BAC Information

Click to search

BAC

Clone NameB6Ng01-194P01
Chromosome8 (Build37)
Map Location 77,751,807 - 77,752,871
singlet/doubletsinglet
Overlap genenone
Upstream geneIsx, Hmgb2l1, Tom1, LOC100039134, Hmox1, Mcm5, Rasd2
Downstream geneLOC675507, LOC384845, LOC666211, LOC100039229, 1700007B14Rik, LOC666036
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194P01.bB6Ng01-194P01.g
ACCGA017496GA017497
length1,062735
definitionB6Ng01-194P01.b B6Ng01-194P01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttatctggctctgctctttctctcttctggaatttataagaac
cattcttctagtggagttctgttttgcaactctttctctttttctcctca
gactcagagatttgcttcaagcttcactgtcttcctgcaaacagcttggt
gcgcttgctttccaattccgtcatgtgggaacagcttctgccactccaca
agcaaatgatccggagtctctaaagtatacataaacttcctctcttctac
gttcccccaaagtctcttatctctaaggttttcctactttccattctttt
tgtttgtttgtttgtttttgttttttcgagtcagggtttctctgtatagc
cctggctgtcctggaactcactttgtagaccaggctggcctcgaactcag
aaatccgcctttctctgcctcccaagtgctgggattaaaggcatgcacca
ccactgcccagctacttttaaaaatctttcatctctatgatttatttgtt
ctctgctctaaaaaaacaagtctcttagaaccatgttgtaaactctctca
ggattcgtaagttcatcgggtatggtttaaaaaaaaaaaaaaaggatctc
taaaatttgtaaccaaaagtcatcttaaatcctgtaaccaaagttgataa
tttataaatctatacataggtaatattaattagctatgatatattatata
tgtgattcaactcttgcttaataaaatagatatttttaaatagcaaccac
atgattccctccatcttggctgatgacctaatcaggatggaagcaaccat
gtggttggcatcaggttaaaagagagtgataaataaaggtttatgaattc
cctaaggttataaatgtataagcaaacctgacttaagagatctatatact
accacttatgtctttgctaattgcttaacatcaagcttctgaaaagttta
attaaggacaactgttttttttaaaaaggaactattttttttattttatg
tatatgagtacctaatatatatctcagacacaccagtagaagcatcggat
cccatacagatg

gaattctagaaactctttaatttctttctttatttcttccctgaccaagt
gatcattgagtagagaattgttctgtttccatgagtatgtgggatttctg
ttgtttctgttgttgtgcaaattcagccttaatccaggatgatctcatta
gatgcaaagagttttttcaatcttcttgtctgctgaggcttgctttgtgc
ctgatttttatggtcaattttgaagaagagtccatgagaggctgagaaaa
aagtatattcattgaggggcagggaaagggtaaaaggttatatatctgtt
aaatccatttggttcataccatctgttagtttcattgtttctctgtttag
tttctgttttgatgatctgtccatttgtgagagtggggtgctgaaatcac
ccactattattatgtggggttaaatgtgtgatttgagctttagtgatatt
tcttttacaaatgcccttgcatttggggcatagacgttcagatttgagac
ttcttggtggatttttcctttgatgagaataaagtgttcttccccatatc
tgttgattacattttgttagaaattctattttattagatattagaatggc
tgctgtagcttgatttttggatccctttgcttggaaacctttgcattccc
tttactctgaggtagtatctctcttttttttctgaggtgtgttcctgaat
gcaatagaatgatggatcctgtttacatattcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_77751807_77752871
seq2: B6Ng01-194P01.b_46_1107

seq1  GAATTCCTTATCTGGCTCTGCTCTTTCTCTCTTCTGGAATTTATAAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATCTGGCTCTGCTCTTTCTCTCTTCTGGAATTTATAAGAAC  50

seq1  CATTCTTCTAGTGGAGTTCTGTTTTGCAACTCTTTCTCTTTTTCTCCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCTAGTGGAGTTCTGTTTTGCAACTCTTTCTCTTTTTCTCCTCA  100

seq1  GACTCAGAGATTTGCTTCAAGCTTCACTGTCTTCCTGCAAACAGCTTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGAGATTTGCTTCAAGCTTCACTGTCTTCCTGCAAACAGCTTGGT  150

