BAC Information

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BAC

Clone NameB6Ng01-202I11
Chromosome8 (Build37)
Map Location 103,688,749 - 103,689,809
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042078, LOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202I11.bB6Ng01-202I11.g
ACCGA022999GA023000
length1,2341,062
definitionB6Ng01-202I11.b B6Ng01-202I11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaaggtggacttcagaaaatcgaataaccccattaaaaaatg
gggctcagaactgaacaaagaattctcacctgaggaataccgaatggcag
agaagcacctgaaaaaatgttcaacatccttaatcatcagggaaatgaaa
atcaaaacaaccttgagattccacctcacaccagtcagaatggctaatat
caaaaattcaggtgacagcagatgctggcaaggatgtggagaaagaggaa
cactcctccatttttggtgggattgcaggcttgtacagccactctggaaa
tcagtcaggcggttcctcagaaaattgaacatagtactaccggaggatcc
agcaatacctctcctgggcatatatccagaagatgccccacctggtaaga
aggacacatgctccactatgttcatagcagccttatttataatagccaga
agctggaaagaacccagatgcccctcaacagaggaatggatacagaaaat
atggtacatctacacaatggagtactactcagctattaaaaagaatgaat
ttatgaaattcctagccaaatggatggacctagagggcatcatcctgagt
gaggtaacacattcacaaaggaattcacacaatatgtactcactgataag
tggatattagccccaaacctaggatacagaagatataagatacaatttgc
taaacacatgaaactcaagaagaatgaagactgaagtgtggacactatgc
ccctccttagaagtggaacaaaacacccatggaaggagatacaaagacaa
agtttggagctgagatgaaaggatggaccatgtagagactgccatatcca
gggatccaccccataatcagcatccaaacgctgacaccattgctacccct
agcccattttatcgaaaggacccagatgtagctgtctcttgtgagactat
gccggggcctagcaaacacagaagtggatgctcacagccagctattggat
ggatcacaggctcccaatggagagctagagaaagtatccaagagctaaag
ggatcttgcaaccctataggtggaacacattatgactaaccagtaccccg
ggagcctctttgactctagcctgcatatgtatcaaagaatgtctagtcgc
catccatggaaggaaaggtccatgaaccgcacctttatgtcccagtcaga
ggaacgccaggcctaaaagggaagtgtgtcttgc
gaattcaaatttcttactgaaaacacttttaccttagatatcattaccaa
tggcattgtctgtaaagtcagaagaccaatctggaagagataaaaattct
ataaacacccatttatgtgaaattccggagattttacattaatgaaaata
tggattagaaggaaataacctctaacttataggaaatatggtcttgcatc
aagagaatgaaaaatagattaccaaggagttttgtaatcttaaattttga
tggcaggttttgaagaaagcagccaacataaattagggtattaaagcaaa
aagcctcgaatatgagttggaacataaaggggggcattgcttcctgtcaa
aacaaaacaaaacaaaacaaataaaaagaagaataagcagtaaaggaaca
acacatcgatgcaagcttcttagaatattatttacttaggaaatctcatg
aaaacagtgtcaatcaaacatgaggctcccttttgtttatgatcatacat
ttgaaatctaacaaaaacaaattaaccagacttggaaaaaaaaagatgca
cacacgtttgatccatgggaatattaaggtataggagtatttaatcaggt
ttttctccagacatcacttgggtcttactatataagaataccagtagttc
agctgcctctggaatgaacagtacccagggcaacagatttgtgactacag
ctcgatgattcagagaattatgccattacctcactgatatgcttagagga
aacttccttagagtaattgatctgtagagtccttgtcattgttctaagaa
tatgacatctgatgtctagcaatctgaaaagttctttactggaagtcaga
tacaaaagatcacctcaggcaattctgtgcatacatgatattgagcaaat
tgtcatgtgttctctactctttgtttgactcaggcactaggataatcatt
ttgactcaataaaaagtgctagtattaatcctcagaaaacccaatgttta
aaattgatcacgtggttacttttgtaaggtctaataaatatacatcacat
aaactctattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103688749_103689809
seq2: B6Ng01-202I11.g_66_1127 (reverse)

seq1  TCAATAGAGTTTATGTTGATGTATATTTTAATTAGAACTTACAAAAGT-A  49
      ||||||||||||||| ||||||||||||  |||||| ||||||||||| |
seq2  TCAATAGAGTTTATG-TGATGTATATTT--ATTAGACCTTACAAAAGTAA  47

