MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-177P18
Chromosome	8 (Build37)
Map Location	128,394,326 - 128,540,767
singlet/doublet	doublet
Overlap gene	E330039K12Rik, BC021891, Kcnk1
Upstream gene	Gnpat, Exoc8, Gm505, Egln1, Tsnax, Disc1, Sipa1l2, 4933403G14Rik, 2310079N02Rik
Downstream gene	Slc35f3, LOC668434, 1810063B05Rik, EG619653, Irf2bp2, Tomm20, Rbm34, LOC100043368
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gnpat (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14712 MGI:1343460
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Exoc8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102058 MGI:2142527
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm505 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244666 MGI:2685351
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 4 Proteins

name	Egln1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:112405 MGI:1932286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tsnax (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53424 MGI:1855672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Disc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244667 MGI:2447658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Sipa1l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244668 MGI:2676970
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933403G14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74393 MGI:1921643
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310079N02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66566 MGI:1913816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E330039K12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270109 MGI:2445010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC021891 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234878 MGI:2385307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16525 MGI:109322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc35f3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210027 MGI:2444426
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668434 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668434
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 612 ESTs, 7 Proteins pseudo : _no_value

name	1810063B05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67892 MGI:1915142
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG619653 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619653 MGI:3648068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 84 ESTs, 7 Proteins

name	Irf2bp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270110 MGI:2443921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 228 ESTs, 10 Proteins

name	Tomm20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67952 MGI:1915202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm34 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52202 MGI:1098653
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043368 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043368
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 361 ESTs, 15 Proteins pseudo : _no_value

name	Gnpat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981733 GeneID:14712 MGI:1343460
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glyceronephosphate O-acyltransferase transcript_id : NM_010322.2

name	Exoc8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111160870 GeneID:102058 MGI:2142527
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exocyst complex component 8 transcript_id : NM_198103.2

name	Gm505 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259122 GeneID:244666 MGI:2685351
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 4 Proteins product : gene model 505, (NCBI) transcript_id : XM_001480455.1

name	Egln1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956235 GeneID:112405 MGI:1932286
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EGL nine homolog 1 (C. elegans) transcript_id : NM_053207.1

name	Tsnax (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130833 GeneID:53424 MGI:1855672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translin-associated factor X transcript_id : NM_016909.2

name	Disc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119874420 GeneID:244667 MGI:2447658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : disrupted in schizophrenia 1 transcript_id : NM_174854.2

name	Disc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119874422 GeneID:244667 MGI:2447658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : disrupted in schizophrenia 1 transcript_id : NM_174853.2

name	Sipa1l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487492 GeneID:244668 MGI:2676970
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal-induced proliferation-associated 1 like 2 transcript_id : NM_001081337.1

name	4933403G14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801814 GeneID:74393 MGI:1921643
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933403G14 gene transcript_id : NM_028908.2

name	2310079N02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380891 GeneID:66566 MGI:1913816
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310079N02 gene transcript_id : NM_025636.2

name	E330039K12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126352571 GeneID:270109 MGI:2445010
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E330039K12 gene transcript_id : NM_175561.3

name	BC021891 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119637820 GeneID:234878 MGI:2385307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC021891 transcript_id : NM_145608.2

name	Kcnk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680537 GeneID:16525 MGI:109322
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel, subfamily K, member 1 transcript_id : NM_008430.1

name	Slc35f3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126723625 GeneID:210027 MGI:2444426
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35, member F3 transcript_id : NM_175434.3

name	1810063B05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352059 GeneID:67892 MGI:1915142
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810063B05 gene transcript_id : NM_174987.3

name	EG619653 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383872 GeneID:619653 MGI:3648068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 83 ESTs, 7 Proteins product : predicted gene, EG619653, transcript variant 1 transcript_id : XM_883952.2

name	EG619653 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383873 GeneID:619653 MGI:3648068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 ESTs, 1 Protein product : predicted gene, EG619653, transcript variant 2 transcript_id : XM_895343.2

name	Irf2bp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383874 GeneID:270110 MGI:2443921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 228 ESTs, 9 Proteins product : interferon regulatory factor 2 binding protein 2, transcript variant 1 transcript_id : XM_284454.5

name	Tomm20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13324685 GeneID:67952 MGI:1915202
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocase of outer mitochondrial membrane 20 homolog (yeast) transcript_id : NM_024214.1

name	Rbm34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42794006 GeneID:52202 MGI:1098653
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein 34 transcript_id : NM_172762.2

