BAC Information

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BAC

Clone NameB6Ng01-185F14
Chromosome8 (Build37)
Map Location 126,726,660 - 126,874,165
singlet/doubletdoublet
Overlap geneGalnt2
Upstream geneChmp1a, 4732415M23Rik, Cdk10, Spata2L, 1300018I17Rik, Zfp276, Fanca, Spire2, Tcf25, Mc1r, Tubb3, Def8, Afg3l1, Dbndd1, Gas8, Rn5s-ps1, Rhou, LOC100042484, LOC100042490, Rab4a, 1700054N08Rik, LOC100043296, Acta1, Nup133, Abcb10, Taf5l, AK122209, LOC100042530, LOC100042535
Downstream genePgbd5, Cog2, Agt, Capn9, 2310022B05Rik, Ttc13, Arv1, 2310031A18Rik, LOC668444, Trim67, 2810004N23Rik, Gnpat, Exoc8, Gm505, Egln1, Tsnax, Disc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185F14.bB6Ng01-185F14.g
ACCGA010487GA010488
length1,164696
definitionB6Ng01-185F14.b B6Ng01-185F14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,726,660 - 126,727,799)(126,873,471 - 126,874,165)
sequence
gaattcagactgattctcctcttcactcctggacgcctccacggcagcct
gggagcccaagctcccctctgattgaccaggctgactttaagactagaaa
ctcatctacccaccatgctccagccgccccaaccctctgtgcttcatcct
ttctctccatcccagaaatcatcccacagtgtaggaaaccttttagctgc
tcatgggtacctttcataaggcagacattcagggcctgcatcactccaca
ctggcatgtaagacgtgccagcgcaccttgaatgataacaaatatttgtt
caatgactgcacagcaagaacgctgcccaagctctatgtttgctttcccc
ggggaagattgctatctcttcacgcctctgctcaccaatgccccttccaa
ctctcctttcctccagtatttctctgctggtcatgattgtgattgtggtt
gttgctgttgctgttgttagtggtggctttgttttgtttgcatcaaactt
gctgtagtctggtatcatctgagaagagggacccacaaataagaaaatgc
ccccatcagattgtctgtgggcaggtctgtgggacattttcttgattgat
taatgtggaaaggcccagcccactgtagggtgagccacccctgggcaggt
ggttctgggttgtgtaagaaagcaggctgagcaagccaggagaagcaagc
cagtaagcagcacccttcatggccgctgcctgctgcctccactgcttctc
ttcctgcctccaggctccctgacctgagcttctgcctggatttccctcca
tggtgaactataaaccttaagctgaaacacacctagattgattttagtca
tcgtctttaccccagcatcaggaagcaaagcccccacccccttccccgct
aaccccctgaagttcaattcctgactccttggaattcattttttccaagt
gaaggcccttagcagaaaatttgttttttgcctttatgtgtcctgagaaa
aaccaaaaacaaaacaaaactaaactaaaaaaagtcctttttccttctga
tttttgtttattgaaacagggttctttactttcatagcccaagaaatact
tggcctcaaacccagttattctcttgcttggatactcccacgttgcctgg
gaattgtcttacca
gaattcctttatgatcccatgcagccaagcacaatatctgaagatcttga
gaaggagtcactgaggcctctaaggacattagagtatagggtacctaaga
atccaaggctattgccctggaatgggtggactgaactgggcctgggagag
gggcaggtttaggtgctgtgtctaacctcaaaagtgtcagggtaacaaca
cagcaacagatctgacagcctgatcttacctggatcccatgatcttctaa
acctaggtttttttgcctttctttcctgggaaatgtccctacctctgggt
gaggctgttcccggtctggccagcagagggcagcagaacctcaaattagc
acaaaacagaccaaatagtgttgtggactggggagtgtgggcagctggaa
ttatagaagacacagccccacgtgagaccagcaacaacacggtcactggg
actaactgggtgacctggcggggatgggaaaggaaaggagctgcagagcc
ccacagtccttcacctggtcaccgtgtctaggtttgtgaggcactgggac
acttgaggggtccgtgatgctacaaccgtattttccagtagaggataagc
tcacagtgtgccgaaggacaactgaatcttagagacggggagaggtggta
ggttgtcatgcccgccctccccccccaccccaccctcgatctgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_126726660_126727799
seq2: B6Ng01-185F14.b_46_1209

seq1  GAATTCAGACTGATTCTCCTCTTCACTCCTGGACGCCTCCACGGCAGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACTGATTCTCCTCTTCACTCCTGGACGCCTCCACGGCAGCCT  50