seq1  GCGCTTGCTTTCCAATTCCGTCATGTGGGAACAGCTTCTGCCACTCCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTTGCTTTCCAATTCCGTCATGTGGGAACAGCTTCTGCCACTCCACA  200

seq1  AGCAAATGATCCGGAGTCTCTAAAGTATACATAAACTTCCTCTCTTCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATGATCCGGAGTCTCTAAAGTATACATAAACTTCCTCTCTTCTAC  250

seq1  GTTCCCCCAAAGTCTCTTATCTCTAAGGTTTTCCTACTTTCCATTCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCCCAAAGTCTCTTATCTCTAAGGTTTTCCTACTTTCCATTCTTTT  300

seq1  TGTTTGTTTGTTTGTTTTTGTTTTTTCGAGTCAGGGTTTCTCTGTATAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTGTTTTTGTTTTTTCGAGTCAGGGTTTCTCTGTATAGC  350

seq1  CCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAG  400

seq1  AAATCCGCCTTTCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCGCCTTTCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCACCA  450

seq1  CCACTGCCCAGCTACTTTTAAAAATCTTTCATCTCTATGATTTATTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCCCAGCTACTTTTAAAAATCTTTCATCTCTATGATTTATTTGTT  500

seq1  CTCTGCTCTAAAAAAACAAGTCTCTTAGAACCATGTTGTAAACTCTCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTCTAAAAAAACAAGTCTCTTAGAACCATGTTGTAAACTCTCTCA  550

seq1  GGATTCGTAAGTTCATCGGGTATGGTTTAAAAAAAAAAAAAAAGGATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCGTAAGTTCATCGGGTATGGTTTAAAAAAAAAAAAAAAGGATCTC  600

seq1  TAAAATTTGTAACCAAAAGTCATCTTAAATCCTGTAACCAAAGTTGATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTGTAACCAAAAGTCATCTTAAATCCTGTAACCAAAGTTGATAA  650

seq1  TTTATAAATCTATACATAGGTAATATTAATTAGCTATGATATATTATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAATCTATACATAGGTAATATTAATTAGCTATGATATATTATATA  700

seq1  TGTGATTCAACTCTTGCTTAATAAAATAGATATTTTTAAATAGCAACCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTCAACTCTTGCTTAATAAAATAGATATTTTTAAATAGCAACCAC  750

seq1  ATGATTCCCTCCATCTTGGCTGATGACCTAATCAGGATGGAAGCAACCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCCCTCCATCTTGGCTGATGACCTAATCAGGATGGAAGCAACCAT  800

seq1  GTGGTTGGCATCAGGTTAAAAGAGAGTGATAAAT-AAGGTTTATGAATT-  848
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  GTGGTTGGCATCAGGTTAAAAGAGAGTGATAAATAAAGGTTTATGAATTC  850

seq1  CCTAAGGTTATAAATGTATAAGCAAAACTGACTTAAGAGATCTATATACT  898
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTAAGGTTATAAATGTATAAGCAAACCTGACTTAAGAGATCTATATACT  900

seq1  ACCACTTATGTCTTTGCTAATTGCTTAACATCAAGCTTCTGAAAAGTTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTTATGTCTTTGCTAATTGCTTAACATCAAGCTTCTGAAAAGTTTA  950

seq1  AATAAGGAACAACTGTTTTTTTTAAAAAGGAACTATTTTTTTTTATTTTA  998
      | ||||| ||||||||||||||||||||||||||| ||||||||||||||
seq2  ATTAAGG-ACAACTGTTTTTTTTAAAAAGGAACTA-TTTTTTTTATTTTA  998

seq1  TGTATATGAGTACACTATATATATCTTCAGACACACCAGAAGAAGGCATC  1048
      |||||||||||||   ||||||||| ||||||||||||| |||| |||||
seq2  TGTATATGAGTACCTAATATATATC-TCAGACACACCAGTAGAA-GCATC  1046

seq1  GGATCCCATTACAGATG  1065
      |||||||| ||||||||
seq2  GGATCCCA-TACAGATG  1062


| Home | SequenceCutter | Blast | Download |