name	Gnpat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981734 CCDS:CCDS22776.1 GeneID:14712 MGI:1343460
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005782 - peroxisomal matrix [Evidence TAS]; GO:0005778 - peroxisomal membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IDA]; GO:0016287 - glycerone-phosphate O-acyltransferase activity [Evidence IMP] [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0044255 - cellular lipid metabolism [Evidence IEA]; GO:0008611 - ether lipid biosynthesis [Evidence TAS] [Evidence IMP]; GO:0016044 - membrane organization and biogenesis [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : glyceronephosphate O-acyltransferase protein_id : NP_034452.2

name	Exoc8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37674218 CCDS:CCDS22777.1 GeneID:102058 MGI:2142527
definition	GO_component : GO:0000145 - exocyst [Evidence ISS] GO_function : GO:0035091 - phosphoinositide binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0017160 - Ral GTPase binding [Evidence ISS] GO_process : GO:0006887 - exocytosis [Evidence IEA] [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : exocyst complex component 8 protein_id : NP_932771.1

name	Gm505 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259123 GeneID:244666 MGI:2685351
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480505.1

name	Egln1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956236 GeneID:112405 MGI:1932286
definition	GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0031418 - L-ascorbic acid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016706 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0019538 - protein metabolism [Evidence IEA] codon_start : 1 product : EGL nine homolog 1 protein_id : NP_444437.1

name	Tsnax (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394490 CCDS:CCDS22778.1 GeneID:53424 MGI:1855672
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : translin-associated factor X protein_id : NP_058605.1

name	Disc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119874421 GeneID:244667 MGI:2447658
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : disrupted in schizophrenia 1 isoform 1 protein_id : NP_777279.2

name	Disc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119874423 GeneID:244667 MGI:2447658
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : disrupted in schizophrenia 1 isoform 2 protein_id : NP_777278.2

name	Sipa1l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487493 GeneID:244668 MGI:2676970
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : signal-induced proliferation-associated 1 like 2 protein_id : NP_001074806.1

name	4933403G14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859726 CCDS:CCDS22780.1 GeneID:74393 MGI:1921643
definition	codon_start : 1 product : hypothetical protein LOC74393 protein_id : NP_083184.1

name	2310079N02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385098 CCDS:CCDS22781.1 GeneID:66566 MGI:1913816
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66566 protein_id : NP_079912.1

name	E330039K12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126352572 GeneID:270109 MGI:2445010
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; pecanex-like 2 product : pecanex-like 2 isoform 2 protein_id : NP_780770.2

name	BC021891 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119637821 GeneID:234878 MGI:2385307
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : mixed lineage kinase 4 product : cDNA sequence BC021891 protein_id : NP_663583.2

name	Kcnk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680538 CCDS:CCDS22783.1 GeneID:16525 MGI:109322
definition	GO_component : GO:0005768 - endosome [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA] [Evidence IDA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IC]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : potassium channel, subfamily K, member 1 protein_id : NP_032456.1

name	Slc35f3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126723626 GeneID:210027 MGI:2444426
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : solute carrier family 35, member F3 protein_id : NP_780643.2

name	1810063B05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424683 GeneID:67892 MGI:1915142
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004129 - cytochrome-c oxidase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC67892 protein_id : NP_778152.1

name	EG619653 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82919584 GeneID:619653 MGI:3648068
definition	codon_start : 1 product : similar to thymidine kinase 1 isoform 1 protein_id : XP_889045.1

name	EG619653 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82919586 GeneID:619653 MGI:3648068
definition	codon_start : 1 product : similar to thymidine kinase 1 isoform 2 protein_id : XP_900436.1

name	Irf2bp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63579074 GeneID:270110 MGI:2443921
definition	codon_start : 1 product : similar to interferon regulatory factor 2 binding protein 2 isoform 1 protein_id : XP_284454.4

name	Tomm20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13324686 CCDS:CCDS22786.1 GeneID:67952 MGI:1915202
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005740 - mitochondrial envelope [Evidence IDA]; GO:0005742 - mitochondrial outer membrane translocase complex [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0019867 - outer membrane [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : translocase of outer mitochondrial membrane 20 homolog protein_id : NP_077176.1

name	Rbm34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42794007 CCDS:CCDS22787.1 GeneID:52202 MGI:1098653
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : RNA binding motif protein 34 protein_id : NP_766350.2

name	LOC668434 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259124 GeneID:668434
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 612 ESTs, 7 Proteins product : similar to ribosomal protein S2 pseudo : _no_value transcript_id : XR_034730.1

name	LOC100043368 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259125 GeneID:100043368
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 361 ESTs, 15 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_034746.1

