGTTAATGTGCTGTGCAAAGAGAAAGAGAA  550

seq1  CTCAGTCTCATGAGAAGAAAAATAATATATAGCAGGTGCGTTTTTATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTCTCATGAGAAGAAAAATAATATATAGCAGGTGCGTTTTTATGGT  600

seq1  AGGGCATAAAAGTGCCTCTTAGAAGCAGAGGAGTGTTTGGTTCTTAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATAAAAGTGCCTCTTAGAAGCAGAGGAGTGTTTGGTTCTTAGTTT  650

seq1  TCCGTTGTCTAATGCTGAGCAATAAACATACAAACATGAATCTAGGCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTTGTCTAATGCTGAGCAATAAACATACAAACATGAATCTAGGCATT  700

seq1  GAAAACAAAGTTCCCCGTGGCTGGGCTATCTGGTCTCCAAGGGATCCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAAAGTTCCCCGTGGCTGGGCTATCTGGTCTCCAAGGGATCCTAT  750

seq1  CAGCAGATATCATACTTAGTAAGGCCTGGTGCCAGGAATACTTACAAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGATATCATACTTAGTAAGGCCTGGTGCCAGGAATACTTACAAGAA  800

seq1  CAGAGACACTTTCACCTCCTGCTGACTCTCCAAAGATGGTCACAGAGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACACTTTCACCTCCTGCTGACTCTCCAAAGATGGTCACAGAGCCT  850

seq1  GGGTCACCTCCAAATTTAGCAATGTTGTCCTGGACCCAGTGTAGTGCAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCACCTCCAAATTTAGCAATGTTGTCCTGGACCCAGTGTAGTGCAGC  900

seq1  CACCTGGTCCAAGTGACCCCAGTTCCCCCTGCTGTGTTCATCCCCTGTGC  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CACCTGGTCCAAGTGACCCCAGTT-CCCCTGCTGTGTTCATCCCCTGTGC  949

seq1  TGAAAGAAACCAGGGTAAAAATAGATATGTCATGAGCTAGAAGTAAGCTG  1000
      |||||| ||||||||| ||||||||| ||||||||||||| |||||||| 
seq2  TGAAAG-AACCAGGGT-AAAATAGATTTGTCATGAGCTAG-AGTAAGCT-  995

seq1  GGAGCTCTTAGTGAAATAAGTTGTGCTCTGCAGGCCTAATACATGTCTTC  1050
      |||||||||||||||   |||   |||||||||| |||||||||||||||
seq2  GGAGCTCTTAGTGAA--TAGTGTGGCTCTGCAGG-CTAATACATGTCTTC  1042

seq1  ATCAGCCTCTCATCTC-TCTAGCAATATGCTATCTGGGACTCTACACTCA  1099
      |||||||||||||||| | ||||||||||||| |||||||||||||||| 
seq2  ATCAGCCTCTCATCTCTTTTAGCAATATGCTA-CTGGGACTCTACACTC-  1090

seq1  ATCTT-CCAGGAGCAGTGTTGCCTAGGAGCTAGTTAGTGCTC-ATCTGGA  1147
      ||||| ||||||||||||||| ||||| ||||||||| |||| |||||| 
seq2  ATCTTCCCAGGAGCAGTGTTG-CTAGG-GCTAGTTAGGGCTCTATCTGG-  1137

seq1  AACAAGACAGTCAAA  1162
      ||||||| |||||||
seq2  AACAAGA-AGTCAAA  1151