BAC Information

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BAC

Clone NameB6Ng01-168O05
Chromosome8 (Build37)
Map Location 75,246,269 - 75,247,359
singlet/doubletsinglet
Overlap geneSin3b
Upstream geneFcho1, EG665991, LOC665996, LOC385024, LOC675190, Zfp709, LOC670453, Zfp617, BC049349, Cyp4f18, LOC666033, Olfr372, Olfr373, Olfr374, Tpm4, Rab8a, Hsh2d, Cib3, 2510049I19Rik, Ap1m1, LOC384840, LOC100042405, Klf2, Eps15l1, Calr3, LOC100042421, 1700030K09Rik, Cherp, Slc35e1, Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1
Downstream geneF2rl3, Large, LOC100039001, LOC666134
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168O05.bB6Ng01-168O05.g
ACCDH960011DH960012
length1,0531,149
definitionDH960011|Mus musculus domesticus DNA, BAC clone: B6Ng01-168O05, 5' end.DH960012|Mus musculus domesticus DNA, BAC clone: B6Ng01-168O05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtccacatggctcttgaatggatgctgctcacctacagcccat
tgctgtatcaacctcacagaatagacattcagaaacttgttccagaaagc
accagagccttgcaaatatcactattgaggtcttgggtcaacacagacat
ctaagcttgttttccctctctctctttttgagacaaggtcaacacctaac
tgtcatttttttttttaaagatgcagtcttttttctttttttttttttaa
gttttatttatttaatgtatttgagtacactacagtgaaggttgtgagcc
ttcatgtgactgctgggaattgaattttaggacctctgctcgctcctgcc
aaccctgctcgctcctgcccaaagacttacttatgattataaataagtaa
actgtagctgtcttcagatgcaccagaagaaggcgtcagatctcattacg
agtggttgtgagccaccatgtatttgctgggatttgaactaaggaccttc
ggaagagcagtcggtgctcttaccgttgagcgttgagccatctctccagc
ccctagagatgcagtcttaactatgtaccccagtttaggttagacctctc
agtggtctcctctcagactccccggtactgagatcacaagcgagcctgca
cactgaaatgtgaagtttatagaattaatgcgttttgaaatattcttcaa
ctttgctttactttctttccctccaacaaaacaaatcaaaaaacacttta
ggccttccaggtggccacagacccccagggcacataagttgagaaagacc
tcccgccccgtccagcaaggcccttatgtggacactcccctatttgacgc
cacgagtctccaccccctaggaggcggggcccgcgcaagcgcgaccaggc
tcagcgagcgggcagaagcgctctgacttcacatgcgcatgcagcagcga
gctcgcgggcggggatcgtgctccgctgggtcgtcggctcgagcacgaga
gctgcgtgcacgtggtgatgtctagcctcttctggactcgacccgcggga
tgg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaagtacccaaggagctaaaggatcttcaaccctat
aggtggacacattatgactaccagtaccctgactctgactctagctgcat
ttgtatcaaagatgctagtcgcatcactgaaagagagcccatttgactcg
caacttgtgtgtctcgtaaggtcctcaggtccaacggaatgatgtgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_75246269_75247359
seq2: B6Ng01-168O05.b_48_1100

seq1  GAATTCAGTCCACATGGCTCTTGAATGGATGCTGCTCACCTACAGCCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCCACATGGCTCTTGAATGGATGCTGCTCACCTACAGCCCAT  50

seq1  TGCTGTATCAACCTCACAGAATAGACATTCAGAAACTTGTTCCAGAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTATCAACCTCACAGAATAGACATTCAGAAACTTGTTCCAGAAAGC  100

seq1  ACCAGAGCCTTGCAAATATCACTATTGAGGTCTTGGGTCAACACAGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGCCTTGCAAATATCACTATTGAGGTCTTGGGTCAACACAGACAT  150

seq1  CTAAGCTTGTTTTCCCTCTCTCTCTTTTTGAGACAAGGTCAACACCTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCTTGTTTTCCCTCTCTCTCTTTTTGAGACAAGGTCAACACCTAAC  200

seq1  TGTCATTTTTTTTTTTAAAGATGCAGTCTTTTTTCTTTTTTTTTTTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTTTTTTTTTAAAGATGCAGTCTTTTTTCTTTTTTTTTTTTTAA  250