clone name	MSMg01-534B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336K19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-347C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478B22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-376P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396C04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-279K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429D13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-539B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297B01
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-177P18.b	B6Ng01-177P18.g
ACC	GA005102	GA005103
length	1,058	366
definition	B6Ng01-177P18.b	B6Ng01-177P18.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(128,539,705 - 128,540,767)	(128,394,326 - 128,394,697)
sequence	gaattctcagccactaagatgtctgtcatggaaacattaggacccagact ccatcccaggcacccatgtgaagaatgggcacagtgccgtgcattgtaac ccgcagaggctgacaggtggatccctgggacctgctgtcttttcaggaca gctgagcagttttgccctccactttctccttaccatgatgttctccgtca cagcagaggtctaaaacaaagacggtgggttcatgagccaaaatagatct ttcctccttataagttgatggtcttaagattttgttacagtaatgggaga taagaggatatatacatgcacacacacacacacatacatatgtgtatata tagtgatggtttgtatatgctcagttcagggagtggcactattagaaggt gtagccctgctgcagtaggtgtggctttcttggaataggtgtgtcgctgt ggccatgggctttaagaccctcatcctagctgtctggaagccaatcttct tctgtctgcctttggatggagatgtagaactctcagcttgtcctgtacca tgcctgcctggatgctgccatgttcccgccttgatgataatggactgaac ctctgaacttgtaagccagccccaattaaatgttgttcttctaagggttg ccttggtcatggaatctggtcacagcagtaaaacactaagttatatttcc cctacaaattacaaaggactctatagctgagggtgatctaatgcaaaggc tttatgccttccatttacctaaaagcaaaatagaagttcacaagaacaaa cgtctttttttgacttcctgctgcctttcttcctaaaggctggaagtaaa tttcaaggcttcttttattgactcagactcaagaccagtgagtcttcagc tcttcccatgaatgtcttctcaccttggataacctgggacatgttacctg tgtcccatcaccccctaaatgtgttgttctttgggaaatactttcttcat gtgatacactgcatgctagctacctgactttccccctcaatccacccggt cgctatgg	cagcatttgggtgactaaggcagggggatagctggaagtctgaggctaat ctgggttacacagtatgaggctctgttccaaattggcatctctgctgggc tgggtgggacagggctgggtctggggtaaacggaaagtggttagagtccc tgtgttcctaacgttgtcctacccatctggggaagctgcaagaacaatcc aaggccagtgctgctttctcccagtgacagagaaagtatcgccggaaatt ccttatcctcaccagattgtaaaacaagtgttttctgcccccctggagac cttatcttttctgcctgtccttcccaaggctcccgactcaactgtgggat gggtgggaagggggtg
quality values	Open. Hide. 58 36 24 35 58 51 58 34 22 62 62 38 27 54 54 62 62 62 47 37 47 47 62 49 47 62 39 47 62 62 62 47 62 35 42 30 28 28 21 18 32 35 43 45 43 46 62 59 62 62 62 59 59 62 62 62 59 59 62 62 59 62 62 62 59 59 62 59 62 62 59 62 62 62 62 59 62 62 62 59 59 59 49 48 43 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 54 62 62 62 62 59 62 62 62 62 62 59 62 59 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 54 54 62 62 62 62 62 62 62 62 56 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 46 58 58 58 58 58 58 47 58 58 58 54 54 34 58 58 58 54 58 58 49 58 58 58 58 58 58 58 58 58 58 58 49 58 58 58 54 52 49 54 41 58 58 58 58 58 58 54 58 58 58 58 42 41 58 58 58 58 54 58 37 54 58 58 49 58 58 58 53 51 58 58 41 45 42 53 58 51 40 51 58 51 58 51 58 49 58 58 58 48 37 47 58 58 54 58 49 47 50 58 48 54 53 54 58 52 51 47 33 53 53 58 58 43 33 54 50 49 50 58 46 54 58 35 50 58 37 58 52 49 54 53 39 32 58 30 58 26 40 51 52 50 40 38 37 41 53 53 49 35 43 44 58 51 49 50 53 53 58 51 52 50 40 42 39 43 46 53 39 35 38 51 58 58 32 35 53 51 49 54 35 48 32 39 39 42 51 44 49 49 49 38 42 40 42 42 30 54 51 49 49 37 41 45 54 50 37 51 47 25 54 43 41 38 47 37 40 36 53 37 46 9 54 54 31 37 45 29 40 41 25 53 40 38 30 36 54 42 52 53 33 41 54 51 31 37 42 33 35 32 53 28 32 31 42 52 45 28 23 25 11 12 49 49 36 23 32 32 49 49 31 32 32 18 36 52 28 41 33 33 31 32 21 46 31 33 34 31 25 46 31 31 32 35 32 32 51 51 51 51 51 22 29 31 18 31 30 30 30 26 45 32 30 30 34 24 23 51 28 33 31 16 30 26 29 21 46 18 7 19 18 30 27 22 28 21 7 12 29 46 11 9 46 24 28 23 20 31 42 18 22 27 31 22 46 46 9 20 25 31 26 22 23 30 21 29 12 42 14 38 32 21 18 18 39 18 31 26 34 28 37 31 24 14 14 19 18 30 24 25 37 22 21 25 32 31 47 13 18 26 25 14 16 13 31 6 10 5 5 6 24 24 27 10 27 14 18 13 13 5 4 5 5 10 22 32 33 36 31 10 9 36 9 17 9 28 19 23 29 16 32 15 33 25 14 32 21 18 14 21 10 33 40 43 37 24 12 32 48 48 7 19 9 24 10 8 31 23 8 14 21 36 30 30 48 16 25 39 24 5 17 7 16 7 19 7 4 5 3 3 4 7 6 8 24 6 5 6 6 25 11 28 16 13 6 21 13 30 14 13 24 23 14 9 7 12 26 8 6 21 27 7 12 30 30 34 11 9 5 16 18 3 3 18 20 11 28 27 8 7 6 5 7 5 5 14 8 11 3	Open. Hide. 59 36 62 62 62 62 50 46 32 28 28 40 48 26 23 49 49 59 62 59 62 62 62 62 59 62 62 59 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 37 46 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 54 54 58 58 58 58 58 49 58 58 58 58 58 58 58 58 16 23

