BAC Information

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BAC

Clone NameB6Ng01-180D18
Chromosome8 (Build37)
Map Location 122,919,768 - 123,123,791
singlet/doubletdoublet
Overlap geneGse1, 4833427B12Rik, LOC668301
Upstream geneMlycd, Osgin1, Efcbp2, Gm587, Mbtps1, Hsdl1, Lrrc50, Taf1c, EG628061, 4930403J07Rik, Kcng4, Wfdc1, Atp2c2, 4632415K11Rik, Cotl1, BC025816, Usp10, Crispld2, Zdhhc7, 6430548M08Rik, 1700120B06Rik
Downstream gene1190005I06Rik, Cox4nb, Cox4i1, Irf8, LOC100042333, Foxf1a, Mthfsd, Foxc2, Foxl1, 1700018B08Rik, Fbxo31, Map1lc3b, Zcchc14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180D18.bB6Ng01-180D18.g
ACCGA006729GA006730
length721812
definitionB6Ng01-180D18.b B6Ng01-180D18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,919,768 - 122,920,487)(123,123,055 - 123,123,791)
sequence
gaattccacgaatagattttgcttatgttcatttctctaccaagctcgta
ttcttctaccatcccgaccctaacaccatggtttttggcttttaattatt
ttttttctaaattggttctcgtttaacttatcaatttttaatcttgaggg
aatgggtgtccttaagtatgtctgtgtaccacatgtgtgcctggtgtcca
gaggagccagaagagggcaccagagcccctgagacagagttacaggtggt
tgtgagctgctgtgtgggttctgggaaccagactttggtcctcaaaagag
cagccagtgctcttaactgctgagacatttctgcagtccagcacattagt
ttttgggggtgtttgtttgttgttttttaagacaggtcctctcagtggcc
aaaggctgatgggccagcaagctccagggaccagcctgtctctgtctcct
cccacagaaccattccctaatttttcatgtgggtgctgggatttgaactc
aggccgtcccacttgccctgcaagaggtttatcagctgctctgtctcctc
agtcccagagctgggcgtgtttcaccccacaagactacagcgatcagctc
agaatgtaagctgaggacaaatctctcccttgggcatctcacagtgcaag
gcagaaaccaaggacagggaactgataaacagcagacacacggctggaaa
tgagagggtcagaagaaccca
gaattctctaggctggcttcaaactcacagagatgcccccgcctcagctt
cccaagagctgagattaaaggagtaaaccaccacgccctattttcctttc
cttttttttttttttttttttttggtcttttcccctttcgtttctaaact
ttaattttgtcaactatttaattcctatcgatgtttgtccactgtacaca
tgcaattccagaagaggccagaagagggcaccatatcccccgagactgga
gttgcagctggctgtgcgccaccattgtgggactgaacttgagtcctctg
caagagcagccaatgctcataactactgaacctgctttcctgtccccacc
ccgccccaccccaccttaccccacacctctttaggggacaggttctcact
atgtatctgagggggttcaagaccagtctgggctaccaggcgatactatc
tcctataaacccaacaaaacaaagcaaagtgagcccagcatctggggcct
gggttcaggcctgaaatcttagcgctctgagagactgaggaaggaagaga
gactcaaacgtcaaaacgccggggctggaggggtgctcagaggttaagag
tccttcttgcagagagctcacgaccatctgtaacgggagttccagggtat
ctgataccctcatacagactctaagaacaccagaacatacatgtaagcaa
acccacatttttatttttgttgtttctatacagggtctctctatgtagcc
ctggctgccctgcaactctctatgtagatcgggctagactcaaattcaca
gagaatccacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_122919768_122920487
seq2: B6Ng01-180D18.b_38_758

seq1  GAATTCCACGAATAGATTTTGCTTATGTTCATTTCTCTACC-ATCTCGTA  49
      ||||||||||||||||||||||||||||||||||||||||| | ||||||
seq2  GAATTCCACGAATAGATTTTGCTTATGTTCATTTCTCTACCAAGCTCGTA  50

seq1  TTCTTCTACCATCCCGACCCTAACACCATGGTTTTTGGCTTTTAATTATT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTACCATCCCGACCCTAACACCATGGTTTTTGGCTTTTAATTATT  100

seq1  TTTTTTCTAAATTGGTTCTCGTTTAACTTATCAATTTTTAATCTTGAGGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTAAATTGGTTCTCGTTTAACTTATCAATTTTTAATCTTGAGGG  150

seq1  AATGGGTGTCCTTAAGTATGTCTGTGTACCACATGTGTGCCTGGTGTCCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTGTCCTTAAGTATGTCTGTGTACCACATGTGTGCCTGGTGTCCA  200

seq1  GAGGAGCCAGAAGAGGGCACCAGAGCCCCTGAGACAGAGTTACAGGTGGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCCAGAAGAGGGCACCAGAGCCCCTGAGACAGAGTTACAGGTGGT  250

seq1  TGTGAGCTGCTGTGTGGGTTCTGGGAACCAGACTTTGGTCCTCAAAAGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCTGCTGTGTGGGTTCTGGGAACCAGACTTTGGTCCTCAAAAGAG  300

seq1  CAGCCAGTGCTCTTAACTGCTGAGACATTTCTGCAGTCCAGCACATTAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGTGCTCTTAACTGCTGAGACATTTCTGCAGTCCAGCACATTAGT  350

