BAC Information

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BAC

Clone NameB6Ng01-189K14
Chromosome8 (Build37)
Map Location 100,183,642 - 100,184,784
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC333331, LOC546090, LOC636859
Downstream geneEG384885, LOC100041173, EG636915
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189K14.bB6Ng01-189K14.g
ACCGA013623GA013624
length1,1511,219
definitionB6Ng01-189K14.b B6Ng01-189K14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatctctaagacttagtctttttccagaagacagaaatcaaaa
ggatacttgtcgtgaaataccactatgggttcataataagaaaacccatg
gtacaattactttgctatcataaaccacagaactcaggttctgagatgag
gactcaaatgttgaagggtgaactctaaagggtgagaggggtcttaaagg
ctcaaaagaaaatcatcactcaaagatcaggggtcagtggatgtcttaga
gatgagatgaaatgtttaaatacagactaaaggcatgagtgtatctgtca
agataaagatccttacattagaattaacacactggtacaagttatacgat
tcttctgtaccttaggttcttcactgccattatgatgataaatgcataat
gtgtctatgatggtgacaggtatatgcgtaaatagtgtctggcaagcagc
aaatactatggaagtgtgtggttgttagtgttcctattgtatctgtatgg
cagtaagcaatgggaaaattaaaacattcaccaggaagaagtgggggaag
aggcacttctgggtcattacaataatcaaaataaaagtaaaggactgaat
tctgaaaagaaagagatcttgaatttgaagaagcatatttgagatagaag
tgagagcataataaggtaaatatattgtatattacccagtcagacattat
actctgaaaatgaggttttaaagaatgagacattagacaaagatggttct
ctgagacagtaagtcacaatatcagtatcagattagggttcagtttaagc
aatgtggtatgaaaacagacattcatgaagattactaatttcatggatat
gttgttttaacctttttgacaaaatcatacactaacagagctctttcaag
cactgacctagccctttgaactgaaaacatttttctatagaggaggccag
agaattgaatgtggggctctcatggtttatgaaggactgctcattagcta
taggttcacttgttcacattctggagtcaaagacaatataatatgtagtt
actgagcccaactcttattgagattaattttatttacaaaacagggggct
aaagagttcatctatcctcaagtttttttctatttctcatctttaaaaga
t
gaattctcacctgaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgatggcgaggatgtggagaaagaggaacacttctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctcc
aaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttttaatagccagaagctggaaagaacccagat
ttccctcaacagaggaatggatacaaaagatgtggtacgtttacacaatg
gagtactactcagctattaaaaagaatgaatttacgaaattcctaggcaa
atggttggacctggagggcatcatcctgaatgaggtaacccaatcacaaa
agaactcaaatgaaatgtactcactgataagtggatattaacccagaaac
ttagtatagtgagatataaggtacaatatgtaaaacatatgaaactgaag
aagaatgaagaccaaagtgtggacactttgctcattcttagaattggaac
caatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggatgggtccatctagagactgccatatccagggatccatcccataatt
agcctccaaacgatgacaccattgcatacactagcaagcctttgttgcaa
ggacggtgatatagctgtcccttgtgagactaggccggggcctagcaaac
acagaagtggatgctcacagtcaactattggatggatcacagggccccca
atgggaggagctaggagaaattatccaaggagctaaagagatcctgcaac
ccttatcggaggaacacattatgaacctaaccagttaccccagagctctg
actcttagctgcattatggttatcaaaagatggtcctagtcaagccatcc
actgggtaaaggagagggtccaatcagtccatgccataacatatatatgc
caagttaccaggaacgctcaggctcaatatgtgtaattgggtgtgtgtct
acgagaggatgatggtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_100183642_100184784
seq2: B6Ng01-189K14.b_52_1202 (reverse)

seq1  ATCTTTTAAAATTATGAGAAATAG-AAAAACTTTGAGGATAGATGAAACT  49
      ||||||||||   ||||||||||| |||||  ||||||||||||| ||||
seq2  ATCTTTTAAA--GATGAGAAATAGAAAAAAACTTGAGGATAGATG-AACT  47

seq1  CTTTTAGCCCCCTGTTTTTGTAAATAAAATTTATCTCAAT-AGAGTTGGG  98
      | |||||||||||| |||||||||||||||| |||||||| |||||||||
seq2  C-TTTAGCCCCCTG-TTTTGTAAATAAAATTAATCTCAATAAGAGTTGGG  95

seq1  CTCAGTTACTTACATA-TATATTGTCTTTGACCTCAGAATTGTGA--CAG  145
      |||||| || |||||| |||||||||||||||  ||||| |||||   ||
seq2  CTCAGTAAC-TACATATTATATTGTCTTTGACTCCAGAA-TGTGAACAAG  143

