BAC Information

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BAC

Clone NameB6Ng01-191K03
Chromosome8 (Build37)
Map Location 71,908,446 - 71,909,261
singlet/doubletsinglet
Overlap genenone
Upstream gene4732435N03Rik, Ints10, Lpl, LOC100041138, Slc18a1, Atp6v1b2, Lzts1, EG665540, D10627, LOC665553, D130040H23Rik, LOC665561
Downstream geneLOC670593, EG665578, LOC622336, LOC100041482, LOC673968, AI449175, EG636741, 1200003I07Rik, D330038O06Rik, Atp13a1, Gmip, Edg4, Pbx4, Cilp2, BC028663, Ndufa13, Tssk6, Gatad2a, LOC665649, 9130404D08Rik, Sf4, Tm6sf2, Hapln4, Ncan, Rfxank, 2310073E15Rik, 2310045N01Rik, Mef2b, Tmem161a, Slc25a42, Armc6, Sfrs14, Homer3, Ddx49, Cope, Lass1, Upf1, Comp, Crtc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191K03.bB6Ng01-191K03.g
ACCGA015075GA015076
length1,240984
definitionB6Ng01-191K03.b B6Ng01-191K03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcatctctgagctccattttttaatggggttatttaatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggagaggtaaagatcctttcccaatctgttggtagcct
ttttgtcttattgatcgtgtcttttgccttacagaagctttgcagtttca
tgaggtcccatttgtccaatctcgatcttacagcacaagccttttctatt
cagaaatttttcccctgtggccatatcttcagggcttttccccactttct
cctctataagtttcagtgtctctggttttatgtggagttccttgaaccac
ttagatttgaccttagtacaaggagataggaatgggtcgatttgcattct
tctacatgttaacaaccagttgtgccagcaccatttgttgaaaacgctgt
ctttcttccacttgatggttttagctcccttgttgaagatcaagtgacca
taggtgtgtgggttcatttctgggtcttcaattctattccattagtctac
ttgtctgtcactataccagtaccatgcatttttttatcacaattgctctg
cagtaaagctttaggtcaggcatggtgattccaccagaggttctttcatc
cttgagaagagtttttgctatcctaggtttctttgttattccagaagaat
ttgcagattgctctttctgattctttgaaaaattgagttggaaatttgat
ggagattgcattgaatctgtagattgcttttggcaagatagccattttta
ctatattgatcctgcctatccatgagcatgggagatctatccatcttctg
agatcttctttaatttctttcttcagagacttgaagttcttatcatacag
atcttgcacttccttagttagagtcacaccaaggtattttatattatttt
gtgactattgagaagggtgttgtttccctaatatcttttctcagcctgtt
ttatctttgttgtagagaaaggctattgacttgtttgagttaatttttat
tatccagctacttcacgaagctgattattcagtttagagttctctggtgg
atttttaaggttcacttatattgtactatccatatacatctggcaaagat
gaatttttgaactcaaccttttccaatgatccttgaattccgttgtgtga
atcgctctgctcaggaacatctcaggtacttactgagttg
gaattcttggatggagcaaacacagtgatataagtgtaggaagagataaa
attggtttctcagtgagcagagagagtgagtcacatggtggctcagcatg
caagaaacttaaaggaacataggggaagcctgaggtcaaagatgctggga
tcccctgttgtgaaaagagacaggatggctgttctaaggcagagagccag
acagtaaaagctgcctgcttcctacaagcaagtaatcataggatagaatt
ttaaagtttggtttaattgcttttaaagacaaaagagaatacagattttt
gagagaacagatttttgcaagcatcatcaaaagcacacaaaaaaccaaag
agagatttcatatgttaaagattagatacactggtcaagaaatatattaa
atctaaaataattcctgaccccccccccaaaaaaaaatccagaaaatctg
ggacaccatgaaaagtctaaacctaaggataataggaacagaggaagaat
accaacccaaaggcacagaaaaatattttaaacaaaattttcataaccaa
agaaagagaagcctataaatgtatatataagaagcatacagaacaccaaa
cagattgaaccagaaaagatatttcctcaccacataataatcaaaacact
aacacagagaacaaagaaagaatattgaaagcttcaagaggacaggagag
gtggagcagctgggacaggatccttcctgtctccatctgaacccaggagc
tgaggctgttccacagcgctctgtgatgggccctgccagggtgagctgtt
ctcccagaagtgctgacactgacttacaagcccacaggaggggcaagctc
aagccagagacagtaagacaaactagcaccagagatagccagatgaagaa
agggaaagtgcaagaactttaccaacaaaaaccaagctacatggcatcat
caggaacatagttttcccacaaccagtaagtcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_71908446_71909261
seq2: B6Ng01-191K03.g_65_880

