BAC Information

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BAC

Clone NameB6Ng01-188P17
Chromosome8 (Build37)
Map Location 7,101,645 - 7,272,451
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665127, EG546032
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188P17.bB6Ng01-188P17.g
ACCGA013125GA013126
length1,105909
definitionB6Ng01-188P17.b B6Ng01-188P17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,101,645 - 7,102,740)(7,271,541 - 7,272,451)
sequence
gaattccagccgtgtgtatcctccagcaaattttcacattgtatactgga
cactttctcactgtgcctgggacctttccacatcaaattctgagtcactc
aatcttgttttaacaggacctcctttgctgaaaagtttatatttttcact
aacatagaattttctttactaacttaaatgaatgttgagggtatactcaa
aaatatgactatttaaagaaattgatttgatggcttgattcaaggtttat
tttcacacacagatacgtttcttatgtctctattgtaatgctattctctg
aaatactttggaggatgatacatgaaaaataacaagtgagcttagtggac
taaaataaaattccattagttgcaaacagagaggatagcaatgatgagca
cattttctggcaaatagacccagcctccaccagtaatcagatcatgctat
taaaactctatgtccttgtttccctgaaggactagcactgctacagctag
tgagattatgaggagcttgcaaattaagtatggaagggtgatctatcctc
tgtcatgaagggagtaaatagagtacaaaattgagttatccaacataaga
gtatttatcaaaaacatcaaattaagcctcggattcttgttataggtcta
tcctgtctataaatctaagtacataaaagtaaacattagtaaaatattga
gtagatataaggccatttcaagaaatgcagcccaaccctgtttggtttca
gctgacatgtatcgtctgtgactctattttcttctaaggagccatgtttc
ttgacattggtttgcttgagggtttttccatacgctattgtatatcctgt
gttctttctttttctaatattgttgaaataaagaagcaatcctgtacgag
tgataccataaacagtttctccaataaagtcagttcaattgatagtatgt
ggtatcaaaagttaacatgtgcctcttaaacttccatagaatcgatatct
tagtataatggcaagatgagaggcatatttttttagatgcagaagatcct
gagaaattttagagattagatgtcttgaagtcaatagttcactggaaggt
ataaa

gaattcctcatttggattctgcaatgtggaagcccagttctgagaagcag
aagaaaatagaacaagacagaaagtgtttgtgatgaataagattggatac
atgcacactgatatctcatacttgctcttcttttaaatagcatttgtctt
tgagtgcctgagactccatctttctgtaagtaccctggtttagaacttct
tatgcactaacaaaatctcaaaaatcctaaatgagaaagatcttaatggc
tggagcagttgttccagcttctatgctgatgttttttcatttttgttttt
gtctttgttttgttttgtttttatcaccatatttttgaatgatttcccag
caagtagtttctatcatgttttcaattgcacccaggagctttaaattcta
aactggctataaacctggaattcctcatttggattctgcgatgtggaagc
ccagttctgagaagttgatgctgtcatgtttaccctgagccatgaagata
gaggaacatcgcactctggaatgggctcttctctatttctggtctttcaa
tgttttctgatacatcaaggtaggtgctaggagtgaacgaggcaagttca
taggcataagcaatgggaagaaatccataatatatctataaacccctttt
gaaaatgattactcatatttaaatatgaaagaacgatataattctcatga
tgtatgcaaagtagaccaggggaatatgaaaagaaaattctgtcatgata
atcaagtagcagattttaatcaaattagacgtaattaatcttacctttca
aattggccattaaaaataaattataaattgcatagcagtacactactcaa
tgatctctaggaaaagacactggttgacccaagtgtatcaaaaatggagg
ggttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_7101645_7102740
seq2: B6Ng01-188P17.b_43_1147

seq1  GAATTCCAGCCGTGTGTATCCTCCAGCAAATTTTCACATTGTATACTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCCGTGTGTATCCTCCAGCAAATTTTCACATTGTATACTGGA  50

seq1  CACTTTCTCACTGTGCCTGGGACCTTTCCACATCAAATTCTGAGTCACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCTCACTGTGCCTGGGACCTTTCCACATCAAATTCTGAGTCACTC  100

seq1  AATCTTGTTTTAACAGGACCTCCTTTGCTGAAAAGTTTATATTTTTCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGTTTTAACAGGACCTCCTTTGCTGAAAAGTTTATATTTTTCACT  150

seq1  AACATAGAATTTTCTTTACTAACTTAAATGAATGTTGAGGGTATACTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGAATTTTCTTTACTAACTTAAATGAATGTTGAGGGTATACTCAA  200

seq1  AAATATGACTATTTAAAGAAATTGATTTGATGGCTTGATTCAAGGTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGACTATTTAAAGAAATTGATTTGATGGCTTGATTCAAGGTTTAT  250