seq1  TGAACCTATAGCT-ATGAGCAGTCC-TCATAAACCATGAGAGCCCCACAT  193
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  TGAACCTATAGCTAATGAGCAGTCCTTCATAAACCATGAGAGCCCCACAT  193

seq1  TC-ATTCTCT-GCCT-CTCTATAG-AAAATGTTTTCAGTTC-AAGGGCTA  238
      || ||||||| |||| |||||||| |||||||||||||||| ||||||||
seq2  TCAATTCTCTGGCCTCCTCTATAGAAAAATGTTTTCAGTTCAAAGGGCTA  243

seq1  GGTCAGTGCTTG-AAGAGCTCTGTTAGTGTATGATTTTGTC-AAAAGGTT  286
      |||||||||||| |||||||||||||||||||||||||||| ||||||||
seq2  GGTCAGTGCTTGAAAGAGCTCTGTTAGTGTATGATTTTGTCAAAAAGGTT  293

seq1  AAAACAACATATCCATG-AATTAGTAATCTTCATGAATGTCTGTTTTCAT  335
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAAACAACATATCCATGAAATTAGTAATCTTCATGAATGTCTGTTTTCAT  343

seq1  ACCACATTGCTTAAACTGAACCCTAATCTGATACTGATATTGTGACTTAC  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATTGCTTAAACTGAACCCTAATCTGATACTGATATTGTGACTTAC  393

seq1  TGTCTCAGAGAACCATCTTTGTCTAATGTCTCATTCTTTAAAACCTCATT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAGAGAACCATCTTTGTCTAATGTCTCATTCTTTAAAACCTCATT  443

seq1  TTCAGAGTATAATGTCTGACTGGGTAATATACAATATATTTACCTTATTA  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGTATAATGTCTGACTGGGTAATATACAATATATTTACCTTATTA  493

seq1  TGCTCTCACTTCTATCTCAAATATGCTTCTTCAAATTCAAGATCTCTTTC  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCACTTCTATCTCAAATATGCTTCTTCAAATTCAAGATCTCTTTC  543

seq1  TTTTCAGAATTCAGTCCTTTACTTTTATTTTGATTATTGTAATGACCCAG  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGAATTCAGTCCTTTACTTTTATTTTGATTATTGTAATGACCCAG  593

seq1  AAGTGCCTCTTCCCCCACTTCTTCCTGGTGAATGTTTTAATTTTCCCATT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCTCTTCCCCCACTTCTTCCTGGTGAATGTTTTAATTTTCCCATT  643

seq1  GCTTACTGCCATACAGATACAATAGGAACACTAACAACCACACACTTCCA  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACTGCCATACAGATACAATAGGAACACTAACAACCACACACTTCCA  693

seq1  TAGTATTTGCTGCTTGCCAGACACTATTTACGCATATACCTGTCACCATC  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTTGCTGCTTGCCAGACACTATTTACGCATATACCTGTCACCATC  743

seq1  ATAGACACATTATGCATTTATCATCATAATGGCAGTGAAGAACCTAAGGT  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACACATTATGCATTTATCATCATAATGGCAGTGAAGAACCTAAGGT  793

seq1  ACAGAAGAATCGTATAACTTGTACCAGTGTGTTAATTCTAATGTAAGGAT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGAATCGTATAACTTGTACCAGTGTGTTAATTCTAATGTAAGGAT  843

seq1  CTTTATCTTGACAGATACACTCATGCCTTTAGTCTGTATTTAAACATTTC  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCTTGACAGATACACTCATGCCTTTAGTCTGTATTTAAACATTTC  893

seq1  ATCTCATCTCTAAGACATCCACTGACCCCTGATCTTTGAGTGATGATTTT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATCTCTAAGACATCCACTGACCCCTGATCTTTGAGTGATGATTTT  943

seq1  CTTTTGAGCCTTTAAGACCCCTCTCACCCTTTAGAGTTCACCCTTCAACA  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAGCCTTTAAGACCCCTCTCACCCTTTAGAGTTCACCCTTCAACA  993

seq1  TTTGAGTCCTCATCTCAGAACCTGAGTTCTGTGGTTTATGATAGCAAAGT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTCCTCATCTCAGAACCTGAGTTCTGTGGTTTATGATAGCAAAGT  1043

seq1  AATTGTACCATGGGTTTTCTTATTATGAACCCATAGTGGTATTTCACGAC  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTACCATGGGTTTTCTTATTATGAACCCATAGTGGTATTTCACGAC  1093

seq1  AAGTATCCTTTTGATTTCTGTCTTCTGGAAAAAGACTAAGTCTTAGAGAT  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCCTTTTGATTTCTGTCTTCTGGAAAAAGACTAAGTCTTAGAGAT  1143

seq1  ATGAATTC  1143
      ||||||||
seq2  ATGAATTC  1151