BAC Information

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BAC

Clone NameB6Ng01-167E06
Chromosome8 (Build37)
Map Location 102,972,433 - 103,033,120
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC667531, LOC100042069, LOC436054, LOC100042078
Downstream geneLOC100042086, LOC100042092, LOC384895
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167E06.bB6Ng01-167E06.g
ACCDH958809DH958810
length1,1921,155
definitionDH958809|Mus musculus domesticus DNA, BAC clone: B6Ng01-167E06, 5' end.DH958810|Mus musculus domesticus DNA, BAC clone: B6Ng01-167E06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,031,925 - 103,033,120)(102,972,433 - 102,973,604)
sequence
gaattcattttgtttccaattttagagagaaacacacacacacacacaca
catacacagagagagagagaaagagagagaacacaaacacaaagttgggt
cagtagggatagggaggtggataaatatgagaggagctgtgaaaaaggaa
caatatgatacaatatataaacatttatagataaaattttaaaaattaca
aaacaaaccaacttctctgctcccttattttacaaatatgttcctggtaa
catcaactattttgtaatatatttgagggtaactctttataagtatcaac
taagataacctgtggtggtttttttctttgtctgaccctgatgaaacatt
ctggtatgtttctatgctcagtaatataatcaagctttagaaagtacgag
gtgatggcattagctttatgtagaggaaatgttttgatccttagctacat
attaccaatttcaaggagcaacttcagagtggacactaagataacagctc
aattaaatttatgaatctcctaatattgtgtagagccaggaaacccttag
cagcatgaacatgttctaactaggtaatagcagatgattttattgaagga
aaaactctgtagatgacattcacacatatccagatgccataattcaatat
tgaagctttggagaatttgcaaataatgaaactgaatgtgtacagcctcg
gctagcatagcaaagcagcaattttttgcagtagattttatttgagtaga
cagaatacactctaaactactgataaaaataattactactggtattcaac
gcatgaaatttcatgttttatcagcttatattgttatgagttaggtaagt
ctgtttataccagttgtagaaacaacatacaatgaactactttacattac
tagtacagtaggtgataaacgtttttcgttccactataatatgggaagac
acaatatgagcataactcttcgttgaccataacgtggtcatgcaatatat
gtatttatgatgatgacttcaactttgtaacttacagacacatcagttat
catttattcaaatatgatgggtgtgacatattattttctcttctgattag
aggggttttataattaaattcttagtatataaataatattagtggagaaa
aaatttatactctcaaggtctgccaactcaagtgttttgtat
gaattctttccatttccattcacttttctgaaggcttaataattcacatt
ttcataaaagttgagtagaatcccattgtgtatacaccatattttcagaa
gtcttgctccactcccttgcttttgtgagttgggcaaaaacaaacatggg
cttatgaatttaagctgtagttttattatgataaaatgatattatacaca
ttgatttaaactgaactccaaacagtaaaaaaattttactagatttctat
tattcttatctcaaggatgctgaaattaaggaatatggacatatccactt
atgataatacattatacaaggcccgggtgcatgggttcagtgagaggcag
acttttggatgtcaaagaaacagatgctgggaggataccattatctcttt
ccagagtgagaagtgtatatccaagggactgaggtttgaaggggaaaata
taataacacattttagaaggatttggaagattatatagctaaaatgggta
aatataaatctcaagtggttaatcttggttaccatgaaaactcaatgtag
ttctctgagagaagaaagtgaagcaggtttcaaattaaggaggaaaaact
ataacagcataactattaatttttcagtgaacactggatctatatttcta
aataaaatgcttttaccttcttgtcaggttcttctgtatgctcccagcat
ttactttgtacctgaggctcacacaactgttcccttcactttaacacttt
agaaggaacatagcacatcttttccatcagggaaaatatttaaattctgt
atgtttaacataagcagagacatggaagcaaactaccctgctttcccaga
catgaaaggaaatattatgtttccaactgtgttcatttagcgttgtataa
ttcacaagtcaatcatttaaccattcagtaatgccagccagctactataa
acagataggggatggaaactgactggggggggtggtatgggggctttagt
tttgccacaaaaggcaaggatgtacatagattaaataccaatgcagctgg
ttaatctttggattacaacagtactatgcatactacccgtaccatataat
attcttatatccaaaaagagggatattatatttccacttccatgaaaaat
aaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103031925_103033120
seq2: B6Ng01-167E06.b_43_1234 (reverse)

