BAC Information

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BAC

Clone NameB6Ng01-168B04
Chromosome8 (Build37)
Map Location 130,111,736 - 130,264,548
singlet/doubletdoublet
Overlap genePard3
Upstream geneIrf2bp2, Tomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, EG628847
Downstream geneNrp1, LOC668494, Itgb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168B04.bB6Ng01-168B04.g
ACCDH959407DH959408
length1,106139
definitionDH959407|Mus musculus domesticus DNA, BAC clone: B6Ng01-168B04, 5' end.DH959408|Mus musculus domesticus DNA, BAC clone: B6Ng01-168B04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,111,736 - 130,112,846)(130,264,410 - 130,264,548)
sequence
gaattcatcagttgcattaagcattcctttccctctgcaaactctctttg
ttcctctaaggagatgggtccagaattcaagctcacaagagagtatgact
aggttcaatttgtattggaaggagaaggtggactagtaggctgtaaggat
gagacccatttcagatatttggtacactttagtagccaccaggcattcct
tttggataccagaatctgtggatgcccaagttccttttataatgttaaag
aatatttgcatataaaaatctatgaacatatatgcccgtatactttaaat
cctgtctaggtttgtaacacctgacacccatgatccccatgtaaattacc
agtatgcttaattatgtacagactcagaataacaacagtttaaaagttac
taatgagctggtgaaatggctcagttggtaaaggtacttgttgccaagta
cctgagcagtggaaggaaaacgttggtctctctagcaccaagaggttgca
ttctcgcaattttaatgagtcgtttgataaagccccaaacttctaaaaag
ttaagggggcagagagattgcaaagaggttaagcacaccgacttttcttc
ctgagaacctgggttcaattcccaggacccacctgttgtctcaaccttct
gttaattccagtcccaggagatctgatgccctcctgtggcctctgtgggc
actgcatatacgtgatgcagtagtatgcctgcctgtcaaacatccataca
tataaaaacacatagtaaaaataaacaaaaaattaacagctgatcttaac
agcttccttcccacccccaatattttctacacatggcctgctgagcccca
ggaataactctatctccaaacccactgcatctgtccctcagactgccatt
cagagatcaaggggctgcagttgacatggtagaaataaatgacttaggaa
agcaaacagaaaacagcagtgcagaatataaagtagtggtagctactgac
tgccactgccctcttgtgtttggcttgtcttgatcaaaacaatacattta
gtcaatggtaaatttaagtaaataatatttttttatttctgtttttttgg
gcggtg
taggtcatccttggctacatagtgagttcaagaacagcctgggctatatg
agaccttgacagaaatgggatagagacagacagacagacacacacacaca
cagagagagagagagagagggagagaggggggagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_130111736_130112846
seq2: B6Ng01-168B04.b_46_1151

seq1  GAATTCATCAGTTGCATTAAGCATTCCTTTCCCTCTGCAAACTCTCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGTTGCATTAAGCATTCCTTTCCCTCTGCAAACTCTCTTTG  50

seq1  TTCCTCTAAGGAGATGGGTCCAGAATTCAAGCTCACAAGAGAGTATGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTAAGGAGATGGGTCCAGAATTCAAGCTCACAAGAGAGTATGACT  100

seq1  AGGTTCAATTTGTATTGGAAGGAGAAGGTGGACTAGTAGGCTGTAAGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAATTTGTATTGGAAGGAGAAGGTGGACTAGTAGGCTGTAAGGAT  150

seq1  GAGACCCATTTCAGATATTTGGTACACTTTAGTAGCCACCAGGCATTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCATTTCAGATATTTGGTACACTTTAGTAGCCACCAGGCATTCCT  200

seq1  TTTGGATACCAGAATCTGTGGATGCCCAAGTTCCTTTTATAATGTTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATACCAGAATCTGTGGATGCCCAAGTTCCTTTTATAATGTTAAAG  250

seq1  AATATTTGCATATAAAAATCTATGAACATATATGCCCGTATACTTTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGCATATAAAAATCTATGAACATATATGCCCGTATACTTTAAAT  300

seq1  CCTGTCTAGGTTTGTAACACCTGACACCCATGATCCCCATGTAAATTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTAGGTTTGTAACACCTGACACCCATGATCCCCATGTAAATTACC  350

