BAC Information

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BAC

Clone NameB6Ng01-173G14
Chromosome8 (Build37)
Map Location 22,678,938 - 22,679,992
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041654, EG574083, AY761185, Defcr21, LOC100038926, Defcr23, LOC100041688, Defcr25, LOC626605, LOC634825, LOC100040619, LOC100038927, Defcr22, Defcr-rs7, LOC100041759, LOC672740, EG665969, LOC100041787, Defcr3, Defcr5, LOC100041811, Defcr-rs1, LOC100040668, LOC100041843, LOC100040678, EG665927, LOC100040693, Defcr20, LOC100041890, LOC100041895
Downstream geneEG626682, LOC100040706, EG665956, LOC635093, Defcr26, Defcr17, LOC100041952, Defcr-ps1, AY761184, LOC100040729, Defcr24, LOC100040739, Defb1, Defb50, Defb2, Defb10, Defb9, Defb11, Defb15, Defb35, Defb13, C86695, Ccdc70, Atp7b, Alg11, Nek5, Nek3, Ckap2, Vps36, Rpl30-ps2, Thsd1, Tpte, Slc25a15, LOC547006, Mrps31, AI316807, Slc20a2, LOC100040803
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173G14.bB6Ng01-173G14.g
ACCGA001764GA001765
length1,1251,055
definitionB6Ng01-173G14.b B6Ng01-173G14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatcgttccaagtcttttatcatgaatgggtgttggattttg
tcaaatgctttctcagcatctaacaggatgatcatgtggattttttcttt
gagtttctttatatagtggatttcattgatggatttccatatattaaacc
atccctgcatccctggaatgaagcctacttggtcatgatagattattgtt
ttgatgtgttctaggattccttagcgagaattttattgagtatttttaca
tcaatattcataggggaattgttctgaagttctctatctttgttgggtct
ttatgtggtttaggtatcagagtaattgtggcttcatagaatgaattggg
tagagtaccctctgtttctattttctggaatagtttgagaagaactggca
ttagatattccttgaatatctgatagaactctgcactaaagccatcttgt
cctgtgcttttatttttggttaggaggccattaatgactgcttcacgttc
tttaggggatataagaatttttaggtcattaatctgatcttgatttaact
ttggtacctggcatctgtctagaaatttgtccatttcatccatgttttcc
agttttgttgagtatatccttttgtagaaggatctgatggtattttggat
ttcttcaggatctgttgctatgtctctcttttcatttctgattttgttaa
ttaggatgctgtccctgtgccctctagtgagtctctctaagggtttatct
atcttgttgattttctcaaagaactagctcctcgtttggttgattctttg
aatagttctttttgtttccacttggttgattttgcccttgagtttgatta
tttccctttggtcctctcctcttgggtgaatatgcttccttttgttctag
agcttttaggtttgttgtcaagctgctagtatgtgctctctcttgtttct
ttttggaggcactcagagctatgagttttcctcttaggaatgctttcatt
ggtgtcataactttgggtatgttgggctaattttctttaaactctaaagt
ctctaaattcttaatttctttccttgacaagtatcattgagtaagagtgt
agttcagcttcacgtgcagatgctt
gaattcagtttctggaaacacccctgcttcagtattttcacaaaaatact
tgagaaccataaggaggaattctgattagaaaaattggttgattcagaaa
ataaaagtgttgccctacctttttttttttcttttcctgatggatcttat
atgattgcacaaagaatgtagggtagttctagaaaggctttgtagtctga
agttctagaaaaatgacaaacacttgctaatttttctcatattctagcaa
tcacaaaggccatacagccaacaccactaaatcccttcacatggacagag
acctgaaccacacatgggttgcacacttatcttgcatccccattatagaa
aactggatatacaaaaaataagaagttgttcaccaaagcaccccaaatag
gacaggaccatatgccacttatctagcatgtgctttcagagttaatcttc
agaaactaggtgaaaagatgaagtctgcacttcatcaatgcattgacaaa
acaaaggttgatattcaaaataatccacacaagtcacacattttatcatt
ttgaatgtaaatgaacatgctctcctatcctactgctgtgtaagatatca
ttacaagaagaaatggttttcaagcaacacacacatgtgttctaactcat
attttctatttggacattggtccatccatgggcccagagatgaatggtcc
tctaggatttagagtgtctgttgctgaaaaattctccatcatgtttagct
agtttatactgaggtacaggtgttaggaaggagccaagagctgagaacat
gtgtgcagaggacacccatccatcctggctcagtagggagggatcatcat
caacctgtgggaagtagagtgggtttttgatgaattatgtttgcaacatt
ataattcaaaaatatttccccaataaaggttacacataacaactactgtt
cttaccacgataagggccctcagtcttttcctgtggtttccccaacaaag
attcagagtctcaaaatatggcagatggctccagtgtgaacatctgcctt
tagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_22678938_22679992
seq2: B6Ng01-173G14.g_72_1126

