BAC Information

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BAC

Clone NameB6Ng01-182D18
Chromosome8 (Build37)
Map Location 59,020,654 - 59,021,826
singlet/doubletsinglet
Overlap geneBC088983
Upstream geneLOC100040356, LOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948
Downstream geneFbxo8, LOC100040431, EG624433, LOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182D18.bB6Ng01-182D18.g
ACCGA008184GA008185
length1,173906
definitionB6Ng01-182D18.b B6Ng01-182D18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcatgccaaaggaagaagaatgtttctgagaagccagaacctt
gttcaaacagtgagaaacgccctgcagaggctgttggcattgacatcacg
ggcaggtttatgacgtcgggaaaggtgtgaaaagaaaagggacagtagcg
tctttgtacagagagatggagttctccactgcagcaggcagcacggacac
aaggcgtttttagtagtgaaaacgagttttcttaaaggccttttttcatg
tatttatgtgttttgatcaaattttctcgggtgctctctctctcttaccc
cacttccctttcctccccgcagtctcagcaggggacttcttagtgatgtt
tggggacaattcctaaacttgtgagaagtgtaaacaggaaaacttgtata
ggtttcatatttctaatgttgaattctttttcatttttcagataaaatgt
agtaaggttattttatagaggcattgacatgcttttaaaagtatacttat
tttatcttacatggttgtttatcagaaggaagcaaaaaagtgtcagatcc
cgtagagtcctgtgtggttgtaagtgtccatgtgaatgctagcaaccaaa
cctgtgtcttgcaagagtttgtaagtgttttttaacctgagatgtctttg
cagccctcagtgtatactcttaattacatatctgatcatccctaaaaagg
tgtgtgtatgtattaagtggtccactagtagcaagagtgattttgaaagg
ttcttttagatgcagtgaaaaccaagattatagattctctagtaatctgg
ttttgagtattctttattctaggtattcgttgtctctgtctttgtctgtt
ttgagcacctgcggctaaatgagttccaacacttgagagacagcagcttt
ttcttatccaaggggagctctgagctaatatcccattttaatataaatgt
ccttctagctgttttccttttggggtgaggaggcagaatacagatcatat
tcgattgtagagttaggataaaggtataagtcttttctcaattaagtgaa
atacatagaggttactatctttattccaaatatattgactagaaagcttt
atacaggaaggtgagttacttactgaaaagcgtgtggtattccattaatc
atttcttacggtcttgttgacaa
gaattcctctttaaccatataatccggctatattacacttcagcatatat
gaaatgggtagagatgaattggagtgggaaagagcagagaagaagaagaa
ggagagtagacagtatcaataccataaagacttctcaaaaaagtcatttg
gacatacattaaagtagcatttcctaaactatatctgtatatatgcgtta
ggagactaaaaatggaattatcctgtaacaggacaacaatgcctctcctt
gccaccagaggctaacaaatagcacagtcccaaggaagggttgcttcttt
aggagttttggttaatgaagactcaaatgtgctgttagctacgcttcagg
acttgatgattagaccccattgctaaagctatcactcacttgaatcatag
aagaatgataaatcaagttaataatgatttgggaactttatccttactgg
ctagcttcatagtgctgaaaggtaccatgcaacctacttggggagaaaca
cagtcatcaagcatacccagctattagtcctgtgagctacaataataaag
ggcctggcaagacatgcccatagaaccaatagtggcaggaatggaaccaa
tcattttctaatagaaagtattagaatagaaaagattctaatagacctgc
tccaaaagacaaaactcacacatgcctctaatatgtgggcaagaacctct
ggctaaaccactcctaaactctaggagggaaactactacgattattctgc
taaatggacagagtactaaaccaacatctaatgttctatgatacccatag
attgaggcatctcaaaacctcaaacagagaagcttctgtttgcaatagat
aatgatcaacacagaaacccacaactgggcaattattggggggtgggggg
ggatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59020654_59021826
seq2: B6Ng01-182D18.b_44_1216 (reverse)

seq1  TTGTCAACCAAGAAACGTAAG-AATGATTA--TGAATACCACCAGCTTTT  47
      ||||||| |||| | |||||| ||||||||   |||||||||  ||||||
seq2  TTGTCAA-CAAG-ACCGTAAGAAATGATTAATGGAATACCACACGCTTTT  48

seq1  CAGT-AGTTACTCACCTTTCTGGTATTAAAGCTTTTCTAGTC-ATATATT  95
      |||| ||| ||||||||| || ||| |||||| ||||||||| |||||||
seq2  CAGTAAGTAACTCACCTTCCT-GTA-TAAAGC-TTTCTAGTCAATATATT  95

seq1  TTGAATTAAAGAATAAGTAA-CTCTATGTATTTCACTTTATTGAGAAAAA  144
      | ||| ||||||   ||||| ||||||||||||||||| |||||||||| 
seq2  TGGAA-TAAAGA--TAGTAACCTCTATGTATTTCACTTAATTGAGAAAAG  142

