BAC Information

Click to search

BAC

Clone NameB6Ng01-198D15
Chromosome8 (Build37)
Map Location 95,771,167 - 95,772,284
singlet/doubletsinglet
Overlap genenone
Upstream gene4933436C20Rik, Irx5, Irx6, LOC100041325, Mmp2, Aytl1, Capns2, LOC100040752, Slc6a2, EG244595, LOC382044, Es1, LOC676523, Ces3, Es22
Downstream geneAU018778, Ces1, 2310039D24Rik, Ces7, Gnao1, Amfr, Nudt21, Ogfod1, Bbs2, Mt4, Mt3, Mt2, Mt1, Nup93, LOC100041555
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198D15.bB6Ng01-198D15.g
ACCGA019878GA019879
length1,1461,145
definitionB6Ng01-198D15.b B6Ng01-198D15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattccctaagtccctcccatgaggacattagtcacgattggattgat
gcccacatccatggctttgttttactgttctaatctttaatggacttctg
tctaaacatagtcacagactaaggtttgaggtaggtggtagagctttaac
atatgaattgccaggtatacacatatcaacttttgaatttcccctgaagc
agacttgagatgaacattcaagttgagggggagtatgaaatcaggtttgg
gtagagaaaggagaaagggccagagggccagaaggataaatggaaatcta
cagctgcctggcattgggtgtcagagtgggagggataatctctaggaagt
cccagagaactaggattggggaggatcccaggagtaaacacaagttggct
tagcccacacacccaacagtggggatatggaacctgaagaggccatctcc
tgtagcttggcagggacccccagtgtagggatgcaaataccaacccatca
acaacactttcaacccaaaatttgtcctgtttaaaagaaatacagggaca
aagatggagcagagactcaaggaatggctgaccaataaccagcccaactt
gagatccatatcatgggcaagtactaacagtattaatgatattctgtaat
gtttgcagacaggtgctgagcataactgtccttttgagaggctctaccca
gcagctgactgaaacagatggagagacccacagccaaacagtggagggag
tttggtgaaggattgaaggccctgaagggggtaggaactctacagaaaga
tcaaaagagccaactaacctggacccttggggagctcttagagaatgggc
ccaccaaccaaagtgcataaacaggctagatacaaggctatcagacaata
tgtagcagattgtgcaggccagtctccatgtgagtcatccaaaactggga
gtggtggctttcccaaaagcttgttgccctgactgtggaatctatcctcc
aacaaggggctgtcctttggtcttggcttcagtgggaaaccatgtaactt
atacttgcaagagactctgatgcaccaaggtgggggattaccagggatag
tcctactcctctcggaacataaatggggaggcgagcatgaagaggt
gaattcagtgcactctgcaactctgaacaaagcataggtattactgtgta
tgctgagctagggatagcagacatggtgctctctacagagaaatgagata
cagcttggcagttgtcactgaacactcatgtgattatccctatttgaggg
atcatgggctgacaaggaaagaaatggtccctgtctcccattctctcaca
ggcagacccaggacttcagcctggaccctgtggctctaagacctatttcc
agagctggaacattttcaggatagagtccctgtttctcctgccccttggg
ttctctactactttcagggagggactgagtcaaggtcatctcagagtgaa
gatgcaggtcaggggctattgggatgtagaagaatgtgtgatgtgattct
acaaacaagatggcaacgtccttgaagaaaggccatgtgggaatggtttc
tgttcctccgttccctgattctcgtttgattgagtctaaggacactgatt
tcataaaagatggatgaagaaatcagaggttgaatgaatgaacctttgtc
cttatttccttttcctaatgttagaaatcatgtgtagggacctaaatagt
caaaaattcaaaatttctttctatataccttgaattcatgctagatgggt
agaatgttgacactcaaggtcatagaatccagggattatatactatacta
tactatactatactatactatactatactatactatactatactatactt
ccaagcagcccctttcttgatccatgacctatataaataaagcttgctct
atcttgggccccttcattttatgtgggaaatacttaacttcatcagtaag
tgccaaaggcaattactgatagaaatgacctacattaaaattaaggaata
ttgacaggaggcaaaagaaagtgctacttgagatttacctcatgctcctc
ccgcctcacctttatcatatttcagcagtgcttatcacagggtactacaa
agaagaaaggagacacaccttggctgccatggcctagcctatattcaaaa
attgcaacaattttcaaagatcaaaaagaagtcagcctacctgtcctatt
ttaactctaatgtcctaagcttttccaagttcagagcctgtagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_95771167_95772284
seq2: B6Ng01-198D15.g_66_1210

seq1  GAATTCAGTGCACTCTGCAACTCTGAACAAAGCATAGGTATTACTGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGCACTCTGCAACTCTGAACAAAGCATAGGTATTACTGTGTA  50

seq1  TGCTGAGCTAGGGATAGCAGACATGGTGCTCTCTACAGAGAAATGAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGCTAGGGATAGCAGACATGGTGCTCTCTACAGAGAAATGAGATA  100

seq1  CAGCTTGGCAGTTGTCACTGAACACTCATGTGATTATCCCTATTTGAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGGCAGTTGTCACTGAACACTCATGTGATTATCCCTATTTGAGGG  150

