BAC Information

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BAC

Clone NameB6Ng01-179F04
Chromosome8 (Build37)
Map Location 38,851,025 - 38,851,749
singlet/doubletsinglet
Overlap geneSgcz
Upstream geneA730069N07Rik, AI429214, LOC666877, LOC100041616, 1700016D18Rik, LOC641121, LOC621149
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179F04.bB6Ng01-179F04.g
ACCGA006075GA006076
length1,101732
definitionB6Ng01-179F04.b B6Ng01-179F04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctaccccattttaaattgggttatttgaatttc
tgaagtccagcttcttgagctctttgtatatattggatattagtccccta
tcagatttaagattggtaaaaatcctttcccaatctgttggtggcctttt
tgtcttattgagtgtctttttccttacacagctttgcagttttatgaggt
cccatttgtcaattcttgatcttagagcacaatccattgctgttctgttt
aggaatttttcccctgtgcccatatcttcgaggcttttccccactttctc
ctctattaatttcagtgtctctggttttatgttgaggtctttgatccact
tagacttgagctttgtacaaggagaaaagaatggatcaatttgcattctt
cgaaatgataaccaccagttgtatcagcaccatttgttgaaaatgctgtc
tttttgccactggatggttttagcttccttgtcaaagatcaagtgaccat
aggtgtgtgggttcatatctgggtcttcaattctattccattgatctact
tgtctttcactgtaccagtatcatgctgtttttctcacaattgctctgta
gtacagcttaatgtcaggcatggtgattcccctagaggttgttttattat
tgagattagtttttgcaatcctaggttttttattattccagataaattgg
caaattgtcctttccaactcagtgaagaatggagttggaattttgatggg
gattgcattgaatctgtatattgctttcagcaggatagacattcatacca
tgagcatgggagatattttcaatcttctgagatcttcttcaatttctttc
ttcagagacttgaagttcttatcatacagatctctcacttccttagttta
gagtccaccaatgtatttttaattattgtgactattgtgaaaggtgttgt
ttccctaacttctttctccgtcttttatcctttgtgtaaagaaagaccat
ttgatttgttttgagttaatttttatatccatttacctcactgaaagcta
ttccatcagggttagaaagtcccctgaatggaaattttttggaagtcact
t
gaattcatatgcctcatccacagaagatagagaaggcatgctagccctgg
atgcgcaacgctgggccgccacgctgttggcactgtagttatggtctgct
tttgggtcgatgctggcggttggagaccagctctcctgcagtctcacagc
actgggggcactgaacgcgctgccgaaactcctcttcttctgcagtgatg
ttttaagaggcagtggcttctcacattctaaaatctcttgttctattgaa
gtatttaaaagtatcattgcagtggctgcatcaatatcagattctttaag
agtttgcacttggctttgcttgagaacagagcttaagtagagaggtgata
aagaagcactttgtggagaagaaaaaggttgcttctttaaggcctgcata
agattgggcttatattctgcatcaacgcaccataaggagcctttttccat
taaccttgccatgacttctttccactttctgaaaacatttatttcaggga
cagattatgcagaacagattcttccagcctgtaagtgcagtggaaagtat
gggaagcatccccgaatccccgctgctattctcttgtaggggcaaacatt
tattttggccagtggttcattagccatataattgagaaagaactaacggg
agatgggggccttggaaattgctgattttttttctgggtttcgggagcac
cgatggtccaaaggatggaatctctatctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_38851025_38851749
seq2: B6Ng01-179F04.g_71_802

seq1  GAATTCATATGCCTCATCCACAGAAGATAGAGAAGGCATGCTAGCCCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGCCTCATCCACAGAAGATAGAGAAGGCATGCTAGCCCTGG  50

seq1  ATGCGCAACGCTGGGCCGCCACGCTGTTGGCACTGTAGTTATGGTCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGCAACGCTGGGCCGCCACGCTGTTGGCACTGTAGTTATGGTCTGCT  100

seq1  TTTGGGTCGATGCTGGCGGTTGGAGACCAGCTCTCCTGCAGTCTCACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTCGATGCTGGCGGTTGGAGACCAGCTCTCCTGCAGTCTCACAGC  150

seq1  ACTGGGGGCACTGAACGCGCTGCCGAAACTCCTCTTCTTCTGCAGTGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGGCACTGAACGCGCTGCCGAAACTCCTCTTCTTCTGCAGTGATG  200

seq1  TTTTAAGAGGCAGTGGCTTCTCACATTCTAAAATCTCTTGTTCTATTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGAGGCAGTGGCTTCTCACATTCTAAAATCTCTTGTTCTATTGAA  250

seq1  GTATTTAAAAGTATCATTGCAGTGGCTGCATCAATATCAGATTCTTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAAAAGTATCATTGCAGTGGCTGCATCAATATCAGATTCTTTAAG  300

seq1  AGTTTGCACTTGGCTTTGCTTGAGAACAGAGCTTAAGTAGAGAGGTGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCACTTGGCTTTGCTTGAGAACAGAGCTTAAGTAGAGAGGTGATA  350

seq1  AAGAAGCACTTTGTGGAGAAGAAAAAGGTTGCTTCTTTAAGGCCTGCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCACTTTGTGGAGAAGAAAAAGGTTGCTTCTTTAAGGCCTGCATA  400

seq1  AGATTGGGCTTATATTCTGCATCAACGCACCATAAGGAGCC-TTTTCCAT  449
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGATTGGGCTTATATTCTGCATCAACGCACCATAAGGAGCCTTTTTCCAT  450

seq1  TAACCTTGCCATGACTTCTTTCCACTTTCTGAAAACATTTA-TTCAGGGA  498
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAACCTTGCCATGACTTCTTTCCACTTTCTGAAAACATTTATTTCAGGGA  500

seq1  CAGATTATGCAGAACAGAATTCTTCCAGCCTGTAGGTGCAGTGGCAAAGT  548
      ||||||||||||||||| |||||||||||||||| ||||||||| |||||
seq2  CAGATTATGCAGAACAG-ATTCTTCCAGCCTGTAAGTGCAGTGG-AAAGT  548

seq1  ATGGGAAGCAATCCAGAAT-CCAGCTGTAAATTTCTTTGACGGGCAAACA  597
      ||||||||||  || |||| || ||||  | | ||||  | |||||||||
seq2  ATGGGAAGCATCCCCGAATCCCCGCTGCTATTCTCTTGTAGGGGCAAACA  598

seq1  TTTA-TTTGGCAAGT-GTTCAATAGCCATATAAATGAGAA--GACTAA-G  642
      |||| |||||| ||| ||||| ||||||||||| ||||||   ||||| |
seq2  TTTATTTTGGCCAGTGGTTCATTAGCCATATAATTGAGAAAGAACTAACG  648

seq1  GGAGTATGGGGG-CTTTGAAGTTGCTGATTTTTTTTTCTGGGTTCTGGTA  691
      |||| ||||||| ||| ||| ||||||| |||||||||||||||  || |
seq2  GGAG-ATGGGGGCCTTGGAAATTGCTGA-TTTTTTTTCTGGGTTTCGGGA  696

seq1  GCA-CGATGGTCCAAAGGATGGCATCTC-ATCTCCC  725
      ||| |||||||||||||||||| ||||| |||||||
seq2  GCACCGATGGTCCAAAGGATGGAATCTCTATCTCCC  732