BAC Information

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BAC

Clone NameB6Ng01-195N05
Chromosome8 (Build37)
Map Location 31,218,591 - 31,413,665
singlet/doubletdoublet
Overlap geneEG628189
Upstream geneUnc5d, LOC100041237
Downstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195N05.bB6Ng01-195N05.g
ACCGA018135GA018136
length942700
definitionB6Ng01-195N05.b B6Ng01-195N05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,218,591 - 31,219,530)(31,412,968 - 31,413,665)
sequence
gaattcctattgccgtgcatgcatcaccagggacaggaaaagcaatgcag
catccccaaatgctacttcctaaggacctatggaatgattgtgaaaaaca
tccctttggaataccatgaaaaataagttaacaaataactgcctattaac
taaataacaaaataaatatgaaagtgtttttacttgctgttatatgctgc
aactagacattgactctccaaagaagagagatggagggctcactgagcaa
aagacaaaaataactgcaaagatggccaccaaaatttgaggaccacaata
caaaggaaatatatgaattataaaaattagaaaatgagactatggagcaa
agatgacacacccatacacaaaggagtcatgagagaattcctattagcct
tcagtacggggaatacttttaggtagtcaaagactcaggtagcctcccaa
taaattcatatgattttaaagtaggatgaaaactcttcctagatagccta
aagggaaaaggttgctaataaaaatatgcttttcaaattttgaaatgaaa
taacacattggtatgaaatgtactgaagagtcagtttcttaattctgaca
ggtaagctgaaacttcactttttttttcttttcttttctttttttttttt
ttttgctgttttttgctcaaactgtcatagagcttgcaatatagccaaca
ttgacctgagacccccatcagttctcctgcctgaacatctctaatgctgg
aattacaagcatgaatgcctggttgaaaatctactttttaagttaaaata
ataagtactagaatgaatgaaaaaaaaaaaactaagtagaatttttattg
cccacattgatcctacttaccttcaataaatgtccacgtgaaatagtagg
aggaataagttaaaacctaggattatagccccacccaatagc

gaattcactccatcataactagcacctgtgtttaaagcatttctgtttat
ttgttggtttgtttagtgtgtgttagtatgcatgtaccattgtatacatg
cggtagtcagtggttaacatacagggatggttctttccttccaccatgtt
ggttctgagaactctgatcatagggcctttattagctcaaccatcccatc
agtcaatatcttaagaattttatggggacataatggggattacaataagg
tcctttttcttgcaggacatgtgcttttttaaaaaaattattactattat
tattattattattattattattattattattattattatttggattttcg
agacagggtttctctgtgtagccttggctgtcctggaactcactttgtag
aacaggctggcctcgaactcagagagccacttgcctctgcctctcaagtg
ctgggattaaaggcgtgtgccacctcacccggccatgttttataagctga
actattcctttagcctgttcctcttattttttgaaaagtgacatgtatgt
caatttatatacctagacaatattacatatggatcagaataagaaagata
ttttgtatactttcaaatattgcataataaagggtgggttagaataagat
acttcaaaatacaagttttttattttctccattttgtagataaaccagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_31218591_31219530
seq2: B6Ng01-195N05.b_43_984

seq1  GAATTCCTATTGCCGTGCATGCATCACCAGGGACAGGAAAAGCAATGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTGCCGTGCATGCATCACCAGGGACAGGAAAAGCAATGCAG  50

seq1  CATCCCCAAATGCTACTTCCTAAGGACCTATGGAATGATTGTGAAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCAAATGCTACTTCCTAAGGACCTATGGAATGATTGTGAAAAACA  100

seq1  TCCCTTTGGAATACCATGAAAAATAAGTTAACAAATAACTGCCTATTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTGGAATACCATGAAAAATAAGTTAACAAATAACTGCCTATTAAC  150

seq1  TAAATAACAAAATAAATATGAAAGTGTTTTTACTTGCTGTTATATGCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAACAAAATAAATATGAAAGTGTTTTTACTTGCTGTTATATGCTGC  200

seq1  AACTAGACATTGACTCTCCAAAGAAGAGAGATGGAGGGCTCACTGAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGACATTGACTCTCCAAAGAAGAGAGATGGAGGGCTCACTGAGCAA  250

seq1  AAGACAAAAATAACTGCAAAGATGGCCACCAAAATTTGAGGACCACAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAAATAACTGCAAAGATGGCCACCAAAATTTGAGGACCACAATA  300

seq1  CAAAGGAAATATATGAATTATAAAAATTAGAAAATGAGACTATGGAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAAATATATGAATTATAAAAATTAGAAAATGAGACTATGGAGCAA  350

seq1  AGATGACACACCCATACACAAAGGAGTCATGAGAGAATTCCTATTAGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACACACCCATACACAAAGGAGTCATGAGAGAATTCCTATTAGCCT  400

seq1  TCAGTACGGGGAATACTTTTAGGTAGTCAAAGACTCAGGTAGCCTCCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACGGGGAATACTTTTAGGTAGTCAAAGACTCAGGTAGCCTCCCAA  450

seq1  TAAATTCATATGATTTTAAAGTAGGATGAAAACTCTTCCTAGATAGCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCATATGATTTTAAAGTAGGATGAAAACTCTTCCTAGATAGCCTA  500

seq1  AAGGGAAAAGGTTGCTAATAAAAATATGCTTTTCAAATTTTGAAATGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAAAGGTTGCTAATAAAAATATGCTTTTCAAATTTTGAAATGAAA  550