seq1  CCACGTGATCAATTTTAAACA-TGGGTTTTCTGAGGATTAATACTAGCAC  98
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCACGTGATCAATTTTAAACATTGGGTTTTCTGAGGATTAATACTAGCAC  97

seq1  TTTTTATTGAGTC-AAATGATTATCCTAGTGCCTGAGTCAAACAAAGAGT  147
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTGAGTCAAAATGATTATCCTAGTGCCTGAGTCAAACAAAGAGT  147

seq1  AGAGAACACATGACAA-TTGCTCAATATCATGTATGCACAGAATTGCCTG  196
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGAGAACACATGACAATTTGCTCAATATCATGTATGCACAGAATTGCCTG  197

seq1  AGGTGATCTTTTGTATCTGACTTCCAGTAAAGAACTTTTCAGATTGCTAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATCTTTTGTATCTGACTTCCAGTAAAGAACTTTTCAGATTGCTAG  247

seq1  ACATCAGATGTCATATTCTTAGAACAATGACAAGGACTCTACAGATCAAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGATGTCATATTCTTAGAACAATGACAAGGACTCTACAGATCAAT  297

seq1  TACTCTAAGGAAGTTTCCTCTAAGCATATCAGTGAGGTAATGGCATAATT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTAAGGAAGTTTCCTCTAAGCATATCAGTGAGGTAATGGCATAATT  347

seq1  CTCTGAATCATCGAGCTGTAGTCACAAATCTGTTGCCCTGGGTACTGTTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAATCATCGAGCTGTAGTCACAAATCTGTTGCCCTGGGTACTGTTC  397

seq1  ATTCCAGAGGCAGCTGAACTACTGGTATTCTTATATAGTAAGACCCAAGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGAGGCAGCTGAACTACTGGTATTCTTATATAGTAAGACCCAAGT  447

seq1  GATGTCTGGAGAAAAACCTGATTAAATACTCCTATACCTTAATATTCCCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTGGAGAAAAACCTGATTAAATACTCCTATACCTTAATATTCCCA  497

seq1  TGGATCAAACGTGTGTGCATCTTTTTTTTTCCAAGTCTGGTTAATTTGTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCAAACGTGTGTGCATCTTTTTTTTTCCAAGTCTGGTTAATTTGTT  547

seq1  TTTGTTAGATTTCAAATGTATGATCATAAACAAAAGGGAGCCTCATGTTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAGATTTCAAATGTATGATCATAAACAAAAGGGAGCCTCATGTTT  597

seq1  GATTGACACTGTTTTCATGAGATTTCCTAAGTAAATAATATTCTAAGAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGACACTGTTTTCATGAGATTTCCTAAGTAAATAATATTCTAAGAAG  647

seq1  CTTGCATCGATGTGTTGTTCCTTTACTGCTTATTCTTCTTTTTATTTGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATCGATGTGTTGTTCCTTTACTGCTTATTCTTCTTTTTATTTGTT  697

seq1  TTGTTTTGTTTTGTTTTGACAGGAAGCAATGCCCCCCTTTATGTTCCAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTTTGTTTTGACAGGAAGCAATGCCCCCCTTTATGTTCCAAC  747

seq1  TCATATTCGAGGCTTTTTGCTTTAATACCCTAATTTATGTTGGCTGCTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTCGAGGCTTTTTGCTTTAATACCCTAATTTATGTTGGCTGCTTT  797

seq1  CTTCAAAACCTGCCATCAAAATTTAAGATTACAAAACTCCTTGGTAATCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAACCTGCCATCAAAATTTAAGATTACAAAACTCCTTGGTAATCT  847

seq1  ATTTTTCATTCTCTTGATGCAAGACCATATTTCCTATAAGTTAGAGGTTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCATTCTCTTGATGCAAGACCATATTTCCTATAAGTTAGAGGTTA  897

seq1  TTTCCTTCTAATCCATATTTTCATTAATGTAAAATCTCCGGAATTTCACA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCTAATCCATATTTTCATTAATGTAAAATCTCCGGAATTTCACA  947

seq1  TAAATGGGTGTTTATAGAATTTTTATCTCTTCCAGATTGGTCTTCTGACT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGGTGTTTATAGAATTTTTATCTCTTCCAGATTGGTCTTCTGACT  997

seq1  TTACAGACAATGCCATTGGTAATGATATCTAAGGTAAAAGTGTTTTCAGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGACAATGCCATTGGTAATGATATCTAAGGTAAAAGTGTTTTCAGT  1047

seq1  AAGAAATTTGAATTC  1061
      |||||||||||||||
seq2  AAGAAATTTGAATTC  1062