BAC Information

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BAC

Clone NameB6Ng01-191H06
Chromosome8 (Build37)
Map Location 88,810,265 - 88,810,831
singlet/doubletsinglet
Overlap genenone
Upstream geneVps35, Orc6l, D830007F02Rik, 4921524J17Rik, Gpt2, Dnaja2, Neto2, Itfg1, LOC100040798, Phkb, LOC671665, LOC100040165
Downstream geneAbcc12, Lonp2, Siah1a, ENSMUSG00000074178, BC004022, LOC666960, EG625298, EG330819
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191H06.bB6Ng01-191H06.g
ACCGA014941GA014942
length1,125714
definitionB6Ng01-191H06.b B6Ng01-191H06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatatatattgtatattat
tcccctatctgatttaggataggtaaagatcctttcccaatctgttggta
atctttctgtcttattgatggtgtcttttgccttgcagaagctttgcaac
tttatgaggtcccatttatcgattcttgatcttatagcacaagccattgt
ggttctatttaggaatttttcccctgtacccatatcttcgaggcttttcc
ctgctttctcctctataagtttcagtgtctctggttttatgtggagttcc
ttaatccactttgatttgactttaatacaaggagataggaatggatcaat
ttgcattcttctacatgataaccgccagttgtgccagcaccatttgttga
aaatgctgtcttttttccactggatggttttagctcccttgtcaaagatc
aagtgaccataggtgtgtgggttcatctctgtgtcttcaactctattcca
ttggtctacttgtctgttgctataccagtaccatgcagtttttatcacaa
ttgctctgtagtacagctttaggtcaggcatgatgattccaccagaggtt
cttttatttttgagaagagtttttgctatcctaggttttttattattcca
gatgaatctgtcgattaccctttctaattcgttgaagaattgagttgggg
attgcattgaatctgtagattgcttttggcaagacagccatttttactat
attgatcctaccaatccatgagcatgggagatctttccatcttctgagat
cttctttaatttctttcttcagagacttgaagttcttatcatacagatct
ttcacttccttagttagagtcatgccaagggtattttatattatttgtga
ctattgagaagggtgttggtttcctaatttctttctcagcctgtttattc
tttgcgcagaagaagggccattgacttgtttgaagttattttattatcct
ggctaccctccaccgtagcagtttatcagcttagagtctctggggggaac
tttagggcaccttacatccatacca
gaattccatcagcccaattcccaacaatgattcagtcgcagctgtgaatg
gaagtccaaggatctagcagttactcagtctcacgcagcaagcaggcgaa
ggagcaagagcaagagctcaactcccttcttccaatgtccttatattgtc
tccagcagaaggtgtagcccagattaaaggtgtgttccgccacaccttta
atcccagatgaaaggtgtagcccagattaaaggtgtgttccttaaactcg
gagattcaatcttctggaatccatagccactgtggctcaagatcttcaaa
ccaagatccagataaggatctccaagcctccagataagggtcactggtga
gccttccaattccggattgtagttcattccaaatattgtcaagttgacag
ccaggaatagccactacaagggtggacagtctagtttgtttctgttttct
gatatccctctccttggctggtggatgtctttatcagttgctctttgtgt
tgtcgtattccgttgcctgacagaaacaatctaaggggctgaagagcatt
ccttcacaggtttcagcccatcatgggaaggggagtgaggaagattagag
tagctcacattacagtagacatgaagaaagagggggttgctgtaggaagg
aaccttggtagggtacagccgagaaagagagagaggagaggagaggagag
gagaggagaggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_88810265_88810831
seq2: B6Ng01-191H06.g_212_778 (reverse)

seq1  TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCTCTCTTTCTCGGCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCTCTCTTTCTCGGCTGT  50

seq1  ACCCTACCAAGGTTCCTTCCTACAGCAACCCCCTCTTTCTTCATGTCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTACCAAGGTTCCTTCCTACAGCAACCCCCTCTTTCTTCATGTCTAC  100

seq1  TGTAATGTGAGCTACTCTAATCTTCCTCACTCCCCTTCCCATGATGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGTGAGCTACTCTAATCTTCCTCACTCCCCTTCCCATGATGGGCT  150

seq1  GAAACCTGTGAAGGAATGCTCTTCAGCCCCTTAGATTGTTTCTGTCAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTGTGAAGGAATGCTCTTCAGCCCCTTAGATTGTTTCTGTCAGGC  200

seq1  AACGGAATACGACAACACAAAGAGCAACTGATAAAGACATCCACCAGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGAATACGACAACACAAAGAGCAACTGATAAAGACATCCACCAGCCA  250

seq1  AGGAGAGGGATATCAGAAAACAGAAACAAACTAGACTGTCCACCCTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGGATATCAGAAAACAGAAACAAACTAGACTGTCCACCCTTGTA  300

seq1  GTGGCTATTCCTGGCTGTCAACTTGACAATATTTGGAATGAACTACAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTATTCCTGGCTGTCAACTTGACAATATTTGGAATGAACTACAATC  350

seq1  CGGAATTGGAAGGCTCACCAGTGACCCTTATCTGGAGGCTTGGAGATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAATTGGAAGGCTCACCAGTGACCCTTATCTGGAGGCTTGGAGATCCT  400

seq1  TATCTGGATCTTGGTTTGAAGATCTTGAGCCACAGTGGCTATGGATTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGATCTTGGTTTGAAGATCTTGAGCCACAGTGGCTATGGATTCCA  450

seq1  GAAGATTGAATCTCCGAGTTTAAGGAACACACCTTTAATCTGGGCTACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTGAATCTCCGAGTTTAAGGAACACACCTTTAATCTGGGCTACAC  500

seq1  CTTTCATCTGGGATTAAAGGTGTGGCGGAACACACCTTTAATCTGGGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATCTGGGATTAAAGGTGTGGCGGAACACACCTTTAATCTGGGCTA  550

seq1  CACCTTCTGCTGGAGAC  567
      |||||||||||||||||
seq2  CACCTTCTGCTGGAGAC  567