BAC Information

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BAC

Clone NameB6Ng01-177D12
Chromosome8 (Build37)
Map Location 55,351,604 - 55,352,580
singlet/doubletsinglet
Overlap genenone
Upstream geneAga, Neil3, LOC100040107, Vegfc
Downstream geneSpcs3, Asb5, Spata4, Wdr17, Gpm6a, LOC667624, LOC100040156, LOC100040382, LOC100040392, EG546212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177D12.bB6Ng01-177D12.g
ACCGA004548GA004549
length9781,119
definitionB6Ng01-177D12.b B6Ng01-177D12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaacctacaagtgaaaactactctgtctccacactccttcctcc
caagtaaaatcttacatttgcagagcttctttgttttctatcattaagtt
ctataccatttagtatttcctctggccttaaaagtccagtagtcaccgag
ttgcctgacaatgactgagatagaacaagtagatagtgacagcaaagcca
ctgatggatgctcttcccatgaacacataagtcagggaaatgtcacagaa
acagaagggaaggtggcattcatgaagcatgacatgtgttgcagaattta
atcctcagagaaaggaagtttgctttagatttatgccacatgaaaaatag
aatagctgcttttcatatttcacccactatcagggattaattatttccct
ggtctttatgaccatttatgtcactcctgctgtagggtggagggtatgag
attgaaggatgattcattcaacatacacggtcagtgaaaagacacagaaa
agtggcttttggagactttccaaaaccaacatcaaggtgcatttctagga
gggccaccggtgagcagaccatgtcacttttctttttcactaaaaacact
ttctcgtgtgtttttctaaatcattactctctctgatacatctacatatc
gtgactgtctgaaaattctaccactttttctttgctagggaatcatttcc
aatcctccacatgtgttcctcaaagtattgtacgttgtatgtttgtgata
ctcaagcctaagaaagaaatcaatttatgattttttttctccataaaaag
aacaactagacaaaggactcttgtccataggacaaatgggaacccaacag
attgggaaaagatcttacgatcctacatctgataaggctaatatccaata
ttacaagaactcaatagtttagacttctggactcccaaataactcctatt
aaatgggggattccagagctatgacaga
gaattctcattctccattgctgggcttgacaactggttgagctactctag
aaactaatgtggcaagttcttgaaaagctaaaagtaaatctaccatatga
cccagttatataactccttggattttacccaaaggacttggctatatctg
ttgctttattcacagtagctaagaaacagaaaccatctaaatgtctgtca
actgattgttggataatgaaaatatggtacatatacacaatgaaattctt
ttgcactgtaaaacaaaaacgaaacatccagaaagtctcaaatttgtaga
tcaacaattgacactagagaaggttatattgactgaggtaatccaacctg
tgatggacaaaatgagaaaaatgttggagggaagggaggacaatacagat
ggagactgagggagaatagaaacataacactaaggatgcttgaaaaagca
atagagaaacatcatacatgtatgtatatatgaatctatattatagaata
tattatatatattgccatgctaattaaggtcaaagtctaccatcttccac
ataaattctgggctcagtgcaaaatggagtgacccccagtactagcagga
ctttcccttttctgaccataacttacacatatctctacctgaaaagtatc
acctagccttggttaacattacaggttcaattttctttctccagatcagt
aactgttcatctagtgcctgagatttctggaatgcatctctatactaatg
aggcatcttggtaccttaaactttcacacacagaattttgtggtgtttct
ttggtaatgacatcactaaagtaaggttattcactttattattcatatct
aatgaaactacttttgtatcaagtacttcattttgagaatatccagtaaa
gcatcagtagtgaatatgaatatttctcgaattcatcctaacgaaggaaa
aatatcttgataactatcatttatttccatagttatatccggaaagaagt
tctcttatacttggtaaactggctccaaaattgtttgaatatcaatgtct
tttcactaccagcatcttcatagctatgggatacccgtatcagtcatatt
catgcacgatatgatcgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_55351604_55352580
seq2: B6Ng01-177D12.b_46_1023

seq1  GAATTCTAACCTACAAGTGAAAACTACTCTGTCTCCACACTCCTTCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACCTACAAGTGAAAACTACTCTGTCTCCACACTCCTTCCTCC  50

seq1  CAAGTAAAATCTTACATTTGCAGAGCTTCTTTGTTTTCTATCATTAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAAAATCTTACATTTGCAGAGCTTCTTTGTTTTCTATCATTAAGTT  100

