BAC Information

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BAC

Clone NameB6Ng01-173B18
Chromosome8 (Build37)
Map Location 129,177,216 - 129,297,582
singlet/doubletdoublet
Overlap genenone
Upstream gene4933403G14Rik, 2310079N02Rik, E330039K12Rik, BC021891, Kcnk1, Slc35f3, LOC668434, 1810063B05Rik, EG619653, Irf2bp2
Downstream geneTomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, Pard3, EG628847
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173B18.bB6Ng01-173B18.g
ACCGA001549GA001550
length1,137896
definitionB6Ng01-173B18.b B6Ng01-173B18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,177,216 - 129,178,330)(129,296,699 - 129,297,582)
sequence
gaattctctctgtgtgattctactgcggtcagagttgaaaatggttgtaa
tgtagcatcgaagccagaggactgactgcacagaactcctgtgtctcaga
ggactgtggagtctggaaaggagttctcagacttagtggagctcataaga
gtttcagcatggcaagggccgtggagcagattctcattgtgttgctcagg
ggccaccatatgccacatgccacagtctagcttaccagagaccaaatcaa
ggcctcagaagtaaccaggatgggctgttcccacagttaggaggtaaaat
atgtgtgaagtgatctgtgttcaccatctcagctctagagaggtggagct
aagcgtagccttggaggtttgctagctagccaggttacacacaccccagt
gagagagccgatccccaaagagatgattcctgaggaaaaacaccagatgt
tgacctctgaccttcccgtgcatgcacacgcgtgatgcacacgcacttca
aaatccacttaaggattttttacgctcctgttatttgatctgccgtaaat
gctgtaagtccatcttaattctgtgtcctattgaatagcaaatagcggtt
cataatcttcaacacaacatttgatgtgcttgcagtccaatttctctgtc
agccttcatagcttcagactaaacaatacaattctgatttgcatacgttc
cctccgggattattgagaaaggggtggcgggggcccatttccgtgcattt
gaagtatggggaacgtgatccctctaaatcacagtcaattggccagattt
tcacttgaataaattcaggtaccatttagttcacaaagataattttgact
ttcaggatttacagctacacctctcgtcgacagcaatcttccttgccgtc
ccccttccccacgcagccccctccgaccctcgttttcttaacgactctca
agatccacattgctgcactttaaaattgacgaaccaaggtaaaatattga
atgggaaatccactggctgcatttaaaattgccatgggggaagtcttttg
caaaactaggagaaataattcaagacatttctcctaagaaaatatcggaa
tgggtagaaccgagccatggtatggggagggatggtg
gaattcatgtggtgtgagagcaggagaggctctctggggaaaggaaagtg
ccagacagatggggcaggcagcagagcggcaaataggaacgaaatataag
ctggatatgacagcacatgcctctgatcccagcactctggacatgggagc
aggaggatcagaagttctaggtcatccgttgctacaagagttcatggcca
acctgagcgacatcatacctcaaaaccataaacgaaagaatgtaacataa
tgatgtgcacatatcacaatgtcacggcgaaagccatttcttgcctgcta
tcttagaaaaagtcaatatgataggggctggagagatggctcatcaggta
aagcatttgtctcttaagcttgatgactggagtttgaacccccaggacct
gtgtatatgctaggttgacatgatgtcctgccgtaatttttgcctcagca
ggaagacagaaatgagattcccagagtaagcctgttagcaaggaccccac
ctccactccaaatacttggctggacaatggcaggcaggttgggactgcgc
ccttggagagcagcaggtgctggtggctctgagtggctgtcacagcatct
tgtgacagccacatgagttcacaccatgaggcagcctctttttacccctg
gttgctctatcctggtggcccaaggtcaaagtctttggtcttgggtctgt
gcactgtgcctccttgcccatgtccctgaccgcactgatggagcatgcga
aggaagcagcagatgtctctcctccgctcgacattgacggcgggcagcac
ttcagagtctcctgggggcctcggacaaattgactgttacagggacagga
taatggtgattatacccaagacctgcccgtttgttagggccggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_129177216_129178330
seq2: B6Ng01-173B18.b_42_1178

seq1  GAATTCTCTCTGTGTGATTCTACTGCGGTCAGAGTTGAGAATGGTTGTAA  50
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAATTCTCTCTGTGTGATTCTACTGCGGTCAGAGTTGAAAATGGTTGTAA  50

seq1  TGTAGCATCGAAGCCAGAGGACTGACTGCACAGAACTCCTGTGTCTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCATCGAAGCCAGAGGACTGACTGCACAGAACTCCTGTGTCTCAGA  100

seq1  GGACTGTGGAGTCTGGAAAGGAGTTCTCAGACTTAGTGGAGCTCATAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTGGAGTCTGGAAAGGAGTTCTCAGACTTAGTGGAGCTCATAAGA  150

