BAC Information

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BAC

Clone NameB6Ng01-178M15
Chromosome8 (Build37)
Map Location 64,681,131 - 64,682,084
singlet/doubletsinglet
Overlap genenone
Upstream geneSh3rf1, EG664975, Cbr4, Palld, LOC100040872, BC013672, Anxa10, LOC100040775
Downstream geneLOC384830, LOC100040804, LOC665267, Spock3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178M15.bB6Ng01-178M15.g
ACCGA005678GA005679
length9631,191
definitionB6Ng01-178M15.b B6Ng01-178M15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tcttgaaaaatttacatcttgaaaaaaaaagacatatacaaaacaattct
gtagctacatggctttaattaagggtttttagtaagttgcaaaatgtggt
acccatcaatatgggcttctcaaatctcatgatttaatgaatagatggca
ttgtacacctcacccccatcttcaagctgataaagtggctatacttttcc
tgaacttttctctgctactgagtatagcaatggtacaagtcagcttcatt
tttatgagatgtgaggctcaaggactgtattgaacttctctaaactagtg
taaacatgtagcccaggacttgttttggtttttgtttgtttttgtttgtt
tgttttgttttgttttgtttttcgagacggggtttctctgtatagccctg
gctgtcctggaattcactttgtagaccaggctggcctcgaactcagaaat
ctgcctgcctctgcctcccaagtgctgggattaaaggcatgtgccaccac
cactgcctggcaatgggctatttgttatagatagcaaggcaatgtcttaa
agacagattgattttagaaagacagcagtacaaattccttatgaatcctc
tctttcttccccacacccttttgagggaaatagctgtctactattgtcta
atacctctttaatattcccttggctcctggatcattttcttcaaccagtc
actttatgtgtctaaccctgccatcttcttagaagaactgggactgatat
accatatagctatgattcaataagacagacagcatgaagctctggaacag
actcatggatattcttttcttttttttaattaccatttttattagatatt
tttcttcatttacatttccaaatgctacccctaaagtcccctaaaaatgc
cccctcccccgatgctccctaactcacccaactcttgctttccttgtcct
ggcattccactgt
gaattcctcagattcatactgttctattagactctattcttgatatttac
atttctgattattgattatttcagactatcactttgaactgaaagttgtg
tgagcattcattgctcaattaaataattaaaatggattttcagaaagcat
caaattttcttagtaacattggggtgtgggatatcctactgggaattaga
gtttgggaaaacctgataaaatttttgtgggaatgaggatcctggtttac
attttaatgttgacaataaaattacaaagtagttctactttacctgagac
ttgattgtagttgttaaaatggtttcacaataatgtgaatgttccatgta
cgtacatacaccttataattttagtgaaattcactgtaacattctctacc
taacacaaagaatgctatctagtaactgaccaacaaagttggttgagggc
agttaccctctataaaaatttctgcaccactcctgacctcaggattgcaa
tgttccttcttcaccgtgaagacggtgcctttctatgtgacaggttaagt
cggtacatttcaacttcaatgcaagataaaagttcacaagacacagaatg
ataggacttatgagaaagaaccaagtttacaatattggctaaataagaca
tagtgtaatccattattttaataccttctgataaatagtaaggcaggcaa
tgatcagattttagcccctcacatttttattttcccctcatttaaggaga
agaaatttgtccaaatgagcctttcatgctccatttatatacctcattta
tatatctctgacactttgatttccaccacaggcaggtgaggtccaaatct
caagccccctccctgtgtctttcattcatctctacatgtgctcaaggttt
aaaaaaaaaaaactcacctcctcacgttctggtggacgcaattcttacaa
gttacaagttagtcctcttctgttaaacatggcattgacccaccaataaa
gggcggctgatgagagcagcgacatccgcgactcatcaggatcaacaaaa
accactgatgtcctctgctgtaaaatgaagcaaattgattattgatgctg
ctcttgacgcttcgattcttcgggttgctgcctggcctgaaggatatcct
atttaaccagcttgattttctctcggcacgagcttctggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_64681131_64682084
seq2: B6Ng01-178M15.b_54_1016

seq1  TCTTGAAAAATTTACATCTTGAAAAAAAAAGACATATACAAAACAATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAAAATTTACATCTTGAAAAAAAAAGACATATACAAAACAATTCT  50

