BAC Information

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BAC

Clone NameB6Ng01-180O13
Chromosome8 (Build37)
Map Location 61,492,091 - 61,493,204
singlet/doubletsinglet
Overlap genenone
Upstream gene4930431L04Rik, BC030500
Downstream geneLOC665116, LOC436042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180O13.bB6Ng01-180O13.g
ACCGA007219GA007220
length1,1171,163
definitionB6Ng01-180O13.b B6Ng01-180O13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gggaattctgacagcaaatcctattagagagcttatcctattccaggggc
actgcaacccatgcatggtgaaaagcacgagaaacgcaaatatgaaacaa
ttgtctgaggtgtctgaaatatcctcttgcaaggcaagtgaatgtggcag
aacattggggaaaacattttgtcaaacgcaatgcactggtgaacatcata
ttgcttcatagctatgttatttcaaaagtgtttactatcagtttcctgaa
attcattgtttctagattctattattagaaaagaaatggaaatgcttgtc
tataaaagatatagatattcatttctgcccactttcactgggtttctcta
tataagcatatagatagatagatgataggtagatagatatagatataaat
ttatatatgatataaattcatgtatattgatatatgtatgatataaattg
atatatcatacatatatcaatatatgatactaaggtttaaaatctgatat
tatggattcttgtaattacatgatatcctttgaaattaagatcgatccct
tcataatatttttacctataaaaataccttattctttcatttatttgttt
attagacaagaagaactttctgatcctcacatatcttcactctgtgttag
atctctttattttcatttacctagcttctcctaaatgtgcctaaaattga
taaaggtttttagttcttctatgactagataagtttatgttttacttatt
gaaagcaaggttggtctattttatgttgaaataagccatatcaaataaaa
tttttatattttgtgtatactttcacatccaaaattattaatttcacaga
atactagcttctttgaaaaataaattgaatttttcaaacaacatttttct
aatagtctataagttgtctgtatattgatcaaaatcattagattacttgc
taaattatttaattaaaatacatttacataatatcacttcaaaacttcaa
cccttttcttttattcaatgacctacaaattttggtccccttttaaaatt
gttcttttgtgtccacttatgtgaagggacatagtaatgaaacctgatat
tctgttccatgttcttt
gaattctcatctgaggaatactgaatggctgagaagcacctaagaaatgt
gcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagctt
ccacctcacaccagtcagaatggctaaaatccaaaatctctagtgacagc
agatgctggtgaggatgtggagaaaaatggaacactcctaaattgctggt
gggactgcaagttggtacagccactctggaaatcatatggcagttcctca
gaaaattgtacgttgtgctacctgaggacccagcaaataccacttctggg
catatacccagaagatgctccaacgtttaataaggacacatgctccacta
tgttcatagtaaccttatttatagtaaccagaagttggtaagaacccata
tgcccttcaacaaaggaatggatacagaaaatattgtacatttacacaat
ggagtactactctgctattaaaaacaatgaatttatgaaattcataggca
aatgtatggatctgcagtatatcatcctgagtgaggtaacccagtcacaa
aagagcacacatgatatgcactcactgataagtggatattattccagaag
cccagaagctcagaatacccaaattacacttcacagaccacatgaaactc
aagaagagggaagaccatattatggatacttctatccatcttagaagggg
gaaagaaaacacccatggaaggggttacagagaaaaagtgtggagtagag
actgaagaaatgactattaagagactcacctggggattccttccatttac
aattaccaaccccagacactgttgtggatgccaacaagatcttgcttgac
aggagcctgatatagctctctcttgagagaatctgcaactgtcctcataa
attcagttggtgtatgctcacagccatcaattggagtggagcattaggat
ctcccaatgaagggagttagagaaagggacctcaaggagctgaaggggtt
tgcagctctcataaggaggaacaatcaataatggaacctaagcagtcccc
cccccctagagcctcctaggggactaaaccacccaaccaagagcacaatt
tttttgagaactcattgccttccaggcttttatattggaaaggcaaagga
aatgggctctaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61492091_61493204
seq2: B6Ng01-180O13.b_47_1161

seq1  GAATTCTGACAGCAAATCCTATTAGAGAGCTTAT-TTATTCCAGGGGCAC  49
      ||||||||||||||||||||||||||||||||||  ||||||||||||||
seq2  GAATTCTGACAGCAAATCCTATTAGAGAGCTTATCCTATTCCAGGGGCAC  50

seq1  TGCAACCCATGCATGGTGAAAAGCACGAGAAACGCAAATATGAAACAATT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACCCATGCATGGTGAAAAGCACGAGAAACGCAAATATGAAACAATT  100