seq1  GAATTCTTGGATGGAGCAAACACAGTGATATAAGTGTAGGAAGAGATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGATGGAGCAAACACAGTGATATAAGTGTAGGAAGAGATAAA  50

seq1  ATTGGTTTCTCAGTGAGCAGAGAGAGTGAGTCACATGGTGGCTCAGCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTTCTCAGTGAGCAGAGAGAGTGAGTCACATGGTGGCTCAGCATG  100

seq1  CAAGAAACTTAAAGGAACATAGGGGAAGCCTGAGGTCAAAGATGCTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAACTTAAAGGAACATAGGGGAAGCCTGAGGTCAAAGATGCTGGGA  150

seq1  TCCCCTGTTGTGAAAAGAGACAGGATGGCTGTTCTAAGGCAGAGAGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGTTGTGAAAAGAGACAGGATGGCTGTTCTAAGGCAGAGAGCCAG  200

seq1  ACAGTAAAAGCTGCCTGCTTCCTACAAGCAAGTAATCATAGGATAGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAAAGCTGCCTGCTTCCTACAAGCAAGTAATCATAGGATAGAATT  250

seq1  TTAAAGTTTGGTTTAATTGCTTTTAAAGACAAAAGAGAATACAGATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTTTGGTTTAATTGCTTTTAAAGACAAAAGAGAATACAGATTTTT  300

seq1  GAGAGAACAGATTTTTGCAAGCATCATCAAAAGCACACAAAAAACCAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAACAGATTTTTGCAAGCATCATCAAAAGCACACAAAAAACCAAAG  350

seq1  AGAGATTTCATATGTTAAAGATTAGATACACTGGTCAAGAAATATATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTTCATATGTTAAAGATTAGATACACTGGTCAAGAAATATATTAA  400

seq1  ATCTAAAATAATTCCTGACCCCCCCCCCAAAAAAAAATCCAGAAAATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAATAATTCCTGACCCCCCCCCCAAAAAAAAATCCAGAAAATCTG  450

seq1  GGACACCATGAAAAGTCTAAACCTAAGGATAATAGGAACAGAGGAAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCATGAAAAGTCTAAACCTAAGGATAATAGGAACAGAGGAAGAAT  500

seq1  ACCAACCCAAAGGCACAGAAAAATATTTTAAACAAAATTTTCATAACCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCCAAAGGCACAGAAAAATATTTTAAACAAAATTTTCATAACCAA  550

seq1  AGAAAGAGAAGCCTATAAATGTATATATAAGAAGCATACAGAACACCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGAAGCCTATAAATGTATATATAAGAAGCATACAGAACACCAAA  600

seq1  CAGATTGAACCAGAAAAGATATTTCCTCACCACATAATAATCAAAACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGAACCAGAAAAGATATTTCCTCACCACATAATAATCAAAACACT  650

seq1  AACACAGAGAACAAAGAAAGAATATTGAAAGCTTCAAGAGGACAGGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGAGAACAAAGAAAGAATATTGAAAGCTTCAAGAGGACAGGAGAG  700

seq1  GTGGAGCAGCTGGGACAGGATCCTTCCTGTCTCCATCTGAACCCAGGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGCAGCTGGGACAGGATCCTTCCTGTCTCCATCTGAACCCAGGAGC  750

seq1  TGAGGCTGTTCCACAGCGCTCTGTGATGGGCCCTGCCAGGGTGAGCTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTGTTCCACAGCGCTCTGTGATGGGCCCTGCCAGGGTGAGCTGTT  800

seq1  CTCCCAGAAGTGCTGA  816
      ||||||||||||||||
seq2  CTCCCAGAAGTGCTGA  816