seq1  TTTCACACACAGATACATTTCTTATGTCTCTATTGTAATGCTATTCTCTG  300
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTCACACACAGATACGTTTCTTATGTCTCTATTGTAATGCTATTCTCTG  300

seq1  AAATAGTTTGGATGATGATACATGAAAAATAAGAAGTGAGCTTAGTGGAC  350
      ||||| |||||| ||||||||||||||||||| |||||||||||||||||
seq2  AAATACTTTGGAGGATGATACATGAAAAATAACAAGTGAGCTTAGTGGAC  350

seq1  TAAAATAAAATTCCATTAATTGCAAACAGAGAGTATAGCAATGATGAGCA  400
      |||||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  TAAAATAAAATTCCATTAGTTGCAAACAGAGAGGATAGCAATGATGAGCA  400

seq1  CATTTTCTGGCAAATAGACCCAGCCTCCACCAGTAATCAGATCATGCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTGGCAAATAGACCCAGCCTCCACCAGTAATCAGATCATGCTAT  450

seq1  TAAAACTCTATGTCCTTGTTTCCCTGAAGGACTAGCACTGCTACAGCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTCTATGTCCTTGTTTCCCTGAAGGACTAGCACTGCTACAGCTAG  500

seq1  TGAGATTATGAGGAGCTTGCAAATTAAGTATGGAAGGGTGATCTATCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTATGAGGAGCTTGCAAATTAAGTATGGAAGGGTGATCTATCCTC  550

seq1  TGTCATGAAGGGAGTAAATAGAGTACAAAATTGAGTTATCCAACATAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGAAGGGAGTAAATAGAGTACAAAATTGAGTTATCCAACATAAGA  600

seq1  GTATTTATCAAAAACATCAAATTAAGCCTCGGATTCTTGTTATAGGTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTATCAAAAACATCAAATTAAGCCTCGGATTCTTGTTATAGGTCTA  650

seq1  TCCTGTCTATAAATCTAAGTACATAAAAGTAAACATTAGTAAAATATTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTATAAATCTAAGTACATAAAAGTAAACATTAGTAAAATATTGA  700

seq1  GTAGATATAAGGCCATTTCAAGAAATGCAGCCCAACCCTGTTTGGTTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATATAAGGCCATTTCAAGAAATGCAGCCCAACCCTGTTTGGTTTCA  750

seq1  GCTGACATGTATCGTCTGTGACTCTATTTTCTTCTAAGGAGCCATGTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACATGTATCGTCTGTGACTCTATTTTCTTCTAAGGAGCCATGTTTC  800

seq1  TTGACATTGGTTTGCTTG-GGGTTTTTCCATACACTATTGTATATCCTTT  849
      |||||||||||||||||| |||||||||||||| |||||||||||||| |
seq2  TTGACATTGGTTTGCTTGAGGGTTTTTCCATACGCTATTGTATATCCTGT  850

seq1  GTTCTTTCTTTTTCT-ATATTGTTTGAAATAAAGAAGCAATCCTGTACAA  898
      ||||||||||||||| |||||| ||||||||||||||||||||||||| |
seq2  GTTCTTTCTTTTTCTAATATTG-TTGAAATAAAGAAGCAATCCTGTACGA  899

seq1  TTGATACCA-AAACAGTTTCTCCAATAAAGT-AGTTCAA-TGATA-TATG  944
       |||||||| ||||||||||||||||||||| ||||||| ||||| ||||
seq2  GTGATACCATAAACAGTTTCTCCAATAAAGTCAGTTCAATTGATAGTATG  949

seq1  TGGTATC-AAAGTTAA-ATGTGCCTCTT--ACCTCCCTAGAA-AGATATC  989
      ||||||| |||||||| |||||||||||  || ||| |||||  ||||||
seq2  TGGTATCAAAAGTTAACATGTGCCTCTTAAACTTCCATAGAATCGATATC  999

seq1  TTAGTATAATGGCAAAATTAGAAGCATA-TTTTTAAGATCCAGAGGAGCC  1038
      ||||||||||||||| || ||| ||||| ||||| |||| |||| || ||
seq2  TTAGTATAATGGCAAGATGAGAGGCATATTTTTTTAGATGCAGAAGATCC  1049

seq1  TGAGAAAATTTAAGAGATTTAGATGTCTTGAAGGCCAATA-TTCAATTGA  1087
      |||| |||||| ||||| |||||||||||||| | ||||| |||| | ||
seq2  TGAG-AAATTTTAGAGA-TTAGATGTCTTGAA-GTCAATAGTTCACTGGA  1096

seq1  AAGTATAAA  1096
      | |||||||
seq2  AGGTATAAA  1105


seq1: chr8_7271541_7272451
seq2: B6Ng01-188P17.g_65_973 (reverse)