seq1  CTATACCATTTAGTATTTCCTCTGGCCTTAAAAGTCCAGTAGTCACCGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACCATTTAGTATTTCCTCTGGCCTTAAAAGTCCAGTAGTCACCGAG  150

seq1  TTGCCTGACAATGACTGAGATAGAACAAGTAGATAGTGACAGCAAAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGACAATGACTGAGATAGAACAAGTAGATAGTGACAGCAAAGCCA  200

seq1  CTGATGGATGCTCTTCCCATGAACACATAAGTCAGGGAAATGTCACAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGGATGCTCTTCCCATGAACACATAAGTCAGGGAAATGTCACAGAA  250

seq1  ACAGAAGGGAAGGTGGCATTCATGAAGCATGACATGTGTTGCAGAATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGGGAAGGTGGCATTCATGAAGCATGACATGTGTTGCAGAATTTA  300

seq1  ATCCTCAGAGAAAGGAAGTTTGCTTTAGATTTATGCCACATGAAAAATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCAGAGAAAGGAAGTTTGCTTTAGATTTATGCCACATGAAAAATAG  350

seq1  AATAGCTGCTTTTCATATTTCACCCACTATCAGGGATTAATTATTTCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTGCTTTTCATATTTCACCCACTATCAGGGATTAATTATTTCCCT  400

seq1  GGTCTTTATGACCATTTATGTCACTCCTGCTGTAGGGTGGAGGGTATGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTATGACCATTTATGTCACTCCTGCTGTAGGGTGGAGGGTATGAG  450

seq1  ATTGAAGGATGATTCATTCAACATACACGGTCAGTGAAAAGACACAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGGATGATTCATTCAACATACACGGTCAGTGAAAAGACACAGAAA  500

seq1  AGTGGCTTTTGGAGACTTTCCAAAACCAACATCAAGGTGCATTTCTAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTTTTGGAGACTTTCCAAAACCAACATCAAGGTGCATTTCTAGGA  550

seq1  GGGCCACCGGTGAGCAGACCATGTCACTTTTCTTTTTCACTAAAAACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCACCGGTGAGCAGACCATGTCACTTTTCTTTTTCACTAAAAACACT  600

seq1  TTCTCGTGTGTTTTTCTAAATCATTACTCTCTCTGATACATCTACATATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGTGTGTTTTTCTAAATCATTACTCTCTCTGATACATCTACATATC  650

seq1  GTGACTGTCTGAAAATTCTACCACTTTTTCTTTGCTAGGGAATCA-TTCC  699
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTGACTGTCTGAAAATTCTACCACTTTTTCTTTGCTAGGGAATCATTTCC  700

seq1  AATCCTCCACATGTGTTCCTCAAAGTATTGTACGTTGTATGTTTGTGATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCCACATGTGTTCCTCAAAGTATTGTACGTTGTATGTTTGTGATA  750

seq1  CTCAAGCCTAAGAAAGAAATCAATTTATGA-TTTTTTTCTCCATAAAAAG  798
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTCAAGCCTAAGAAAGAAATCAATTTATGATTTTTTTTCTCCATAAAAAG  800

seq1  AACAACTAGACAAAGGACTC-TGTCAATAGGACAAAATGGGAA-CCAACA  846
      |||||||||||||||||||| |||| ||||||| ||||||||| ||||||
seq2  AACAACTAGACAAAGGACTCTTGTCCATAGGAC-AAATGGGAACCCAACA  849

seq1  GATTGGGAAAAGATCTTTACGAATCCTACATCTGATAAAGGGCTAATATC  896
      ||||||||||||||| ||||| ||||||||||||||||  ||||||||||
seq2  GATTGGGAAAAGATC-TTACG-ATCCTACATCTGATAA--GGCTAATATC  895

seq1  CAATATATACAAAGAACTCAATAAGTTAGAC-TCCAGACACCCAAATAAC  945
      |||||| ||| ||||||||||||  |||||| ||  ||| ||||||||||
seq2  CAATAT-TAC-AAGAACTCAATAGTTTAGACTTCTGGACTCCCAAATAAC  943

seq1  -CCTATTAAAAATGGGGAT--CAGAGCTA-GACAGA  977
       |||||| |||  ||||||  |||||||| ||||||
seq2  TCCTATT-AAATGGGGGATTCCAGAGCTATGACAGA  978