seq1  ATAC-AAACACTTTGATTTGCAGACTTAGAG-TTATAAATTTTTTCT-CA  47
      |||| ||||||||   || |||||| | |||  |||||||||||||| ||
seq2  ATACAAAACACTTGAGTTGGCAGACCTTGAGAGTATAAATTTTTTCTCCA  50

seq1  CTAATATTAATTTATTATACTAAGGAATTAATTATAAAA-CCCTCTAATC  96
      |||||||| ||||| ||||||||| | |||||||||||| ||||||||||
seq2  CTAATATT-ATTTA-TATACTAAGAATTTAATTATAAAACCCCTCTAATC  98

seq1  AGAAGAG-AAATATATTGTCACA-CCATCATATTTGAATTAAATTGATTA  144
      ||||||| |||||   ||||||| |||||||||||||||  || ||| ||
seq2  AGAAGAGAAAATAATATGTCACACCCATCATATTTGAAT--AAATGA-TA  145

seq1  ACTGATGTGTCTTGTTAGGTTACAAAGTTTGAAGTCATCATCATAAATAC  194
      ||||||||||||   || ||||||||| ||||||||||||||||||||||
seq2  ACTGATGTGTCT--GTAAGTTACAAAG-TTGAAGTCATCATCATAAATAC  192

seq1  ATATATTGCATGACAACGTTATGGTCAACGAAGAGTTATGCTCATAATTG  244
      |||||||||||||| |||||||||||||||||||||||||||||| ||||
seq2  ATATATTGCATGACCACGTTATGGTCAACGAAGAGTTATGCTCAT-ATTG  241

seq1  TGTCTTACCATATTATAGTGGAACGAAAAACGTTTATCACCTACTGTACT  294
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCCCATATTATAGTGGAACGAAAAACGTTTATCACCTACTGTACT  291

seq1  AGTAATTGTAAAGTAGTTCATTGTATGTTGTTTCTACAACTGGTATAAAC  344
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAA-TGTAAAGTAGTTCATTGTATGTTGTTTCTACAACTGGTATAAAC  340

seq1  AGACTTACCTAACTCATAACAATATAAGCTGATAAAACATGAAATTTCAT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTACCTAACTCATAACAATATAAGCTGATAAAACATGAAATTTCAT  390

seq1  GCGTTGAATACCAGTAGTAATTATTTTTATCAGTAGTTTAGAGTGTATTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTGAATACCAGTAGTAATTATTTTTATCAGTAGTTTAGAGTGTATTC  440

seq1  TGTCTACTCAAATAAAATCTACTGCAAAAAATTGCTGCTTTGCTATGCTA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTACTCAAATAAAATCTACTGCAAAAAATTGCTGCTTTGCTATGCTA  490

seq1  GCCGAGGCTGTACACATTCAGTTTCATTATTTGCAAATTCTCCAAAGCTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAGGCTGTACACATTCAGTTTCATTATTTGCAAATTCTCCAAAGCTT  540

seq1  CAATATTGAATTATGGCATCTGGATATGTGTGAATGTCATCTACAGAGTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTGAATTATGGCATCTGGATATGTGTGAATGTCATCTACAGAGTT  590

seq1  TTTCCTTCAATAAAATCATCTGCTATTACCTAGTTAGAACATGTTCATGC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCAATAAAATCATCTGCTATTACCTAGTTAGAACATGTTCATGC  640

seq1  TGCTAAGGGTTTCCTGGCTCTACACAATATTAGGAGATTCATAAATTTAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAGGGTTTCCTGGCTCTACACAATATTAGGAGATTCATAAATTTAA  690