seq1  AAAAAAAACCCTCCATTTTTGATACACTTGGGTCAACCAGTGTTCTTTTC  50
      ||||||| |||||||||||||||||||||||||||||||||| |||||||
seq2  AAAAAAACCCCTCCATTTTTGATACACTTGGGTCAACCAGTG-TCTTTTC  49

seq1  CTAGAGATCATTGAGTAGTCTACTGCCTATGCAATTTATAATTTATTTTT  100
      ||||||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  CTAGAGATCATTGAGTAGTGTACTG-CTATGCAATTTATAATTTATTTTT  98

seq1  AATGGCCAATTTGAAAGGTAAGATTAATTACTTCTAATTTGATTAAAATC  150
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AATGGCCAATTTGAAAGGTAAGATTAATTACGTCTAATTTGATTAAAATC  148

seq1  TGCTACTTGATTATCATGACAGAATTTTCTTTTCATATTCCCCTGGTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTTGATTATCATGACAGAATTTTCTTTTCATATTCCCCTGGTCTA  198

seq1  CTTTGCATACATCCTGAGAATTATATTGTTCTTTCATATTTAAATATGAG  250
      ||||||||||||| |||||||||||| |||||||||||||||||||||||
seq2  CTTTGCATACATCATGAGAATTATATCGTTCTTTCATATTTAAATATGAG  248

seq1  TAATCATTTTTAAAAGGGGTTTATAGCTATATTATGGATTTCTTCCCATT  300
      |||||||||| ||||||||||||||| |||||||||||||||||||||||
seq2  TAATCATTTTCAAAAGGGGTTTATAGATATATTATGGATTTCTTCCCATT  298

seq1  GCTTATGCCTATGAACTTGCCTTGTTCACTCCTAGCACCTACCTTGATTT  350
      |||||||||||||||||||||| ||||||||||||||||||||||||| |
seq2  GCTTATGCCTATGAACTTGCCTCGTTCACTCCTAGCACCTACCTTGATGT  348

seq1  ATCAGAAAACATTGAAAGACCAGAAATAGAGAAGAGCCCATTCCAGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAAACATTGAAAGACCAGAAATAGAGAAGAGCCCATTCCAGAGTG  398

seq1  TGATGTTCCTCTATCTTCATGGCTCAGGGTAAACATGACAGCATCAACTT  450
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGTTCCTCTATCTTCATGGCTCAGGGTAAACATGACAGCATCAACTT  448

seq1  CTCAGAACTGGGCTTCCACATTGCAGAATCCAAATGAGGAATTCCAGGCT  500
      ||||||||||||||||||||| |||||||||||||||||||||||||| |
seq2  CTCAGAACTGGGCTTCCACATCGCAGAATCCAAATGAGGAATTCCAGGTT  498

seq1  TATAGCCAGTTTAGAATTTAAAGCTCCTGGGTGCAATTGAAAACATGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCAGTTTAGAATTTAAAGCTCCTGGGTGCAATTGAAAACATGATA  548

seq1  GAAACTACTTGCTGGGAAATCATTCAAAAATATGGTGATAAAAACAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTACTTGCTGGGAAATCATTCAAAAATATGGTGATAAAAACAAAAC  598

seq1  AAAACAAAGACAAAAACAAAAATGAAAAAACATCAGCATAGAAGCTGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAGACAAAAACAAAAATGAAAAAACATCAGCATAGAAGCTGGAA  648

seq1  CAACTGCTCCAGCCATTAAGATCTTTCTCATTTAGGATTTCTGAGATTTT  700
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAACTGCTCCAGCCATTAAGATCTTTCTCATTTAGGATTTTTGAGATTTT  698

seq1  CTTATTGCATAAGAAGTTCTAAACCAGGGTACTTACAGAAAGATGGAGTC  750
       ||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGCATAAGAAGTTCTAAACCAGGGTACTTACAGAAAGATGGAGTC  748

seq1  TCAGGCACTCAAAGACAAATGCTATTTAAAAGAAGAGCAAGTATGAGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCACTCAAAGACAAATGCTATTTAAAAGAAGAGCAAGTATGAGATA  798

seq1  TCAGTGTGCATGTATCCAATCTTATTCATCACAAACACTTTCTGTCTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTGCATGTATCCAATCTTATTCATCACAAACACTTTCTGTCTTGT  848

seq1  TCTATTTTCTTCTGCTTCTCAGAACTGGGCTTCCACATTGCAGAATCCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTCTTCTGCTTCTCAGAACTGGGCTTCCACATTGCAGAATCCAA  898

seq1  ATGAGGAATTC  911
      |||||||||||
seq2  ATGAGGAATTC  909


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