seq1  GTTTCAGCATGGCAAGGGCCGTGGAGCAGATTCTCATTGTGTTGCTCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGCATGGCAAGGGCCGTGGAGCAGATTCTCATTGTGTTGCTCAGG  200

seq1  GGCCACCATATGCCACATGCCACAGTCTAGCTTACCAGAGACCAAATCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACCATATGCCACATGCCACAGTCTAGCTTACCAGAGACCAAATCAA  250

seq1  GGCCTCAGAAGTAACCAGGATGGGCTGTTCCCACAGTTAGGAGGTAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCAGAAGTAACCAGGATGGGCTGTTCCCACAGTTAGGAGGTAAAAT  300

seq1  ATGTGTGAAGTGATCTGTGTTCACCATCTCAGCTCTAGAGAGGTGGAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGAAGTGATCTGTGTTCACCATCTCAGCTCTAGAGAGGTGGAGCT  350

seq1  AAGCGTAGCCTTGGAGGTTTGCTAGCTAGCCAGGTTACACACACCCCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGTAGCCTTGGAGGTTTGCTAGCTAGCCAGGTTACACACACCCCAGT  400

seq1  GAGAGAGCCGATCCCCAAAGAGATGATTCCTGAGGAAAAACACCAGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGCCGATCCCCAAAGAGATGATTCCTGAGGAAAAACACCAGATGT  450

seq1  TGACCTCTGACCTTCCCGTGCATGCACACGCGTGATGCACACGCACTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCTGACCTTCCCGTGCATGCACACGCGTGATGCACACGCACTTCA  500

seq1  AAATCCACTTAAGGATTTTTTACGCTCCTGTTATTTGATCTGCCGTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCACTTAAGGATTTTTTACGCTCCTGTTATTTGATCTGCCGTAAAT  550

seq1  GCTGTAAGTCCATCTTAATTCTGTGTCCTATTGAATAGCAAATAGCGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAAGTCCATCTTAATTCTGTGTCCTATTGAATAGCAAATAGCGGTT  600

seq1  CATAATCTTCAACACAACATTTGATGTGCTTGCAGTCCAATTTCTCTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCTTCAACACAACATTTGATGTGCTTGCAGTCCAATTTCTCTGTC  650

seq1  AGCCTTCATAGCTTCAGACTAAACAATACAATTCTGATTTGCATACGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCATAGCTTCAGACTAAACAATACAATTCTGATTTGCATACGTTC  700

seq1  CCTCCGGGATTATTGAGAAAGGGGTGGCGGGGGCCCATTTCCGTGCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCGGGATTATTGAGAAAGGGGTGGCGGGGGCCCATTTCCGTGCATTT  750

seq1  GAAGTATGGGGAACGTGATCCCTCTAAATCACAGTCAATTGGCCAGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATGGGGAACGTGATCCCTCTAAATCACAGTCAATTGGCCAGATTT  800

seq1  TCACTTGAATAAAATTCAGGTACCATTTAGTTCACAAAGATAA-TTTGAC  849
      |||||||||| |||||||||||||||||||||||||||||||| ||||||
seq2  TCACTTGAAT-AAATTCAGGTACCATTTAGTTCACAAAGATAATTTTGAC  849

seq1  -TTCAGGATTTACAGCTACACCTCTCGTCGACAGCAATCTTCCTTGCCGT  898
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGATTTACAGCTACACCTCTCGTCGACAGCAATCTTCCTTGCCGT  899

seq1  CCCCC-TCCCCACGCAGCCCCCTCCGACCCTCG-TTTCTT-ACGACTCTC  945
      ||||| ||||||||||||||||||||||||||| |||||| |||||||||
seq2  CCCCCTTCCCCACGCAGCCCCCTCCGACCCTCGTTTTCTTAACGACTCTC  949

seq1  AAGATCCACAATGCTGCAC-TTAAAAATGACGAACCAAGGGTAAAATA-T  993
      |||||||||| |||||||| |||||| ||||||||||| ||||||||| |
seq2  AAGATCCACATTGCTGCACTTTAAAATTGACGAACCAA-GGTAAAATATT  998

seq1  GA--TGGAAAT-CAC-GGCTGCATTAAAAAT--GCAT-GGGGAAGTC-TT  1035
      ||   |||||| ||| ||||||||| |||||   ||| ||||||||| ||
seq2  GAATGGGAAATCCACTGGCTGCATTTAAAATTGCCATGGGGGAAGTCTTT  1048

seq1  TGC-AAACTAGGGAGAATATATC-AGACATTTCTCTT---AGAATATCGG  1080
      ||| ||||||||   ||||  || ||||||||||| |   | |||||| |
seq2  TGCAAAACTAGGAGAAATAATTCAAGACATTTCTCCTAAGAAAATATC-G  1097