seq1  TTGAGCTGTTATCTTAGTGTCCACTCTGAAGTTGCTCCTTGAAATTGGTA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTGTTATCTTAGTGTCCACTCTGAAGTTGCTCCTTGAAATTGGTA  740

seq1  ATATGTAGCTAAGGATCAAAACATTTCCTCTACATAAAGCTAATGCCATC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAGCTAAGGATCAAAACATTTCCTCTACATAAAGCTAATGCCATC  790

seq1  ACCTCGTACTTTCTAAAGCTTGATTATATTACTGAGCATAGAAACATACC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCGTACTTTCTAAAGCTTGATTATATTACTGAGCATAGAAACATACC  840

seq1  AGAATGTTTCATCAGGGTCAGACAAAGAAAAAAACCACCACAGGTTATCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTTTCATCAGGGTCAGACAAAGAAAAAAACCACCACAGGTTATCT  890

seq1  TAGTTGATACTTATAAAGAGTTACCCTCAAATATATTACAAAATAGTTGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGATACTTATAAAGAGTTACCCTCAAATATATTACAAAATAGTTGA  940

seq1  TGTTACCAGGAACATATTTGTAAAATAAGGGAGCAGAGAAGTTGGTTTGT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACCAGGAACATATTTGTAAAATAAGGGAGCAGAGAAGTTGGTTTGT  990

seq1  TTTGTAATTTTTAAAATTTTATCTATAAATGTTTATATATTGTATCATAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAATTTTTAAAATTTTATCTATAAATGTTTATATATTGTATCATAT  1040

seq1  TGTTCCTTTTTCACAGCTCCTCTCATATTTATCCACCTCCCTATCCCTAC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTTTTTCACAGCTCCTCTCATATTTATCCACCTCCCTATCCCTAC  1090

seq1  TGACCCAACTTTGTGTTTGTGTTCTCTCTCTTTCTCTCTCTCTCTGTGTA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCAACTTTGTGTTTGTGTTCTCTCTCTTTCTCTCTCTCTCTGTGTA  1140

seq1  TGTGTGTGTGTGTGTGTGTGTTTCTCTCTAAAATTGGAAACAAAATGAAT  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTTTCTCTCTAAAATTGGAAACAAAATGAAT  1190

seq1  TC  1196
      ||
seq2  TC  1192

seq1: chr8_102972433_102973604
seq2: B6Ng01-167E06.g_66_1220

seq1  GAATTCTTTCCATTTCCATTCACTTTTCTGAAGGCTTAATAATTCACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCATTTCCATTCACTTTTCTGAAGGCTTAATAATTCACATT  50

seq1  TTCATAAAAGTTGAGTAGAATCCCATTGTGTATACACCATATTTTCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAAAGTTGAGTAGAATCCCATTGTGTATACACCATATTTTCAGAA  100

seq1  GTCTTGCTCCACTCCCTTGCTTTTGTGAGTTGGGCAAAAACAAACATGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGCTCCACTCCCTTGCTTTTGTGAGTTGGGCAAAAACAAACATGGG  150

seq1  CTTATGAATTTAAGCTGTAGTTTTATTATGATAAAATGATATTATACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGAATTTAAGCTGTAGTTTTATTATGATAAAATGATATTATACACA  200

seq1  TTGATTTAAACTGAACTCCAAACAGTAAAAAAATTTTACTAGATTTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTAAACTGAACTCCAAACAGTAAAAAAATTTTACTAGATTTCTAT  250

seq1  TATTCTTATCTCAAGGATGCTGAAATTAAGGAATATGGACATATCCACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTATCTCAAGGATGCTGAAATTAAGGAATATGGACATATCCACTT  300

seq1  ATGATAATACATTATACAAGGCCCGGGTGCATGGGTTCAGTGAGAGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATACATTATACAAGGCCCGGGTGCATGGGTTCAGTGAGAGGCAG  350

seq1  ACTTTTGGATGTCAAAGAAACAGATGCTGGGAGGATACCATTATCTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGGATGTCAAAGAAACAGATGCTGGGAGGATACCATTATCTCTTT  400