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_128539705_128540767
seq2: B6Ng01-177P18.b_45_1102 (reverse)

seq1  CCATAGCGA-CGGGTGGATTGAGGGGGAAAGTCCAGTTAGCTAAGCATGC  49
      ||||||||| |||||||||||||||||||||| ||| ||||| |||||||
seq2  CCATAGCGACCGGGTGGATTGAGGGGGAAAGT-CAGGTAGCT-AGCATGC  48

seq1  AGGTGTATCACATGGGAGAAAAGTATTTTCCCAAAGAACAACACATTTTA  99
      | |||||||||||  ||  |||||| ||||||||||||||||||||||  
seq2  A-GTGTATCACAT--GAAGAAAGTA-TTTCCCAAAGAACAACACATTT--  92

seq1  GGGGGGTGATGGGACACAGGTAACATTGTCCCAGG-TATCCAAGGTGAG-  147
       |||||||||||||||||||||||| ||||||||| ||||||||||||| 
seq2  AGGGGGTGATGGGACACAGGTAACA-TGTCCCAGGTTATCCAAGGTGAGA  141

seq1  AGACATTTCATGGGAAGAGCTGAAGACTCACTGGTCTTGAGTCTGAGTCA  197
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACA-TTCATGGGAAGAGCTGAAGACTCACTGGTCTTGAGTCTGAGTCA  190

seq1  AT-AAAGAAGCCTTGAAATTTACTTCCAGCCTTTAGGAAGAAAGGCAGCA  246
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAAGCCTTGAAATTTACTTCCAGCCTTTAGGAAGAAAGGCAGCA  240

seq1  GGAAGTC-AAAAAAGACGTTTGTTCTTGTGAACTTCTATTTTGCTTTTAG  295
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCAAAAAAAGACGTTTGTTCTTGTGAACTTCTATTTTGCTTTTAG  290

seq1  GTAAATGGAAGGCATAAAGCCTTTGCATTAGATCACCCTCAGCTATAGAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGGAAGGCATAAAGCCTTTGCATTAGATCACCCTCAGCTATAGAG  340

seq1  TCCTTTGTAATTTGTAGGGGAAATATAACTTAGTGTTTTACTGCTGTGAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGTAATTTGTAGGGGAAATATAACTTAGTGTTTTACTGCTGTGAC  390

seq1  CAGATTCCATGACCAAGGCAACCCTTAGAAGAACAACATTTAATTGGGGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCCATGACCAAGGCAACCCTTAGAAGAACAACATTTAATTGGGGC  440

seq1  TGGCTTACAAGTTCAGAGGTTCAGTCCATTATCATCAAGGCGGGAACATG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTACAAGTTCAGAGGTTCAGTCCATTATCATCAAGGCGGGAACATG  490