seq1  ATCATGGGCTGACAAGGAAAGAAATGGTCCCTGTCTCCCATTCTCTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGGCTGACAAGGAAAGAAATGGTCCCTGTCTCCCATTCTCTCACA  200

seq1  GGCAGACCCAGGACTTCAGCCTGGACCCTGTGGCTCTAAGACCTATTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACCCAGGACTTCAGCCTGGACCCTGTGGCTCTAAGACCTATTTCC  250

seq1  AGAGCTGGAACATTTTCAGGATAGAGTCCCTGTTTCTCCTGCCCCTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGGAACATTTTCAGGATAGAGTCCCTGTTTCTCCTGCCCCTTGGG  300

seq1  TTCTCTACTACTTTCAGGGAGGGACTGAGTCAAGGTCATCTCAGAGTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTACTACTTTCAGGGAGGGACTGAGTCAAGGTCATCTCAGAGTGAA  350

seq1  GATGCAGGTCAGGGGCTATTGGGATGTAGAAGAATGTGTGATGTGATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGGTCAGGGGCTATTGGGATGTAGAAGAATGTGTGATGTGATTCT  400

seq1  ACAAACAAGATGGCAACGTCCTTGAAGAAAGGCCATGTGGGAATGGTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAGATGGCAACGTCCTTGAAGAAAGGCCATGTGGGAATGGTTTC  450

seq1  TGTTCCTCCGTTCCCTGATTCTCGTTTGATTGAGTCTAAGGACACTGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTCCGTTCCCTGATTCTCGTTTGATTGAGTCTAAGGACACTGATT  500

seq1  TCATAAAAGATGGATGAAGAAATCAGAGGTTGAATGAATGAACCTTTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAAGATGGATGAAGAAATCAGAGGTTGAATGAATGAACCTTTGTC  550

seq1  CTTATTTCCTTTTCCTAATGTTAGAAATCATGTGTAGGGACCTAAATAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTCCTTTTCCTAATGTTAGAAATCATGTGTAGGGACCTAAATAGT  600

seq1  CAAAAATTCAAAATTTCTTTCTATATACCTTGAATTCATGCTAGATGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATTCAAAATTTCTTTCTATATACCTTGAATTCATGCTAGATGGGT  650

seq1  AGAATGTTGACACTCAAGGTCATAGAATCCAGGGATTATATACTATACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTTGACACTCAAGGTCATAGAATCCAGGGATTATATACTATACTA  700

seq1  TACTATACTATACTATACTATACTATACTATACTATACTATACTATACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATACTATACTATACTATACTATACTATACTATACTATACTATACTT  750

seq1  CCAAGCAGCCCC-TTCTTGATCCATGACCTATATAAATAAAGCTTGCTCT  799
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCAAGCAGCCCCTTTCTTGATCCATGACCTATATAAATAAAGCTTGCTCT  800

seq1  ATCTTGGG-CCCTTCA-TTTATGTGGGAAATAC-TAAC-TCATCAGTAAG  845
      |||||||| ||||||| |||||||||||||||| |||| |||||||||||
seq2  ATCTTGGGCCCCTTCATTTTATGTGGGAAATACTTAACTTCATCAGTAAG  850

seq1  TGCCAAAGGCAATTACTGATAGAAATGACCTACAATAAAATTAAAGAATA  895
      |||||||||||||||||||||||||||||||||| ||||||||| |||||
seq2  TGCCAAAGGCAATTACTGATAGAAATGACCTACATTAAAATTAAGGAATA  900

seq1  TTGACAGGAGGCAAAAGAAAGTGCTAC-TGAGA-TTACCTCATGCTCCTC  943
      ||||||||||||||||||||||||||| ||||| ||||||||||||||||
seq2  TTGACAGGAGGCAAAAGAAAGTGCTACTTGAGATTTACCTCATGCTCCTC  950

seq1  CCGCCTCACCTTTATCATATTTCAGCAGGTGC-TATCACA-GGTACTACA  991
      ||||||||||||||||||||||||||| |||| ||||||| |||||||||
seq2  CCGCCTCACCTTTATCATATTTCAGCA-GTGCTTATCACAGGGTACTACA  999

seq1  AAG-AGAAAGGAGACACAC--TGGCTGCCAT-GCCTAGCCTATA-TCAAA  1036
      ||| |||||||||||||||  |||||||||| |||||||||||| |||||
seq2  AAGAAGAAAGGAGACACACCTTGGCTGCCATGGCCTAGCCTATATTCAAA  1049

seq1  A--TGC-ACAA-TTTCAAAGATCAAAA--GAGTCAGGCTA-CTGCCCTAT  1079
      |  ||| |||| |||||||||||||||   |||||| ||| ||| |||||
seq2  AATTGCAACAATTTTCAAAGATCAAAAAGAAGTCAGCCTACCTGTCCTAT  1099

seq1  TT--ACTCT-ATGTCCT-AGCTTTCCCA--GTCAGAG-CTGTAGTT  1118
      ||  ||||| ||||||| |||||| |||   |||||| ||||||||
seq2  TTTAACTCTAATGTCCTAAGCTTTTCCAAGTTCAGAGCCTGTAGTT  1145