seq1  GGGAGCCCAAGCTCCCCTCTGATTGACCAGGCTGACTTTAAGACTAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCCAAGCTCCCCTCTGATTGACCAGGCTGACTTTAAGACTAGAAA  100

seq1  CTCATCTACCCACCATGCTCCAGCCGCCCCAACCCTCTGTGCTTCATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTACCCACCATGCTCCAGCCGCCCCAACCCTCTGTGCTTCATCCT  150

seq1  TTCTCTCCATCCCAGAAATCATCCCACAGTGTAGGAAACCTTTTAGCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCATCCCAGAAATCATCCCACAGTGTAGGAAACCTTTTAGCTGC  200

seq1  TCATGGGTACCTTTCATAAGGCAGACATTCAGGGCCTGCATCACTCCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGTACCTTTCATAAGGCAGACATTCAGGGCCTGCATCACTCCACA  250

seq1  CTGGCATGTAAGACGTGCCAGCGCACCTTGAATGATAACAAATATTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATGTAAGACGTGCCAGCGCACCTTGAATGATAACAAATATTTGTT  300

seq1  CAATGACTGCACAGCAAGAACGCTGCCCAAGCTCTATGTTTGCTTTCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGACTGCACAGCAAGAACGCTGCCCAAGCTCTATGTTTGCTTTCCCC  350

seq1  GGGGAAGATTGCTATCTCTTCACGCCTCTGCTCACCAATGCCCCTTCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGATTGCTATCTCTTCACGCCTCTGCTCACCAATGCCCCTTCCAA  400

seq1  CTCTCCTTTCCTCCAGTATTTCTCTGCTGGTCATGATTGTGATTGTGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTTCCTCCAGTATTTCTCTGCTGGTCATGATTGTGATTGTGGTT  450

seq1  GTTGCTGTTGCTGTTGTTAGTGGTGGCTTTGTTTTGTTTGCATCAAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGTTGCTGTTGTTAGTGGTGGCTTTGTTTTGTTTGCATCAAACTT  500

seq1  GCTGTAGTCTGGTATCATCTGAGAAGAGGGACCCACAAATAAGAAAATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGTCTGGTATCATCTGAGAAGAGGGACCCACAAATAAGAAAATGC  550

seq1  CCCCATCAGATTGTCTGTGGGCAGGTCTGTGGGACATTTTCTTGATTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCAGATTGTCTGTGGGCAGGTCTGTGGGACATTTTCTTGATTGAT  600

seq1  TAATGTGGAAAGGCCCAGCCCACTGTAGGGTGAGCCACCCCTGGGCAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGGAAAGGCCCAGCCCACTGTAGGGTGAGCCACCCCTGGGCAGGT  650

seq1  GGTTCTGGGTTGTGTAAGAAAGCAGGCTGAGCAAGCCAGGAGAAGCAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGGGTTGTGTAAGAAAGCAGGCTGAGCAAGCCAGGAGAAGCAAGC  700

seq1  CAGTAAGCAGCACCCTTCATGGCCGCTGCCTGCTGCCTCCACTGCTTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGCAGCACCCTTCATGGCCGCTGCCTGCTGCCTCCACTGCTTCTC  750

seq1  TTCCTGCCTCCAGGCTCCCTGACCTGAGCTTCTGCCTGGATTTCCCTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCCTCCAGGCTCCCTGACCTGAGCTTCTGCCTGGATTTCCCTCCA  800

seq1  TGGTGAACTATAAACCTTAAGCTGAAACACACCTAGATTGATTTTAGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAACTATAAACCTTAAGCTGAAACACACCTAGATTGATTTTAGTCA  850

seq1  TCGTCTTTACCCCAGCATCAGGAAGCAAAGCCCCCACCCCC-TCCCCGCT  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCGTCTTTACCCCAGCATCAGGAAGCAAAGCCCCCACCCCCTTCCCCGCT  900

seq1  AA-CCCCTG-AGTTCAATTCCTGACT-CTTGGAATTCATTTTT--CCAGT  944
      || |||||| |||||||||||||||| ||||||||||||||||  | |||
seq2  AACCCCCTGAAGTTCAATTCCTGACTCCTTGGAATTCATTTTTTCCAAGT  950

seq1  GAAGGCCCTTAGCAG-AAATTTG-TTTTTGCTTTTATGTGT-CTGAGAAA  991
      ||||||||||||||| ||||||| ||||||| ||||||||| ||||||||
seq2  GAAGGCCCTTAGCAGAAAATTTGTTTTTTGCCTTTATGTGTCCTGAGAAA  1000

