BAC Information

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BAC

Clone NameB6Ng01-183I03
Chromosome8 (Build37)
Map Location 39,675,517 - 39,676,606
singlet/doubletsinglet
Overlap genenone
Upstream geneSgcz
Downstream geneTusc3, LOC100038974, LOC632066, EG621335, LOC434304
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183I03.bB6Ng01-183I03.g
ACCGA009112GA009113
length887786
definitionB6Ng01-183I03.b B6Ng01-183I03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcctgagagacaggaagggtttgtccctagttactgcagacct
ttttggttgtagggtgtgagatggtattagctgctgatctgggcccagta
gagaagcagaccagaagaaagatggagcttagcagtgctgtaggttccac
agaaactatgtgtgtatcccatctggcatgggtatttgagcgacaagtat
ggaatgtggtagggtatcgcgtcatcctcttcacttgtaatagtagtgtt
aactgggtctataacaaatcagcttaaaaaattaattatctggagtgtga
gagatggcttaagagttaagaatagctgttgtttttctagtggacatagg
tttgattctctgtaaccatatggtgactcacaacattatgcacctcctgt
aaaagagaatctgacatcctgttctggtacccacagagacaaggaattca
tatggtataagacacacatgttgccaggcgctggtggcacacacctttaa
tcccagcactggggaggtagaggcaggcatatttctgagttcaaagctag
cctggtctacagagtgagttccaggacagccagggctatacagagaaatc
ctgtctcaaaagaaaaaccaaaaaaaaaaaaaaaaaaaaaccttaaaata
aataaataaataaataagacacacatgtgggcaacccccatatagagtta
agataaaatcataataattaaaaaataaagaataaattctttatcctttg
tggctggcagcattatgcatctcatcttgtcctcaataagaggacattag
ctgatacaaaaagatatgtctaggatgaatatatgctgccttttttttct
gattccttctttttattagtatatccattttaaacta

gaattccagtggagggattgggatggcagtccagccataaaacctttgac
ctacaatttatcttgcctagaagatatgaaggaataaagacacagcaaaa
attaaagaaatggtcaaataatatctagtctagcttgaggcccatgccat
gagaaggcacccatccctgacactgtcaatgttattgttctacatttgca
gtaaggagcctagcaaccattatcagagaggcttcatccagcaactgatg
gaaagatacaaagacccacatctaaatattatgcagatattgtagaatcc
tgaggaagagggggagaaaggattgtgagagccagatgggtcacagacac
cacaaaaaaatcctacacagtcaactaacctgggccaatagagatcacag
aatgacctgcaacaaggaagctaatatgagattgaccaaggctctgtgca
catagggaacagatgtacagtttgggattcatttggactccaaagagtgg
gagcaggggctgtaaacgactctgttgcctacctttggaactctttaccc
ctaccagaatgcctcctttagcctaatagaagatattctcagtctagtct
agtctgcaacttgataagccatgactgatatccatgaatagcattgcttg
tctgaagtgaaagggaagaaagaggaaatgaggaggggagtagtggatgg
ggaaggactgggaggaaacgagagagggaaaaccgtactttgggatgtaa
agtaaaatttattgattttaatacgtttgattatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_39675517_39676606
seq2: B6Ng01-183I03.b_44_1121 (reverse)

seq1  TATCATTTTCTTTTCTAACATCTCTTTTCTATAGAAGATCCCAAAATATT  50
      |||||||| |||||||||||||||||||||| |||||||||| ||||| |
seq2  TATCATTTCCTTTTCTAACATCTCTTTTCTAAAGAAGATCCC-AAATA-T  48

seq1  GACTTAACTAACAAGAAAGGTAAGATTCTTTCCTACATTATAGTCTCCAT  100
      ||||||||| |||||||||   ||| ||||||||||||||||||||||||
seq2  GACTTAACT-ACAAGAAAG--TAGA-TCTTTCCTACATTATAGTCTCCAT  94

seq1  GTAAAGAGTTTAGTTGGGATAAGATATTTTTGTATTTTGTTGTTTTAATT  150
      |||||||| |||| |||||| ||||| ||||||||||   ||||| ||||
seq2  GTAAAGAG-TTAG-TGGGAT-AGATA-TTTTGTATTT--GTGTTTAAATT  138