seq1  CCAGAGTGAGAAGTGTATATCCAAGGGACTGAGGTTTGAAGGGGAAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTGAGAAGTGTATATCCAAGGGACTGAGGTTTGAAGGGGAAAATA  450

seq1  TAATAACACATTTTAGAAGGATTTGGAAGATTATATAGCTAAAATGGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACACATTTTAGAAGGATTTGGAAGATTATATAGCTAAAATGGGTA  500

seq1  AATATAAATCTCAAGTGGTTAATCTTGGTTACCATGAAAACTCAATGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAATCTCAAGTGGTTAATCTTGGTTACCATGAAAACTCAATGTAG  550

seq1  TTCTCTGAGAGAAGAAAGTGAAGCAGGTTTCAAATTAAGGAGGAAAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGAGAGAAGAAAGTGAAGCAGGTTTCAAATTAAGGAGGAAAAACT  600

seq1  ATAACAGCATAACTATTAATTTTTCAGTGAACACTGGATCTATATTTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAGCATAACTATTAATTTTTCAGTGAACACTGGATCTATATTTCTA  650

seq1  AATAAAATGCTTTTACCTTCTTGTCAGGTTCTTCTGTATGCTCCCAGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATGCTTTTACCTTCTTGTCAGGTTCTTCTGTATGCTCCCAGCAT  700

seq1  TTACTTTGTACCTGAGGCTCACACAACTGTTCCCTTCACTTTAACACTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTGTACCTGAGGCTCACACAACTGTTCCCTTCACTTTAACACTTT  750

seq1  AGAAGGAACATAGCACATCTTTTCCATCAGGGAAAATATTTAAATTCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAACATAGCACATCTTTTCCATCAGGGAAAATATTTAAATTCTGT  800

seq1  ATGTTTAACATAAGCAGAGACATGGAAGCAAACTACCCTGCTTTCCCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAACATAAGCAGAGACATGGAAGCAAACTACCCTGCTTTCCCAGA  850

seq1  CATGAAAGGAAATATTATGTTTCCAACTGTGTTCATTTAGCGTTGTATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAGGAAATATTATGTTTCCAACTGTGTTCATTTAGCGTTGTATAA  900

seq1  TTCACAAGTCAATCATTTAACCATTCAGTAATGCCAGCCAGCTACTATAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAGTCAATCATTTAACCATTCAGTAATGCCAGCCAGCTACTATAA  950

seq1  ACAGATAGGGGATGGAAAACTGACT-GGGTGGGTGGTAT-GTGGCTTTAG  998
      ||||||||||||||| ||||||||| ||| ||||||||| | ||||||||
seq2  ACAGATAGGGGATGG-AAACTGACTGGGGGGGGTGGTATGGGGGCTTTAG  999

seq1  TTTTGCCACCAAAAGGCAAGGATGTACATAAGATTAAATACCAAATGCAA  1048
      |||||||| |||||||||||||||||||| |||||||||||| ||||| |
seq2  TTTTGCCA-CAAAAGGCAAGGATGTACAT-AGATTAAATACC-AATGC-A  1045

seq1  GCTGGTTTATTCTTTGGAATTACAACAGTACTATGCATTAACTACACGTA  1098
      ||||| ||| ||||||| ||||||||||||||||||||  ||||| ||||
seq2  GCTGG-TTAATCTTTGG-ATTACAACAGTACTATGCAT--ACTACCCGTA  1091

seq1  CCATATAATATTCTTATTATCCAAAAAGAAGGGATAATTTATAATTTCCA  1148
      |||||||||||||||| ||||||||||| |||||||  |||| |||||||
seq2  CCATATAATATTCTTA-TATCCAAAAAG-AGGGATA--TTAT-ATTTCCA  1136

seq1  CCTTCCATATGAAAAATTAAAATT  1172
       |||||  |||||||||  |||||
seq2  -CTTCC--ATGAAAAAT--AAATT  1155