BAC Information

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BAC

Clone NameB6Ng01-181P18
Chromosome8 (Build37)
Map Location 115,522,972 - 115,648,713
singlet/doubletdoublet
Overlap genenone
Upstream geneKars, Terf2ip, EG627828, LOC672498, LOC100042040, Cntnap4, LOC100042061
Downstream geneMon1b, 4930481F22Rik, Adamts18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181P18.bB6Ng01-181P18.g
ACCGA008000GA008001
length1,112489
definitionB6Ng01-181P18.b B6Ng01-181P18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,647,590 - 115,648,713)(115,522,972 - 115,523,466)
sequence
gaattcaggactaccagctcagggatggcaccacccaccataggctggat
cctttccccttgatgactagttgagaaaatgccctactgctggatctcat
ggaggcatttactcaactgaggctcctttctctgtgatgcctctcatctg
tgtcaagttgacacacaaaatcaggcagtacagatggtattagcctaagt
gtgctgggccttcctttgtcaattaactgtcaagaaaacaccccgatgga
catgtctacagtccaatcttaatggaggcaatttttaaataaggttcctt
cttcccaggtgtgccaaccacaacacattcaaatgcacagcaaaggcaaa
caaccctgttcacaatgctctcagtaggaacagatgtaggatcaacctct
tcaggtgtttaccttctggaatgggtatcttaaagaaggtaggttgatta
tgctatgcctcatgttgaagctagaagtgtgctagatatatttttaggct
tcctctaaactttcaccccaatttgtgttctggactggaatcagaagggt
gtacccctcaatagtaaatggtgacagcaaatagtaaaagaaaaaaacca
agcagttactaaccatcctactcacagtctagatataacactaaaccata
aataagatagggctggagagaaagctcagtcagtaaactgtttgcccaag
ctgaaagacctgaattcaattcccagtcccatgttttaaaaaaggcaggt
ttgttacacgtattagaaaatcccagtgctaggtacagagagatctctag
gggtggctgatcagccagttttaacttcacaaccagttccaggtcagtga
gacacactatcaaaaacctaaaggtggacaccacctatgggaagacacct
gagcttgtcttctggctttcaagggaataggtatatacatgcatatgaac
actttacatataaacacacatgcacacatttaatcagatctttctaaagt
tctttggaagttctaagtcttatgtcttcacttattcctttgggggagta
tgagagggcagtattctgtaccaattcatgactagtatttggataaatta
ggatatgatcgc
aggcccacgcctcaacatgagtttgggtggaaacaaaccagattcaaatc
acagtaagagatattgtatctatgtttgaaattcacaaaaataaaccaca
cacacacactagatatagatatagatatagatatagatatagatatagat
atagatatagatatagatatagatattgtgatgtggcttctaggccagca
ctctttggtgtttgtgaaactgtgtatcttcactctggaagaggcctgat
ttggatttttttccctcccactctggggtcatacaccacccttgccattt
ttgacaatactgtatgcacacctttttttttttttagctcatctatagac
gcctatacctaaaagatgtgagggcacatcgattatgttcatacaataga
ggctaaaagttgatacactttgaccattttaaaaactgaagaatcttaaa
gacaagtggctttctaagatgaagtgtctggtaactgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_115647590_115648713
seq2: B6Ng01-181P18.b_47_1158 (reverse)

seq1  GCGATCATTTATCTTTATTTTATCCCCAAATTACTAGTCATTGATTTTGT  50
      |||||||  ||||  || |||||||   || ||||||||| ||| || ||
seq2  GCGATCA--TATC-CTAATTTATCC---AAATACTAGTCA-TGAATTGGT  43

seq1  ACAGTATACTTCCCTCTCATAACTTCCCCCAAGGGAATAAGTGGAAGACC  100
      |||| ||||| ||||||||||   |||||||| ||||||||| ||||| |
seq2  ACAGAATACTGCCCTCTCATA--CTCCCCCAAAGGAATAAGT-GAAGA-C  89

seq1  ATAGGACCTTAGAACTTCCAAAGAACTTTAGAAAGATTCTGATTTAATTG  150
      ||| || ||||||||||||||||||||||||||||| ||||| |||| ||
seq2  ATAAGA-CTTAGAACTTCCAAAGAACTTTAGAAAGA-TCTGA-TTAAATG  136

seq1  TGTGCATGTGTGTTTATATGT-AAGTGTTCATATGCATGTATATACCTAT  199
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGTGCATGTGTGTTTATATGTAAAGTGTTCATATGCATGTATATACCTAT  186

seq1  T-CCTTGAAAGCCAGAAGACAAGCTCAGGTGTCTTCCCATAGGTGGTGTC  248
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGAAAGCCAGAAGACAAGCTCAGGTGTCTTCCCATAGGTGGTGTC  236

seq1  CACCTTTAGGTTTTTGATAGTGTGTCTCACTGACCTGGAACTGGTTGTGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTAGGTTTTTGATAGTGTGTCTCACTGACCTGGAACTGGTTGTGA  286

seq1  AGTTAAAACTGGCTGATCAGCCACCCCTAGAGATCTCTCTGTACCTAGCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAACTGGCTGATCAGCCACCCCTAGAGATCTCTCTGTACCTAGCA  336

seq1  CTGGGATTTTCTAATACGTGTAACAAACCTGCCTTTTTTAAAACATGGGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTTTCTAATACGTGTAACAAACCTGCCTTTTTTAAAACATGGGA  386