seq1  TTTGTTTGTTTTTTTTCCAGCTTCAAAAAAGCCTTTA-AAAAAGCCTTAC  199
      ||   ||||||||||||||||||||||||||||||||             
seq2  TT--GTTGTTTTTTTTCCAGCTTCAAAAAAGCCTTTANNNNNNNNNNNNN  186

seq1  AGATATAGTTTAAAATGGATATACTAATAAAAAGAAGGAATCAG-AAAAA  248
           ||||||||||||||||||||||||||||||||||||||| |||||
seq2  NNNNNTAGTTTAAAATGGATATACTAATAAAAAGAAGGAATCAGAAAAAA  236

seq1  AAGGCAGCATATATTCATCCTAGACATATCTTTTTGTATCAGCTAATGTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGCATATATTCATCCTAGACATATCTTTTTGTATCAGCTAATGTC  286

seq1  CTCTTATTGAGGACAAGATGAGATGCATAATGCTGCCAGCCACAAAGGAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATTGAGGACAAGATGAGATGCATAATGCTGCCAGCCACAAAGGAT  336

seq1  AAAGAATTTATTCTTTATTTTTTAATTATTATGATTTTATCTTAACTCTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATTTATTCTTTATTTTTTAATTATTATGATTTTATCTTAACTCTA  386

seq1  TATGGGGGTTGCCCACATGTGTGTCTTATTTATTTATTTATTTATTTTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGGGTTGCCCACATGTGTGTCTTATTTATTTATTTATTTATTTTAA  436

seq1  GGTTTTTTTTTTTTTTTTTTTTTGGTTTTTCTTTTGAGACAGGATTTCTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTTTTTTTTTTTTTTTGGTTTTTCTTTTGAGACAGGATTTCTC  486

seq1  TGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTAGCTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTAGCTTT  536

seq1  GAACTCAGAAATATGCCTGCCTCTACCTCCCCAGTGCTGGGATTAAAGGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGAAATATGCCTGCCTCTACCTCCCCAGTGCTGGGATTAAAGGT  586

seq1  GTGTGCCACCAGCGCCTGGCAACATGTGTGTCTTATACCATATGAATTCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCACCAGCGCCTGGCAACATGTGTGTCTTATACCATATGAATTCC  636

seq1  TTGTCTCTGTGGGTACCAGAACAGGATGTCAGATTCTCTTTTACAGGAGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTGTGGGTACCAGAACAGGATGTCAGATTCTCTTTTACAGGAGG  686

seq1  TGCATAATGTTGTGAGTCACCATATGGTTACAGAGAATCAAACCTATGTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAATGTTGTGAGTCACCATATGGTTACAGAGAATCAAACCTATGTC  736

seq1  CACTAGAAAAACAACAGCTATTCTTAACTCTTAAGCCATCTCTCACACTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGAAAAACAACAGCTATTCTTAACTCTTAAGCCATCTCTCACACTC  786

seq1  CAGATAATTAATTTTTTAAGCTGATTTGTTATAGACCCAGTTAACACTAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAATTAATTTTTTAAGCTGATTTGTTATAGACCCAGTTAACACTAC  836

seq1  TATTACAAGTGAAGAGGATGACGCGATACCCTACCACATTCCATACTTGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAAGTGAAGAGGATGACGCGATACCCTACCACATTCCATACTTGT  886

seq1  CGCTCAAATACCCATGCCAGATGGGATACACACATAGTTTCTGTGGAACC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCAAATACCCATGCCAGATGGGATACACACATAGTTTCTGTGGAACC  936

seq1  TACAGCACTGCTAAGCTCCATCTTTCTTCTGGTCTGCTTCTCTACTGGGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCACTGCTAAGCTCCATCTTTCTTCTGGTCTGCTTCTCTACTGGGC  986

seq1  CCAGATCAGCAGCTAATACCATCTCACACCCTACAACCAAAAAGGTCTGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCAGCAGCTAATACCATCTCACACCCTACAACCAAAAAGGTCTGC  1036

seq1  AGTAACTAGGGACAAACCCTTCCTGTCTCTCAGGAGGAATTC  1090
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTAGGGACAAACCCTTCCTGTCTCTCAGGAGGAATTC  1078


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