seq1  GTTTTATTTATTTAATGTATTTGAGTACACTACAGTGAAGGTTGTGAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTTATTTAATGTATTTGAGTACACTACAGTGAAGGTTGTGAGCC  300

seq1  TTCATGTGACTGCTGGGAATTGAATTTTAGGACCTCTGCTCGCTCCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTGACTGCTGGGAATTGAATTTTAGGACCTCTGCTCGCTCCTGCC  350

seq1  AACCCTGCTCGCTCCTGCCCAAAGACTTACTTATGATTATAAATAAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGCTCGCTCCTGCCCAAAGACTTACTTATGATTATAAATAAGTAA  400

seq1  ACTGTAGCTGTCTTCAGATGCACCAGAAGAAGGCGTCAGATCTCATTACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGCTGTCTTCAGATGCACCAGAAGAAGGCGTCAGATCTCATTACG  450

seq1  AGTGGTTGTGAGCCACCATGTATTTGCTGGGATTTGAACTAAGGACCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTGTGAGCCACCATGTATTTGCTGGGATTTGAACTAAGGACCTTC  500

seq1  GGAAGAGCAGTCGGTGCTCTTACCGTTGAGCGTTGAGCCATCTCTCCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGCAGTCGGTGCTCTTACCGTTGAGCGTTGAGCCATCTCTCCAGC  550

seq1  CCCTAGAGATGCAGTCTTAACTATGTACCCCAGTTTAGGTTAGACCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGAGATGCAGTCTTAACTATGTACCCCAGTTTAGGTTAGACCTCTC  600

seq1  AGTGGTCTCCTCTCAGACTCCCCGGTACTGAGATCACAAGCGAGCCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCTCCTCTCAGACTCCCCGGTACTGAGATCACAAGCGAGCCTGCA  650

seq1  CACTGAAATGTGAAGTTTATAGAATTAATGCGTTTTGAAATATTCTTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAATGTGAAGTTTATAGAATTAATGCGTTTTGAAATATTCTTCAA  700

seq1  CTTTGCTTTACTTTCTTTCCCTCCAACAAAACAAATCAAAAAACACTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTTTACTTTCTTTCCCTCCAACAAAACAAATCAAAAAACACTTTA  750

seq1  GGCCTTCCAGGTGGCCACAGACCCCCAGGGCACATAAGTTGAGAAAGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCCAGGTGGCCACAGACCCCCAGGGCACATAAGTTGAGAAAGACC  800

seq1  TCCCGCCCCGTCCAGCAAGGCCCTTATGTGGACACTCCCCTATTTGACGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGCCCCGTCCAGCAAGGCCCTTATGTGGACACTCCCCTATTTGACGC  850

seq1  CACGAGTCTCCACCCCCTAGGAGGCGGGGCCCGCGCAAGCGCGACCAGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CACGAGTCTCCACCCCCTAGGAGGCGGGGCCCGCGCAAGCGCGACCA-GG  899

seq1  CTCAGGCGGAGGCGGGGCAGAAGCGGCTCTGACTTCCAACATGGCGCATG  950
      |||||   |||   |||||||||| |||||||||||  |||| |||||||
seq2  CTCAG--CGAG--CGGGCAGAAGC-GCTCTGACTTC--ACAT-GCGCATG  941

seq1  CAGGCAGCGGAGGCTCCGCGGGCCGGGGATTCGGTGGCTCCCGCTGGGGT  1000
      || ||||||   ||| |||||| |||||| |||   ||| ||||| ||||
seq2  CA-GCAGCG--AGCT-CGCGGG-CGGGGA-TCG--TGCT-CCGCT-GGGT  981

seq1  CGTTCGGGCTCCGGAGGGCACGAGAAGCTGCCGGTGCACGTGAGTGATGT  1050
      |||   |||||    | ||||||| ||||||  ||||||||| |||||||
seq2  CGT--CGGCTC----GAGCACGAG-AGCTGC--GTGCACGTG-GTGATGT  1021

seq1  CCTTAGCCTCTTCCTGGGGACTCGGACCCCCGCGGGGATGG  1091
      |  ||||||||||    |||||||    ||||| |||||||
seq2  C--TAGCCTCTTC---TGGACTCG---ACCCGC-GGGATGG  1053