seq1  TTTTGGGGGTGTTTGTTTGTTGTTTTTTAAGACAGGTCCTCTCAGTGGCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGGGTGTTTGTTTGTTGTTTTTTAAGACAGGTCCTCTCAGTGGCC  400

seq1  AAAGGCTGATGGGCCAGCAAGCTCCAGGGACCAGCCTGTCTCTGTCTCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGATGGGCCAGCAAGCTCCAGGGACCAGCCTGTCTCTGTCTCCT  450

seq1  CCCACAGAACCATTCCCTAATTTTTCATGTGGGTGCTGGGATTTGAACTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGAACCATTCCCTAATTTTTCATGTGGGTGCTGGGATTTGAACTC  500

seq1  AGGCCGTCCCACTTGCCCTGCAAGAGGTTTATCAGCTGCTCTGTCTCCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCGTCCCACTTGCCCTGCAAGAGGTTTATCAGCTGCTCTGTCTCCTC  550

seq1  AGTCCCAGAGCTGGGCGTGTTTCACCCCACAAGACTACAGCGATCAGCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAGAGCTGGGCGTGTTTCACCCCACAAGACTACAGCGATCAGCTC  600

seq1  AGAATGTAAGCTGAGGACAAATCTCTCCCTTGGGCATCTCACAGTGCAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTAAGCTGAGGACAAATCTCTCCCTTGGGCATCTCACAGTGCAAG  650

seq1  GCAGAAACCAAGGACAGGGAACTGAGAAACAGCAGACACACGGCTGGAAA  699
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GCAGAAACCAAGGACAGGGAACTGATAAACAGCAGACACACGGCTGGAAA  700

seq1  TGAGAGGGTCAGAAGAACCCA  720
      |||||||||||||||||||||
seq2  TGAGAGGGTCAGAAGAACCCA  721

seq1: chr8_123123055_123123791
seq2: B6Ng01-180D18.g_141_878 (reverse)

seq1  AGGTGGA-TCTCTGTGAATTTGAGTCTAGCCCGATCTACATAGAGAGTTG  49
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGATTCTCTGTGAATTTGAGTCTAGCCCGATCTACATAGAGAGTTG  50

seq1  CAGGGCAGCCAGGGCTACATAGAGAGACCCTGTATAGAAACAACAAAAAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCAGCCAGGGCTACATAGAGAGACCCTGTATAGAAACAACAAAAAT  100

seq1  AAAAATGTGGGTTTGCTTACATGTATGTTCTGGTGTTCTTAGAGTCTGTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTGGGTTTGCTTACATGTATGTTCTGGTGTTCTTAGAGTCTGTA  150

seq1  TGAGGGTATCAGATACCCTGGAACTCCCGTTACAGATGGTCGTGAGCTCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTATCAGATACCCTGGAACTCCCGTTACAGATGGTCGTGAGCTCT  200

seq1  CTGCAAGAAGGACTCTTAACCTCTGAGCACCCCTCCAGCCCCGGCGTTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGAAGGACTCTTAACCTCTGAGCACCCCTCCAGCCCCGGCGTTTT  250

seq1  GACGTTTGAGTCTCTCTTCCTTCCTCAGTCTCTCAGAGCGCTAAGATTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTTGAGTCTCTCTTCCTTCCTCAGTCTCTCAGAGCGCTAAGATTTC  300

seq1  AGGCCTGAACCCAGGCCCCAGATGCTGGGCTCACTTTGCTTTGTTTTGTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGAACCCAGGCCCCAGATGCTGGGCTCACTTTGCTTTGTTTTGTT  350

seq1  GGGTTTATAGGAGATAGTATCGCCTGGTAGCCCAGACTGGTCTTGAACCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTATAGGAGATAGTATCGCCTGGTAGCCCAGACTGGTCTTGAACCC  400

seq1  CCTCAGATACATAGTGAGAACCTGTCCCCTAAAGAGGTGTGGGGTAAGGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGATACATAGTGAGAACCTGTCCCCTAAAGAGGTGTGGGGTAAGGT  450

seq1  GGGGTGGGGCGGGGTGGGGACAGGAAAGCAGGTTCAGTAGTTATGAGCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGGCGGGGTGGGGACAGGAAAGCAGGTTCAGTAGTTATGAGCAT  500

seq1  TGGCTGCTCTTGCAGAGGACTCAAGTTCAGTCCCACAATGGTGGCGCACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCTCTTGCAGAGGACTCAAGTTCAGTCCCACAATGGTGGCGCACA  550

seq1  GCCAGCTGCAACTCCAGTCTCGGGGGATATGGTGCCCTCTTCTGGCCTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTGCAACTCCAGTCTCGGGGGATATGGTGCCCTCTTCTGGCCTCT  600

seq1  TCTGGAATTGCATGTGTACAGTGGACAAACATCGATAGGAATTAAATAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATTGCATGTGTACAGTGGACAAACATCGATAGGAATTAAATAGT  650

seq1  TGACAAAATTAAAGTTTAGAAACGAAAGGGGAAAAGACCAAAAAAAAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAATTAAAGTTTAGAAACGAAAGGGGAAAAGACCAAAAAAAAAAA  700

seq1  AAAAAAAAAAAGGAAAGGAAAATAGGGCGTGGTGGTTT  737
      ||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAGGAAAGGAAAATAGGGCGTGGTGGTTT  738