seq1  TAACACATTGGTATGAAATGTACTGAAGAGTCAGTTTCTTAATTCTGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACATTGGTATGAAATGTACTGAAGAGTCAGTTTCTTAATTCTGACA  600

seq1  GGTAAGCTGAAACTTCACTTTTTTTTTCTTTTCTTTTCTTTTTTTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGCTGAAACTTCACTTTTTTTTTCTTTTCTTTTCTTTTTTTTTTTT  650

seq1  TTTTGCTGTTTTTTGCTCAAACTGTCATAGAGCTTGCAATATAGCCAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTGTTTTTTGCTCAAACTGTCATAGAGCTTGCAATATAGCCAACA  700

seq1  TTGACCTGAGACCCCCATCAGTTCTCCTGCCTGAACATCTCTAATGCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTGAGACCCCCATCAGTTCTCCTGCCTGAACATCTCTAATGCTGG  750

seq1  AATTACAAGCATGAATGCCTGGTTGAAAATCTACTTTTTAAAGTTAAAAA  800
      ||||||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  AATTACAAGCATGAATGCCTGGTTGAAAATCTACTTTTT-AAGTTAAAA-  798

seq1  TAAATAAGTACTAAGAATGAATGAAAAAAAAAAAACTAAAGTAAGAATTT  850
        |||||||||| |||||||||||||||||||||||| |||||  | |||
seq2  -TAATAAGTACT-AGAATGAATGAAAAAAAAAAAACT-AAGTAGAATTTT  845

seq1  TATTG-CCACAATGAT-CTAC-TACCTTCAATAAATGTCCACGTGAAATA  897
      ||||| ||||| |||| |||| ||||||||||||||||||||||||||||
seq2  TATTGCCCACATTGATCCTACTTACCTTCAATAAATGTCCACGTGAAATA  895

seq1  GTAG--AGAATAAGTAAAAACATA-GATTATAG-CACACACAATAGC  940
      ||||   |||||||| ||||| || |||||||| | ||| |||||||
seq2  GTAGGAGGAATAAGTTAAAACCTAGGATTATAGCCCCACCCAATAGC  942


seq1: chr8_31412968_31413665
seq2: B6Ng01-195N05.g_62_761 (reverse)

seq1  CTCTGGTTTATCTACAAAATGGAGAAAAT-AAAAACTTGTATTTTGAAGT  49
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTCTGGTTTATCTACAAAATGGAGAAAATAAAAAACTTGTATTTTGAAGT  50

seq1  ATCTTATTCTAACCCACCC-TTATTATGCAATATTTGAAAGTATACAAAA  98
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATCTTATTCTAACCCACCCTTTATTATGCAATATTTGAAAGTATACAAAA  100

seq1  TATCTTTCTTATTCTGATCCATATGTAATATTGTCTAGGTATATAAATTG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTCTTATTCTGATCCATATGTAATATTGTCTAGGTATATAAATTG  150

seq1  ACATACATGTCACTTTTCAAAAAATAAGAGGAACAGGCTAAAGGAATAGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATGTCACTTTTCAAAAAATAAGAGGAACAGGCTAAAGGAATAGT  200

seq1  TCAGCTTATAAAACATGGCCGGGTGAGGTGGCACACGCCTTTAATCCCAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTATAAAACATGGCCGGGTGAGGTGGCACACGCCTTTAATCCCAG  250

seq1  CACTTGAGAGGCAGAGGCAAGTGGCTCTCTGAGTTCGAGGCCAGCCTGTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGAGAGGCAGAGGCAAGTGGCTCTCTGAGTTCGAGGCCAGCCTGTT  300

seq1  CTACAAAGTGAGTTCCAGGACAGCCAAGGCTACACAGAGAAACCCTGTCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAGTGAGTTCCAGGACAGCCAAGGCTACACAGAGAAACCCTGTCT  350

seq1  CGAAAATCCAAATAATAATAATAATAATAATAATAATAATAATAATAATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAATCCAAATAATAATAATAATAATAATAATAATAATAATAATAATA  400

seq1  ATAATAGTAATAATTTTTTTAAAAAAGCACATGTCCTGCAAGAAAAAGGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGTAATAATTTTTTTAAAAAAGCACATGTCCTGCAAGAAAAAGGA  450

seq1  CCTTATTGTAATCCCCATTATGTCCCCATAAAATTCTTAAGATATTGACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTGTAATCCCCATTATGTCCCCATAAAATTCTTAAGATATTGACT  500

seq1  GATGGGATGGTTGAGCTAATAAAGGCCCTATGATCAGAGTTCTCAGAACC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGATGGTTGAGCTAATAAAGGCCCTATGATCAGAGTTCTCAGAACC  550

seq1  AACATGGTGGAAGGAAAGAACCATCCCTGTATGTTAACCACTGACTACCG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGTGGAAGGAAAGAACCATCCCTGTATGTTAACCACTGACTACCG  600

seq1  CATGTATACAATGGTACATGCATACTAACACACACTAAACAAACCAACAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATACAATGGTACATGCATACTAACACACACTAAACAAACCAACAA  650

seq1  ATAAACAGAAATGCTTTAAACACAGGTGCTAGTTATGATGGAGTGAATTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAGAAATGCTTTAAACACAGGTGCTAGTTATGATGGAGTGAATTC  700


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