seq1  GTAGCTACATGGCTTTAATTAAGGGTTTTTAGTAAGTTGCAAAATGTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTACATGGCTTTAATTAAGGGTTTTTAGTAAGTTGCAAAATGTGGT  100

seq1  ACCCATCAATATGGGCTTCTCAAATCTCATGATTTAATGAATAGATGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCAATATGGGCTTCTCAAATCTCATGATTTAATGAATAGATGGCA  150

seq1  TTGTACACCTCACCCCCATCTTCAAGCTGATAAAGTGGCTATACTTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACACCTCACCCCCATCTTCAAGCTGATAAAGTGGCTATACTTTTCC  200

seq1  TGAACTTTTCTCTGCTACTGAGTATAGCAATGGTACAAGTCAGCTTCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTTTCTCTGCTACTGAGTATAGCAATGGTACAAGTCAGCTTCATT  250

seq1  TTTATGAGATGTGAGGCTCAAGGACTGTATTGAACTTCTCTAAACTAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAGATGTGAGGCTCAAGGACTGTATTGAACTTCTCTAAACTAGTG  300

seq1  TAAACATGTAGCCCAGGACTTGTTTTGGTTTTTGTTTGTTTTTGTTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATGTAGCCCAGGACTTGTTTTGGTTTTTGTTTGTTTTTGTTTGTT  350

seq1  TGTTTTGTTTTGTTTTGTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTG  400
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGTTTTGTTTTGTTTTGTTTTTCGAGACGGGGTTTCTCTGTATAGCCCTG  400

seq1  GCTGTCCTGGAATTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTGGAATTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAAT  450

seq1  CTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGTGCCACCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGTGCCACCAC  500

seq1  CACTGCCTGGCAATGGGCTATTTGTTATAGATAGCAAGGCAATGTCTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCTGGCAATGGGCTATTTGTTATAGATAGCAAGGCAATGTCTTAA  550

seq1  AGACAGATTGATTTTAGAAAGACAGCAGTACAAATTCCTTATGAATCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGATTGATTTTAGAAAGACAGCAGTACAAATTCCTTATGAATCCTC  600

seq1  TCTTTCTT-CCCACACCCTTTTGAGGGAAATAGCTGTCTACTATTGTCTA  649
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTCCCCACACCCTTTTGAGGGAAATAGCTGTCTACTATTGTCTA  650

seq1  ATACCTCTTTAATATT-CCTTGGCTCCTGGATCATTTTCTTCAACCAGTC  698
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATACCTCTTTAATATTCCCTTGGCTCCTGGATCATTTTCTTCAACCAGTC  700

seq1  AC-TTATGTGTCTAACCCTGCCATCTTCTTAGAAGAACT-GGACTGATAT  746
      || |||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACTTTATGTGTCTAACCCTGCCATCTTCTTAGAAGAACTGGGACTGATAT  750

seq1  ACCATATAGCTATGATTCAATAAGACAGACAGCATGAAGCTCTGGAACAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATAGCTATGATTCAATAAGACAGACAGCATGAAGCTCTGGAACAG  800

seq1  ACTCATGGATATTCTTTTCTTTTTTTTAATTAACATTTTTATTAGATA-T  845
      |||||||||||||||||||||||||||||||| ||||||||||||||| |
seq2  ACTCATGGATATTCTTTTCTTTTTTTTAATTACCATTTTTATTAGATATT  850

seq1  TTTCTTCATTTACATTT-CAAATGCTATCCCTAAAGTCCCCT-AAAATGC  893
      ||||||||||||||||| ||||||||| |||||||||||||| |||||||
seq2  TTTCTTCATTTACATTTCCAAATGCTACCCCTAAAGTCCCCTAAAAATGC  900

seq1  CCCCTCCCCCGATGCTCCCTAACTCACCC-ACTCCTGC-TTCCTTGTCCT  941
      ||||||||||||||||||||||||||||| |||| ||| |||||||||||
seq2  CCCCTCCCCCGATGCTCCCTAACTCACCCAACTCTTGCTTTCCTTGTCCT  950

seq1  GGCATTCCACTGT  954
      |||||||||||||
seq2  GGCATTCCACTGT  963