seq1  GCAGCATCCAGGCAGGCATGGTACAGGACAAGCTGAGAGTTCTACATCTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATCCAGGCAGGCATGGTACAGGACAAGCTGAGAGTTCTACATCTC  540

seq1  CATCCAAAGGCAGACAGAAGAAGATTGGCTTCCAGACAGCTAGGATGAGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAAAGGCAGACAGAAGAAGATTGGCTTCCAGACAGCTAGGATGAGG  590

seq1  GTCTTAAAGCCCATGGCCACAGCGACACACCTATTCCAAGAAAGCCACAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAAAGCCCATGGCCACAGCGACACACCTATTCCAAGAAAGCCACAC  640

seq1  CTACTGCAGCAGGGCTACACCTTCTAATAGTGCCACTCCCTGAACTGAGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCAGCAGGGCTACACCTTCTAATAGTGCCACTCCCTGAACTGAGC  690

seq1  ATATACAAACCATCACTATATATACACATATGTATGTGTGTGTGTGTGTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAACCATCACTATATATACACATATGTATGTGTGTGTGTGTGTG  740

seq1  CATGTATATATCCTCTTATCTCCCATTACTGTAACAAAATCTTAAGACCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATATATCCTCTTATCTCCCATTACTGTAACAAAATCTTAAGACCA  790

seq1  TCAACTTATAAGGAGGAAAGATCTATTTTGGCTCATGAACCCACCGTCTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTATAAGGAGGAAAGATCTATTTTGGCTCATGAACCCACCGTCTT  840

seq1  TGTTTTAGACCTCTGCTGTGACGGAGAACATCATGGTAAGGAGAAAGTGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAGACCTCTGCTGTGACGGAGAACATCATGGTAAGGAGAAAGTGG  890

seq1  AGGGCAAAACTGCTCAGCTGTCCTGAAAAGACAGCAGGTCCCAGGGATCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAAAACTGCTCAGCTGTCCTGAAAAGACAGCAGGTCCCAGGGATCC  940

seq1  ACCTGTCAGCCTCTGCGGGTTACAATGCACGGCACTGTGCCCATTCTTCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCAGCCTCTGCGGGTTACAATGCACGGCACTGTGCCCATTCTTCA  990

seq1  CATGGGTGCCTGGGATGGAGTCTGGGTCCTAATGTTTCCATGACAGACAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTGCCTGGGATGGAGTCTGGGTCCTAATGTTTCCATGACAGACAT  1040

seq1  CTTAGTGGCTGAGAATTC  1063
      ||||||||||||||||||
seq2  CTTAGTGGCTGAGAATTC  1058

seq1: chr8_128394326_128394697
seq2: B6Ng01-177P18.g_67_438

seq1  GAATTCCAGCATTTGGGTGACTAAGGCAGGGGGATAGCTGGAAGTCTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCATTTGGGTGACTAAGGCAGGGGGATAGCTGGAAGTCTGAG  50

seq1  GCTAATCTGGGTTACACAGTATGAGGCTCTGTTCCAAATTGGCATCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATCTGGGTTACACAGTATGAGGCTCTGTTCCAAATTGGCATCTCTG  100

seq1  CTGGGCTGGGTGGGACAGGGCTGGGTCTGGGGTAAACGGAAAGTGGTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTGGGTGGGACAGGGCTGGGTCTGGGGTAAACGGAAAGTGGTTAG  150

seq1  AGTCCCTGTGTTCCTAACGTTGTCCTACCCATCTGGGGAAGCTGCAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTGTGTTCCTAACGTTGTCCTACCCATCTGGGGAAGCTGCAAGAA  200

seq1  CAATCCAAGGCCAGTGCTGCTTTCTCCCAGTGACAGAGAAAGTATCGCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCAAGGCCAGTGCTGCTTTCTCCCAGTGACAGAGAAAGTATCGCCG  250

seq1  GAAATTCCTTATCCTCACCAGATTGTAAAACAAGTGTTTTCTGCCCCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCCTTATCCTCACCAGATTGTAAAACAAGTGTTTTCTGCCCCCCT  300

seq1  GGAGACCTTATCTTTTCTGCCTGTCCTTCCCAAGGCTCCCGACTCAACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACCTTATCTTTTCTGCCTGTCCTTCCCAAGGCTCCCGACTCAACTG  350

seq1  TGGGATGGGTGGGAAGGGGGTG  372
      ||||||||||||||||||||||
seq2  TGGGATGGGTGGGAAGGGGGTG  372

BAC Information

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Search Result

BAC

BAC End Information

Alignment Information