BAC Information

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BAC

Clone NameB6Ng01-177H06
Chromosome8 (Build37)
Map Location 58,315,591 - 58,316,403
singlet/doubletsinglet
Overlap genenone
Upstream geneGm392, LOC100040212, Gm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356, LOC664916
Downstream geneAdam29, Glra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177H06.bB6Ng01-177H06.g
ACCGA004719GA004720
length8921,169
definitionB6Ng01-177H06.b B6Ng01-177H06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgactggctggctcaactcaactgttctggcaccaactattctc
ctagtctctaaactgcctgatttgatctggtttctctcagtttctcactg
aattgctttacttggccttaaactaactttgacaatttgttctaaccttc
tttgtcctttttattctctggcctcaactgcctctactgacttgcactga
acttcatgaactcaagagcaaattgaactccactgcactgcactcactgc
actgactcccaactgactcaactcaactcccaaggggtaaactcactgaa
cagaattgacaaactgtctctcactgcactactgttaaatagctttcctt
ctgacagttgggtgtatcctacatctgattaattctgtcaaatcttcttc
tgattcatcactttgtctgcccatcaattacacttcactggaaagttgtg
gacaaatggattccagccagaggtattaaaagtgtatattaatgacatgt
ttgcattcaacttgatcacacatacctaggtgtttgggtatgatcagagc
agccatgtttttcgattaaaatttctttacagttttgttttgagacagaa
cctgataaatttcccagtactcacatagtgtctcagaaatatccattaaa
tcctgttttgaagaattttgacacttaattgtcactttctttttttttca
ttttttattaggtatttagctcatttacatttccaatgctataccaaaag
tcccccatactcaacaaccccactctcctacccacccactcccccttttt
ggcccttggcgttccctgtactggggcatataaagtttgcaagtccaatg
ggccgactaagccatctttggattatatgcaggttgagtcaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
caggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaacacccatggaaggagttacagaaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccattatt
cagcttccaaatgcttgacaccattgcataacactagcagattttactga
agaacccagatgtagctgtctctttgttgagactatgccgggccttagca
aacacagaagtggatgctccacagtcagctaatggattggatacagggct
cccattggaaggacttagagaaagtccagagcttaggatcttcaccctat
aggccggacaactatttgactaaccagtacccttggagccttggacttca
gcgcaattgtatcaaagatgccctatcgcctcctggaagagtccatggac
ctgactttgtgtctcgtatacgaatcagcaatggcatcgctgctagctaa
ccgtcgcgtcgctgctagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58315591_58316403
seq2: B6Ng01-177H06.b_123_933

seq1  TTCTCTCAGTTTCTCACTGAATTGCTTTACTTGGCCTTAAACTAACTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCAGTTTCTCACTGAATTGCTTTACTTGGCCTTAAACTAACTTTG  50

seq1  ACAATTTGTTCTAACCTTCTTTGTCCTTTTTATTCTCTGGCCTCAACTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTGTTCTAACCTTCTTTGTCCTTTTTATTCTCTGGCCTCAACTGC  100

seq1  CTCTACTGACTTGCACTGAACTTCATGAACTCAAGAGCAAATTGAACTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTGACTTGCACTGAACTTCATGAACTCAAGAGCAAATTGAACTCC  150

seq1  ACTGCACTGCACTCACTGCACTGACTCCCAACTGACTCAACTCAACTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACTGCACTCACTGCACTGACTCCCAACTGACTCAACTCAACTCCC  200

seq1  AAGGGGTAAACTCACTGAACAGAATTGACAAACTGTCTCTCACTGCACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGTAAACTCACTGAACAGAATTGACAAACTGTCTCTCACTGCACTA  250

seq1  CTGTTAAATAGCTTTCCTTCTGACAGTTGGGTGTATCCTACATCTGATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAAATAGCTTTCCTTCTGACAGTTGGGTGTATCCTACATCTGATTA  300

seq1  ATTCTGTCAAATCTTCTTCTGATTCATCACTTTGTCTGCCCATCAATTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCAAATCTTCTTCTGATTCATCACTTTGTCTGCCCATCAATTAC  350

seq1  ACTTCACTGGAAAGTTGTGGACAAATGGATTCCAGCCAGAGGTATTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACTGGAAAGTTGTGGACAAATGGATTCCAGCCAGAGGTATTAAAA  400

seq1  GTGTATATTAATGACATGTTTGCATTCAACTTGATCACACATACCTAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATATTAATGACATGTTTGCATTCAACTTGATCACACATACCTAGGT  450

seq1  GTTTGGGTATGATCAGAGCAGCCATGTTTTTCGATTAAAATTTCTTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGTATGATCAGAGCAGCCATGTTTTTCGATTAAAATTTCTTTACA  500

seq1  GTTTTGTTTTGAGACAGAACCTGATAAATTTCCCAGTACTCACATAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGAGACAGAACCTGATAAATTTCCCAGTACTCACATAGTGT  550

seq1  CTCAGAAATATCCATTAAATCCTGTTTTGAAGAATTTTGACACTTAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAATATCCATTAAATCCTGTTTTGAAGAATTTTGACACTTAATTG  600

seq1  TCACTTTCTTTTTTTTTCATTTTTTATTAGGTATTTAGCTCATTTACATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTCTTTTTTTTTCATTTTTTATTAGGTATTTAGCTCATTTACATT  650

seq1  TCCAATGCTATACCAAAAGTCCCCCATACCCACCAACCCCCACTCCCCTA  700
      ||||||||||||||||||||||||||||| || ||| |||||||| ||||
seq2  TCCAATGCTATACCAAAAGTCCCCCATACTCAACAA-CCCCACTCTCCTA  699

seq1  CCCACCCACTCCCCCTTTTTGGCCC-TGGCGTTCCCCTGTACTGGGGCAT  749
      ||||||||||||||||||||||||| ||||||| ||||||||||||||||
seq2  CCCACCCACTCCCCCTTTTTGGCCCTTGGCGTT-CCCTGTACTGGGGCAT  748

seq1  ATAAAGTTTGCAAGTCCAATGGGCCGACTAGGCCATCTTTTGATACATAT  799
      |||||||||||||||||||||||||||||| ||||||||| |||  ||||
seq2  ATAAAGTTTGCAAGTCCAATGGGCCGACTAAGCCATCTTTGGAT-TATAT  797

seq1  GCAGCTAGAGTCAA  813
      |||| | |||||||
seq2  GCAGGTTGAGTCAA  811