seq1  AACAAAAAACAAAACAAAACAAAAC-AAAAAAAGT-CTTTTTCC-TCTGA  1038
      ||| |||||||||||||||| |||| ||||||||| |||||||| |||||
seq2  AACCAAAAACAAAACAAAACTAAACTAAAAAAAGTCCTTTTTCCTTCTGA  1050

seq1  --TTTGTTTATTGAAACAGGGT--CTTAC-TTCATAGCCC-AGAAATACT  1082
        ||||||||||||||||||||   |||| |||||||||| |||||||||
seq2  TTTTTGTTTATTGAAACAGGGTTCTTTACTTTCATAGCCCAAGAAATACT  1100

seq1  --GCCTCCAAACCCAGTTATTCTCCTGCCT-GAAACTCCCACGT--GCTG  1127
        |||| ||||||||||||||||| ||| | || ||||||||||   |||
seq2  TGGCCT-CAAACCCAGTTATTCTCTTGCTTGGATACTCCCACGTTGCCTG  1149

seq1  GG-ATTGTC-TACCA  1140
      || |||||| |||||
seq2  GGAATTGTCTTACCA  1164

seq1: chr8_126873471_126874165
seq2: B6Ng01-185F14.g_68_763 (reverse)

seq1  CATCAGATCGGGGGTGGGGTGGGGGGGGAGGGC-GGCATGACAACCTACC  49
      |||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  CATCAGATCGAGGGTGGGGTGGGGGGGGAGGGCGGGCATGACAACCTACC  50

seq1  ACCTCTCCCCGTCTCTAAGATTCAGTTGTCCTTCGGCACACTGTGAGCTT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCCCCGTCTCTAAGATTCAGTTGTCCTTCGGCACACTGTGAGCTT  100

seq1  ATCCTCTACTGGAAAATACGGTTGTAGCATCACGGACCCCTCAAGTGTCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTACTGGAAAATACGGTTGTAGCATCACGGACCCCTCAAGTGTCC  150

seq1  CAGTGCCTCACAAACCTAGACACGGTGACCAGGTGAAGGACTGTGGGGCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCTCACAAACCTAGACACGGTGACCAGGTGAAGGACTGTGGGGCT  200

seq1  CTGCAGCTCCTTTCCTTTCCCATCCCCGCCAGGTCACCCAGTTAGTCCCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCTCCTTTCCTTTCCCATCCCCGCCAGGTCACCCAGTTAGTCCCA  250

seq1  GTGACCGTGTTGTTGCTGGTCTCACGTGGGGCTGTGTCTTCTATAATTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCGTGTTGTTGCTGGTCTCACGTGGGGCTGTGTCTTCTATAATTCC  300

seq1  AGCTGCCCACACTCCCCAGTCCACAACACTATTTGGTCTGTTTTGTGCTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCCACACTCCCCAGTCCACAACACTATTTGGTCTGTTTTGTGCTA  350

seq1  ATTTGAGGTTCTGCTGCCCTCTGCTGGCCAGACCGGGAACAGCCTCACCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGGTTCTGCTGCCCTCTGCTGGCCAGACCGGGAACAGCCTCACCC  400

seq1  AGAGGTAGGGACATTTCCCAGGAAAGAAAGGCAAAAAAACCTAGGTTTAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAGGGACATTTCCCAGGAAAGAAAGGCAAAAAAACCTAGGTTTAG  450

seq1  AAGATCATGGGATCCAGGTAAGATCAGGCTGTCAGATCTGTTGCTGTGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCATGGGATCCAGGTAAGATCAGGCTGTCAGATCTGTTGCTGTGTT  500

seq1  GTTACCCTGACACTTTTGAGGTTAGACACAGCACCTAAACCTGCCCCTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCCTGACACTTTTGAGGTTAGACACAGCACCTAAACCTGCCCCTCT  550

seq1  CCCAGGCCCAGTTCAGTCCACCCATTCCAGGGCAATAGCCTTGGATTCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCCCAGTTCAGTCCACCCATTCCAGGGCAATAGCCTTGGATTCTT  600

seq1  AGGTACCCTATACTCTAATGTCCTTAGAGGCCTCAGTGACTCCTTCTCAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACCCTATACTCTAATGTCCTTAGAGGCCTCAGTGACTCCTTCTCAA  650

seq1  GATCTTCAGATATTGTGCTTGGCTGCATGGGATCATAAAGGAATTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCAGATATTGTGCTTGGCTGCATGGGATCATAAAGGAATTC  696