seq1  AGTATGCTTAATTATGTACAGACTCAGAATAACAACAGTTTAAAAGTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCTTAATTATGTACAGACTCAGAATAACAACAGTTTAAAAGTTAC  400

seq1  TAATGAGCTGGTGAAATGGCTCAGTTGGTAAAGGTACTTGTTGCCAAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGCTGGTGAAATGGCTCAGTTGGTAAAGGTACTTGTTGCCAAGTA  450

seq1  CCTGAGCAGTGGAAGGAAAACGTTGGTCTCTCTAGCACCAAGAGGTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCAGTGGAAGGAAAACGTTGGTCTCTCTAGCACCAAGAGGTTGCA  500

seq1  TTCTCGCAATTTTAATGAGTCGTTTGATAAAGCCCCAAACTTCTAAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGCAATTTTAATGAGTCGTTTGATAAAGCCCCAAACTTCTAAAAAG  550

seq1  TTAAGGGGGCAGAGAGATTGCAAAGAGGTTAAGCACACCGACTTTTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGGGCAGAGAGATTGCAAAGAGGTTAAGCACACCGACTTTTCTTC  600

seq1  CTGAGAACCTGGGTTCAATTCCCAGGACCCACCTGTTGTCTCAACCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAACCTGGGTTCAATTCCCAGGACCCACCTGTTGTCTCAACCTTCT  650

seq1  GTTAATTCCAGTCCCAGGAGATCTGATGCCCTCCTGTGGCCTCTGTGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTCCAGTCCCAGGAGATCTGATGCCCTCCTGTGGCCTCTGTGGGC  700

seq1  ACTGCATATACGTGATGCAGTAGTATGCCTGCCTGTCAAACATCCATACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATATACGTGATGCAGTAGTATGCCTGCCTGTCAAACATCCATACA  750

seq1  TATAAAAACACATAGTAAAAATAAACAAAAAATTAACAGCTGATCTTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAACACATAGTAAAAATAAACAAAAAATTAACAGCTGATCTTAAC  800

seq1  AGCTTCCTTCCCACCCCCAATATTTTCTACACATGGCCTGCTGAGCCCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCTTCCCACCCCCAATATTTTCTACACATGGCCTGCTGAGCCCCA  850

seq1  GGAATAACTCTATCTCCAAACCCACTGCATCTGTCCCTCAGGACTGCCAT  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGAATAACTCTATCTCCAAACCCACTGCATCTGTCCCTCA-GACTGCCAT  899

seq1  TCAGAGATCAAGGGGCTGCAGTTGACATGGTAGAAATAAATGACTTAGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATCAAGGGGCTGCAGTTGACATGGTAGAAATAAATGACTTAGGA  949

seq1  AAGCAAACAGAAAACAGCAGTGCAGAATATAAAGTAGTGGTAGCTACTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAACAGAAAACAGCAGTGCAGAATATAAAGTAGTGGTAGCTACTGA  999

seq1  CTGCCAACTGCCCTCTTGTGTTTGGCTTGTCTTGGATCAAAACAATACAT  1050
      ||||| ||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTGCC-ACTGCCCTCTTGTGTTTGGCTTGTCTT-GATCAAAACAATACAT  1047

seq1  TAAGTCAATGGTTAAATTTAAGGTAAAATAATA-TTTATAATTTCTGTTT  1099
      | ||||||||| ||||||||||   |||||||| ||| | ||||||||||
seq2  TTAGTCAATGG-TAAATTTAAG--TAAATAATATTTTTTTATTTCTGTTT  1094

seq1  TTCTGGGCGGTG  1111
      || |||||||||
seq2  TTTTGGGCGGTG  1106

seq1: chr8_130264410_130264548
seq2: B6Ng01-168B04.g_76_214 (reverse)

seq1  TCTCTCTCCCCCCTCTCTCCCTCTCTCTCTCTCTCTCTGTGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCCCCCCTCTCTCCCTCTCTCTCTCTCTCTCTGTGTGTGTGTGT  50

seq1  GTCTGTCTGTCTGTCTCTATCCCATTTCTGTCAAGGTCTCATATAGCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTGTCTGTCTCTATCCCATTTCTGTCAAGGTCTCATATAGCCCA  100

seq1  GGCTGTTCTTGAACTCACTATGTAGCCAAGGATGACCTA  139
      |||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTCTTGAACTCACTATGTAGCCAAGGATGACCTA  139