seq1  CTGGGAATTGAATTCAGGTCTTTCAGCTTGGGCAAACAGTTTACTGACTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAATTGAATTCAGGTCTTTCAGCTTGGGCAAACAGTTTACTGACTG  436

seq1  AGCTTTCTCTCCAGCCCTATCTTATTTATGGTTTAGTGTTATATCTAGAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCTCTCCAGCCCTATCTTATTTATGGTTTAGTGTTATATCTAGAC  486

seq1  TGTGAGTAGGATGGTTAGTAACTGCTTGGTTTTTTTCTTTTACTATTTGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTAGGATGGTTAGTAACTGCTTGGTTTTTTTCTTTTACTATTTGC  536

seq1  TGTCACCATTTACTATTGAGGGGTACACCCTTCTGATTCCAGTCCAGAAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCATTTACTATTGAGGGGTACACCCTTCTGATTCCAGTCCAGAAC  586

seq1  ACAAATTGGGGTGAAAGTTTAGAGGAAGCCTAAAAATATATCTAGCACAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTGGGGTGAAAGTTTAGAGGAAGCCTAAAAATATATCTAGCACAC  636

seq1  TTCTAGCTTCAACATGAGGCATAGCATAATCAACCTACCTTCTTTAAGAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGCTTCAACATGAGGCATAGCATAATCAACCTACCTTCTTTAAGAT  686

seq1  ACCCATTCCAGAAGGTAAACACCTGAAGAGGTTGATCCTACATCTGTTCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTCCAGAAGGTAAACACCTGAAGAGGTTGATCCTACATCTGTTCC  736

seq1  TACTGAGAGCATTGTGAACAGGGTTGTTTGCCTTTGCTGTGCATTTGAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGAGCATTGTGAACAGGGTTGTTTGCCTTTGCTGTGCATTTGAAT  786

seq1  GTGTTGTGGTTGGCACACCTGGGAAGAAGGAACCTTATTTAAAAATTGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTGGTTGGCACACCTGGGAAGAAGGAACCTTATTTAAAAATTGCC  836

seq1  TCCATTAAGATTGGACTGTAGACATGTCCATCGGGGTGTTTTCTTGACAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTAAGATTGGACTGTAGACATGTCCATCGGGGTGTTTTCTTGACAG  886

seq1  TTAATTGACAAAGGAAGGCCCAGCACACTTAGGCTAATACCATCTGTACT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGACAAAGGAAGGCCCAGCACACTTAGGCTAATACCATCTGTACT  936

seq1  GCCTGATTTTGTGTGTCAACTTGACACAGATGAGAGGCATCACAGAGAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGATTTTGTGTGTCAACTTGACACAGATGAGAGGCATCACAGAGAAA  986

seq1  GGAGCCTCAGTTGAGTAAATGCCTCCATGAGATCCAGCAGTAGGGCATTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTCAGTTGAGTAAATGCCTCCATGAGATCCAGCAGTAGGGCATTT  1036

seq1  TCTCAACTAGTCATCAAGGGGAAAGGATCCAGCCTATGGTGGGTGGTGCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACTAGTCATCAAGGGGAAAGGATCCAGCCTATGGTGGGTGGTGCC  1086

seq1  ATCCCTGAGCTGGTAGTCCTGAATTC  1124
      ||||||||||||||||||||||||||
seq2  ATCCCTGAGCTGGTAGTCCTGAATTC  1112

seq1: chr8_115522972_115523466
seq2: B6Ng01-181P18.g_65_559

seq1  GAATTCAGGCCCACGCCTCAACATGAGTTTGGGTGGAAACAAACCAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCCCACGCCTCAACATGAGTTTGGGTGGAAACAAACCAGATT  50

seq1  CAAATCACAGTAAGAGATATTGTATCTATGTTTGAAATTCACAAAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCACAGTAAGAGATATTGTATCTATGTTTGAAATTCACAAAAATAA  100

seq1  ACCACACACACACACTAGATATAGATATAGATATAGATATAGATATAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACACACACACTAGATATAGATATAGATATAGATATAGATATAGAT  150

seq1  ATAGATATAGATATAGATATAGATATAGATATTGTGATGTGGCTTCTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATATAGATATAGATATAGATATAGATATTGTGATGTGGCTTCTAGG  200

seq1  CCAGCACTCTTTGGTGTTTGTGAAACTGTGTATCTTCACTCTGGAAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACTCTTTGGTGTTTGTGAAACTGTGTATCTTCACTCTGGAAGAGG  250

seq1  CCTGATTTGGATTTTTTTCCCTCCCACTCTGGGGTCATACACCACCCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTTGGATTTTTTTCCCTCCCACTCTGGGGTCATACACCACCCTTG  300

seq1  CCATTTTTGACAATACTGTATGCACACCTTTTTTTTTTTTTAGCTCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTGACAATACTGTATGCACACCTTTTTTTTTTTTTAGCTCATCT  350

seq1  ATAGACGCCAATACCTAAAAGATGTGAGGGCACATCGATTATGTTCATAC  400
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACGCCTATACCTAAAAGATGTGAGGGCACATCGATTATGTTCATAC  400

seq1  AATAGAGGCTCAAAGTTGATACACTTTGACCATTTTAAAAACTGAAGAAT  450
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGGCTAAAAGTTGATACACTTTGACCATTTTAAAAACTGAAGAAT  450

seq1  CTTAAAGACAAGTGGCTTTCTAAGATGAAGTGTCTGGGAACTGGA  495
      ||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTTAAAGACAAGTGGCTTTCTAAGATGAAGTGTCTGGTAACTGGA  495