seq1  ATTTATACCTTTTATCTAACTCTAC-ATCGATTATTGATCTGTATTCTGC  193
      | ||||||||||   |||||||||| ||||| || |||||||||||||||
seq2  ACTTATACCTTTATCCTAACTCTACAATCGAATA-TGATCTGTATTCTGC  191

seq1  CTCCTCACCCCAAAAGGAAAACAGCTAGAAGGACATTTATTATTAAAATG  243
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTCCTCACCCCAAAAGGAAAACAGCTAGAAGGACATTTA-TATTAAAATG  240

seq1  GGATATTAGCTCAGAGCTCCCCTTGGATAAG-AAAAGCTGCTGTCTCTCA  292
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGATATTAGCTCAGAGCTCCCCTTGGATAAGAAAAAGCTGCTGTCTCTCA  290

seq1  AGTGTTGGAACTCATTTAGCCGCAGGTGCTC-AAACAGACAAAGACAGAG  341
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGTGTTGGAACTCATTTAGCCGCAGGTGCTCAAAACAGACAAAGACAGAG  340

seq1  ACAACGAATACCTAGAATAAAGAATACTCAAAACCAGATTACTAGAGAAT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACGAATACCTAGAATAAAGAATACTCAAAACCAGATTACTAGAGAAT  390

seq1  CTATAATCTTGGTTTTCACTGCATCTAAAAGAACC-TTCAAAATCACTCT  440
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTATAATCTTGGTTTTCACTGCATCTAAAAGAACCTTTCAAAATCACTCT  440

seq1  TGCTACTAGTGGACCACTTAATACATACACACACCTTTTTAGGGATGATC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTAGTGGACCACTTAATACATACACACACCTTTTTAGGGATGATC  490

seq1  AGATATGTAATTAAGAGTATACACTGAGGGCTGCAAAGACATCTCAGGTT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGTAATTAAGAGTATACACTGAGGGCTGCAAAGACATCTCAGGTT  540

seq1  AAAAAACACTTACAAACTCTTGCAAGACACAGGTTTGGTTGCTAGCATTC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACACTTACAAACTCTTGCAAGACACAGGTTTGGTTGCTAGCATTC  590

seq1  ACATGGACACTTACAACCACACAGGACTCTACGGGATCTGACACTTTTTT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGACACTTACAACCACACAGGACTCTACGGGATCTGACACTTTTTT  640

seq1  GCTTCCTTCTGATAAACAACCATGTAAGATAAAATAAGTATACTTTTAAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTTCTGATAAACAACCATGTAAGATAAAATAAGTATACTTTTAAA  690

seq1  AGCATGTCAATGCCTCTATAAAATAACCTTACTACATTTTATCTGAAAAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTCAATGCCTCTATAAAATAACCTTACTACATTTTATCTGAAAAA  740

seq1  TGAAAAAGAATTCAACATTAGAAATATGAAACCTATACAAGTTTTCCTGT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAGAATTCAACATTAGAAATATGAAACCTATACAAGTTTTCCTGT  790

seq1  TTACACTTCTCACAAGTTTAGGAATTGTCCCCAAACATCACTAAGAAGTC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTTCTCACAAGTTTAGGAATTGTCCCCAAACATCACTAAGAAGTC  840

seq1  CCCTGCTGAGACTGCGGGGAGGAAAGGGAAGTGGGGTAAGAGAGAGAGAG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTGAGACTGCGGGGAGGAAAGGGAAGTGGGGTAAGAGAGAGAGAG  890

seq1  CACCCGAGAAAATTTGATCAAAACACATAAATACATGAAAAAAGGCCTTT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCGAGAAAATTTGATCAAAACACATAAATACATGAAAAAAGGCCTTT  940

seq1  AAGAAAACTCGTTTTCACTACTAAAAACGCCTTGTGTCCGTGCTGCCTGC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACTCGTTTTCACTACTAAAAACGCCTTGTGTCCGTGCTGCCTGC  990

seq1  TGCAGTGGAGAACTCCATCTCTCTGTACAAAGACGCTACTGTCCCTTTTC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGGAGAACTCCATCTCTCTGTACAAAGACGCTACTGTCCCTTTTC  1040

seq1  TTTTCACACCTTTCCCGACGTCATAAACCTGCCCGTGATGTCAATGCCAA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACACCTTTCCCGACGTCATAAACCTGCCCGTGATGTCAATGCCAA  1090

seq1  CAGCCTCTGCAGGGCGTTTCTCACTGTTTGAACAAGGTTCTGGCTTCTCA  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCTGCAGGGCGTTTCTCACTGTTTGAACAAGGTTCTGGCTTCTCA  1140

seq1  GAAACATTCTTCTTCCTTTGGCATGATGAATTC  1173
      |||||||||||||||||||||||||||||||||
seq2  GAAACATTCTTCTTCCTTTGGCATGATGAATTC  1173