seq1  GTCTGAGGTGTCTGAAATATCCTCTTGCAAGGCAAGTGAATGTGGCAGAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAGGTGTCTGAAATATCCTCTTGCAAGGCAAGTGAATGTGGCAGAA  150

seq1  CATTGGGGAAAACATTTTGTCAAACGCAATGCACTGGTGAACATCATATT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGGGAAAACATTTTGTCAAACGCAATGCACTGGTGAACATCATATT  200

seq1  GCTTCATAGCTATGTTATTTCAAAAGTGTTTACTATCAGTTTCCTGAAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATAGCTATGTTATTTCAAAAGTGTTTACTATCAGTTTCCTGAAAT  250

seq1  TCATTGTTTCTAGATTCTATTATTAGAAAAGAAATGGAAATGCTTGTCTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTTCTAGATTCTATTATTAGAAAAGAAATGGAAATGCTTGTCTA  300

seq1  TAAAAGATATAGATATTCATTTCTGCCCACTTTCACTGGGTTTCTCTATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATATAGATATTCATTTCTGCCCACTTTCACTGGGTTTCTCTATA  350

seq1  TAAGCATATAGATAGATAGATGATAGGTAGATAGATATAGATATAAATTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATATAGATAGATAGATGATAGGTAGATAGATATAGATATAAATTT  400

seq1  ATATATGATATAAATTCATGTATATTGATATATGTATGATATAAATTGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGATATAAATTCATGTATATTGATATATGTATGATATAAATTGAT  450

seq1  ATATCATACATATATCAATATATGATACTAAGGTTTAAAATCTGATATTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATACATATATCAATATATGATACTAAGGTTTAAAATCTGATATTA  500

seq1  TGGATTCTTGTAATTACATGATATCCTTTGAAATTAAGATCGATCCCTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCTTGTAATTACATGATATCCTTTGAAATTAAGATCGATCCCTTC  550

seq1  ATAATATTTTTACCTATAAAAATACCTTATTCTTTCATTTATTTGTTTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTTTTACCTATAAAAATACCTTATTCTTTCATTTATTTGTTTAT  600

seq1  TAGACAAGAAGAACTTTCTGATCCTCACATATCTTCACTCTGTGTTAGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAAGAAGAACTTTCTGATCCTCACATATCTTCACTCTGTGTTAGAT  650

seq1  CTCTTTATTTTCATTTACCTAGCTTCTCCTAAATGTGCCTAAAATTGATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATTTTCATTTACCTAGCTTCTCCTAAATGTGCCTAAAATTGATA  700

seq1  AAGGTTTTTAGTTCTTCTATGACTAGATAAGTTTATGTTTTACTTATTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTTTAGTTCTTCTATGACTAGATAAGTTTATGTTTTACTTATTGA  750

seq1  AAGCAAGGTTGGTCTATTTTATGTTGAAATAAGCCATATCAAATAAAA-T  798
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAGCAAGGTTGGTCTATTTTATGTTGAAATAAGCCATATCAAATAAAATT  800

seq1  TTTATATTTTGTGTATACTTTCACATCCAAAATTATTAATTTCACAGAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATTTTGTGTATACTTTCACATCCAAAATTATTAATTTCACAGAAT  850

seq1  ACTAGCTTCTTTGAAAAATAAATTGAATTTTTCAAACAACATTTTTCTAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCTTCTTTGAAAAATAAATTGAATTTTTCAAACAACATTTTTCTAA  900

seq1  TAGTCTATAAGTTGTCTGTATATTGATCAAAATCATTAGATTACTTGCTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTATAAGTTGTCTGTATATTGATCAAAATCATTAGATTACTTGCTA  950

seq1  AATTATTTAATTAAAATACAATTACATAATATCACCTCAAAACTTCAACC  998
      |||||||||||||||||||| |||||||||||||| ||||||||||||||
seq2  AATTATTTAATTAAAATACATTTACATAATATCACTTCAAAACTTCAACC  1000

seq1  CTTTTCTTTTATTCAATGACCTACAAATTTTTGTCCCCTTTTAAAATTGT  1048
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTTTTCTTTTATTCAATGACCTACAAATTTTGGTCCCCTTTTAAAATTGT  1050

seq1  TCTTTTTGTGTCCACTTATGTGAAAGGACATAGTAATGAAACCTGATAAT  1098
      || ||||||||||||||||||||| |||||||||||||||||||||| ||
seq2  TC-TTTTGTGTCCACTTATGTGAAGGGACATAGTAATGAAACCTGAT-AT  1098

seq1  TCTGTTCCATG-TCTTT  1114
      ||||||||||| |||||
seq2  TCTGTTCCATGTTCTTT  1115