seq1  GAAAGGGTAG-ACCGAGCCATGG---AGGGAGGGA-GGTG  1115
      ||| |||||| ||||||||||||    |||||||| ||||
seq2  GAATGGGTAGAACCGAGCCATGGTATGGGGAGGGATGGTG  1137

seq1: chr8_129296699_129297582
seq2: B6Ng01-173B18.g_68_963 (reverse)

seq1  CCACCGG-CCTAACCAACTGGCAGGTCCTGCGTAT-ATCACCATTATCCC  48
      ||||||| |||||| ||| |||||||| || |||| ||||||||||||| 
seq2  CCACCGGCCCTAACAAACGGGCAGGTCTTGGGTATAATCACCATTATCCT  50

seq1  GTCCCTGTAACAGTC-ATTTGTCCGAGG-CCCCAGGAGACTCTG-AGTGC  95
      ||||||||||||||| |||||||||||| ||||||||||||||| |||||
seq2  GTCCCTGTAACAGTCAATTTGTCCGAGGCCCCCAGGAGACTCTGAAGTGC  100

seq1  TG-CCGCCGTCAATGTCGAGCGGAGGAGAGACATCTGCTGCTTCC-TCGC  143
      || |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGCCCGCCGTCAATGTCGAGCGGAGGAGAGACATCTGCTGCTTCCTTCGC  150

seq1  ATGCTCCATCAGTGCGGTCAGGGACAT-GGCAAGGAGGCACAGTGCACAG  192
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATGCTCCATCAGTGCGGTCAGGGACATGGGCAAGGAGGCACAGTGCACAG  200

seq1  ACCC-AGACC-AAGACTTTGACCTTGGGCCACCAGGATAGAGCAACCAGG  240
      |||| ||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGACCAAAGACTTTGACCTTGGGCCACCAGGATAGAGCAACCAGG  250

seq1  G--TAAAAGAGGCTGCCTCATGGTGTGAACTCATGTGGCTGTCACAAGAT  288
      |   ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAAAGAGGCTGCCTCATGGTGTGAACTCATGTGGCTGTCACAAGAT  300

seq1  GCTGTGACAGCCACTCAGAGCCACCAGCACCTGCTGCTCTCCAAGGGCGC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGACAGCCACTCAGAGCCACCAGCACCTGCTGCTCTCCAAGGGCGC  350

seq1  AGTCCCAACCTGCCTGCCATTGTCCAGCCAAGTATTTGGAGTGGAGGTGG  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAACCTGCCTGCCATTGTCCAGCCAAGTATTTGGAGTGGAGGTGG  400

seq1  GGTCCTTGCTAACAGGCTTACTCTGGGAATCTCATTTCTGTCTTCCTGCT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTGCTAACAGGCTTACTCTGGGAATCTCATTTCTGTCTTCCTGCT  450

seq1  GAGGCAAAAATTACGGCAGGACATCATGTCAACCTAGCATATACACAGGT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAAAATTACGGCAGGACATCATGTCAACCTAGCATATACACAGGT  500

seq1  CCTGGGGGTTCAAACTCCAGTCATCAAGCTTAAGAGACAAATGCTTTACC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGGTTCAAACTCCAGTCATCAAGCTTAAGAGACAAATGCTTTACC  550

seq1  TGATGAGCCATCTCTCCAGCCCCTATCATATTGACTTTTTCTAAGATAGC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGCCATCTCTCCAGCCCCTATCATATTGACTTTTTCTAAGATAGC  600

seq1  AGGCAAGAAATGGCTTTCGCCGTGACATTGTGATATGTGCACATCATTAT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGAAATGGCTTTCGCCGTGACATTGTGATATGTGCACATCATTAT  650

seq1  GTTACATTCTTTCGTTTATGGTTTTGAGGTATGATGTCGCTCAGGTTGGC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATTCTTTCGTTTATGGTTTTGAGGTATGATGTCGCTCAGGTTGGC  700

seq1  CATGAACTCTTGTAGCAACGGATGACCTAGAACTTCTGATCCTCCTGCTC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACTCTTGTAGCAACGGATGACCTAGAACTTCTGATCCTCCTGCTC  750

seq1  CCATGTCCAGAGTGCTGGGATCAGAGGCATGTGCTGTCATATCCAGCTTA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCCAGAGTGCTGGGATCAGAGGCATGTGCTGTCATATCCAGCTTA  800

seq1  TATTTCGTTCCTATTTGCCGCTCTGCTGCCTGCCCCATCTGTCTGGCACT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCGTTCCTATTTGCCGCTCTGCTGCCTGCCCCATCTGTCTGGCACT  850

seq1  TTCCTTTCCCCAGAGAGCCTCTCCTGCTCTCACACCACATGAATTC  884
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCCCCAGAGAGCCTCTCCTGCTCTCACACCACATGAATTC  896