seq1  GAATTCAGTTTCTGGAAACACCCCTGCTTCAGTATTTTCACAAAAATACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTCTGGAAACACCCCTGCTTCAGTATTTTCACAAAAATACT  50

seq1  TGAGAACCATAAGGAGGAATTCTGATTAGAAAAATTGGTTGATTCAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACCATAAGGAGGAATTCTGATTAGAAAAATTGGTTGATTCAGAAA  100

seq1  ATAAAAGTGTTGCCCTACCTTTTTTTTTTTCTTTTCCTGATGGATCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGTGTTGCCCTACCTTTTTTTTTTTCTTTTCCTGATGGATCTTAT  150

seq1  ATGATTGCACAAAGAATGTAGGGTAGTTCTAGAAAGGCTTTGTAGTCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGCACAAAGAATGTAGGGTAGTTCTAGAAAGGCTTTGTAGTCTGA  200

seq1  AGTTCTAGAAAAATGACAAACACTTGCTAATTTTTCTCATATTCTAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAGAAAAATGACAAACACTTGCTAATTTTTCTCATATTCTAGCAA  250

seq1  TCACAAAGGCCATACAGCCAACACCACTAAATCCCTTCACATGGACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAGGCCATACAGCCAACACCACTAAATCCCTTCACATGGACAGAG  300

seq1  ACCTGAACCACACATGGGTTGCACACTTATCTTGCATCCCCATTATAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAACCACACATGGGTTGCACACTTATCTTGCATCCCCATTATAGAA  350

seq1  AACTGGATATACAAAAAATAAGAAGTTGTTCACCAAAGCACCCCAAATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGATATACAAAAAATAAGAAGTTGTTCACCAAAGCACCCCAAATAG  400

seq1  GACAGGACCATATGCCACTTATCTAGCATGTGCTTTCAGAGTTAATCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGACCATATGCCACTTATCTAGCATGTGCTTTCAGAGTTAATCTTC  450

seq1  AGAAACTAGGTGAAAAGATGAAGTCTGCACTTCATCAATGCATTGACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTAGGTGAAAAGATGAAGTCTGCACTTCATCAATGCATTGACAAA  500

seq1  ACAAAGGTTGATATTCAAAATAATCCACACAAGTCACACATTTTATCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGTTGATATTCAAAATAATCCACACAAGTCACACATTTTATCATT  550

seq1  TTGAATGTAAATGAACATGCTCTCCTATCCTACTGCTGTGTAAGATATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGTAAATGAACATGCTCTCCTATCCTACTGCTGTGTAAGATATCA  600

seq1  TTACAAGAAGAAATGGTTTTCAAGCAACACACACATGTGTTCTAACTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGAAGAAATGGTTTTCAAGCAACACACACATGTGTTCTAACTCAT  650

seq1  ATTTTCTATTTGGACATTGGTCCATCCATGGGCCCAGAGATGAATGGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTATTTGGACATTGGTCCATCCATGGGCCCAGAGATGAATGGTCC  700

seq1  TCTAGGATTTAGAGTGTCTGTTGCTGAAAAATTCTCCATCATGTTTAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGATTTAGAGTGTCTGTTGCTGAAAAATTCTCCATCATGTTTAGCT  750

seq1  AGTTTATACTGAGGTACAGGTGTTAGGAAGGAGCCAAGAGCTGAGAACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATACTGAGGTACAGGTGTTAGGAAGGAGCCAAGAGCTGAGAACAT  800

seq1  GTGTGCAGAGGACACCCATCCATCCTGGCTCAGTAGGGAGGGATCATCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCAGAGGACACCCATCCATCCTGGCTCAGTAGGGAGGGATCATCAT  850

seq1  CAACCTGTGGGAAGTAGAGTGGGTTTTTGATGAATTATGTTTGCAAACAT  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAACCTGTGGGAAGTAGAGTGGGTTTTTGATGAATTATGTTTGC-AACAT  899

seq1  TATAAATC-AAAATATTTCCCCAATAAAGG-TACACATAACAACTACTGT  948
      ||||| || ||||||||||||||||||||| |||||||||||||||||||
seq2  TATAATTCAAAAATATTTCCCCAATAAAGGTTACACATAACAACTACTGT  949

seq1  TC-TACCACGATAAGGGCCCTCAGTTCTTTCCCTGTGGTTCCCCCAAC-A  996
      || ||||||||||||||||||||| ||||| ||||||||| ||||||| |
seq2  TCTTACCACGATAAGGGCCCTCAG-TCTTTTCCTGTGGTTTCCCCAACAA  998

seq1  AGATTCAGAGTTCCTCAAAATATGGCAGATGGGTTCCAGTGTGAACATCT  1046
      |||||||||||  ||||||||||||||||| || ||||||||||||||||
seq2  AGATTCAGAGT--CTCAAAATATGGCAGAT-GGCTCCAGTGTGAACATCT  1045

seq1  GCC-TTAGTT  1055
      ||| ||||||
seq2  GCCTTTAGTT  1055