BAC Information

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BAC

Clone NameB6Ng01-202L04
Chromosome8 (Build37)
Map Location 70,897,568 - 71,060,651
singlet/doubletdoublet
Overlap gene4732435N03Rik
Upstream geneNat1, Nat2, LOC100041265, Nat3, Psd3, Sh2d4a, LOC665510
Downstream geneInts10, Lpl, LOC100041138, Slc18a1, Atp6v1b2, Lzts1, EG665540, D10627, LOC665553, D130040H23Rik, LOC665561, LOC670593, EG665578
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202L04.bB6Ng01-202L04.g
ACCGA023124GA023125
length1,1451,138
definitionB6Ng01-202L04.b B6Ng01-202L04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,059,499 - 71,060,651)(70,897,568 - 70,898,691)
sequence
gaattcttagtggctatgtctaaaactcctgttttttcttcacttcctcg
gaccctagtcatgtgtcttctaatcacttatactcatttatacagctttt
ctttctttcctcttagtgcttctgactaaaccttttatttgccatctgtt
ttcctagagtagcccccctcttgctaaaccatctatttttcttgtatttg
ttatagttccctttgatttttttaaaacatagatgattagtatgtggtaa
aaaattccatctttattttgttcaagaatagtaattacagcacgtgattt
tgatcattgcaacattcaagccacctgtgatactctgtgttacttccctt
ctctcttggttttggccatttgcttccgtttctagctatgatttatagta
atttttaatcggatattctatattttatctaagacactgtagaggactag
agaggcacagctgaaaagctcactggtgatctgaatctcattcccagcac
ccacatggtagctcacaaccatctgtgactccagtcaagggggacatgat
gtcttcttttggccactgtactggcatcacattcacatggtacacacaca
cacacacacacacacacacacacacacacacacgtctaggcaaagaactc
atccatatacattaaaaagcaagaaaagggggctggagagatggctcagc
cattaaaggctcacaaccaaaaaaaaaaaaacaaggaaagaaaaaagtca
gaaataaggatagcgtgcctgcatactggtgtcgccctcaggaaaggatt
tcagtgttccccgtggaaagacagaaaatacagctcttcattaagatcca
tacattccgttatttcaaagatcagtgcaggaacttgagtttggtctggg
tttgtttacttgacccctaaggcacagcgcatggaaaccgtacttaaaat
cacgtgttaccgggtccttttgttctgtcgtagaccgtaaaattcaactc
cacagtgagtaagaataggcataaattctgcttaggttttgatgtgaaca
atgactttctgctcgcagcccgctcttcccctcctcacacaaacaaactt
gacaactaccaggcttagcctttatcagcactgtacggatagctg
gaattctccattcagttggatgaaggtgaagtttctgaaattggcagctc
taggaggtggggaagcaaaaggtcaaggattgactcattggtacagtttc
caggaagacagagtccccgaagaagtgcacagctggggccatcccactct
gaacattctattaccccgaggggagtgtgcccactgagcaaggacagagt
agccagactgaatagacaccaccagggttcaaaggacagaaaacacctag
caaagatgttttgtggcagtcttgctgtccagtccaggctggctttgatt
ttttaatcttccttcctcaggggacaatacaggtatatgctacaatgccc
agtttctactgaaattagctttttaaagttaatgatgtgtacatgtgtgt
acagttgctcacggattctagaagaaggtgttagatccctggagctggag
ttacaagtagttgtgagccacccggcatgtggctgggaaccaagtttggg
tcctctacaaaaagagtatgttctcttagccactgagctatctctcctgt
ccctaacgaaatttcaacttggatttatttcttctatttctgctgcttct
tctatactgcgactgctattgttatcataaatggacatttgtcgtgatgg
catttgcaattggtaaaggagaaacaaaagccagagacatcttcatgaat
cctgggccactcaaataatcctagtacataaagctcactctcggtagaat
cccagcttcccagcatcttcttatctgaactcgtgctaccaggagccaag
taacctgttcttcatgtgtgttgccccagacagctgagatttatcttcct
ccctctctcctccctccctttctccctttcatttttcctttcttcctcct
tctctctctcccttccttcctcccttcgtttttcctccctcccctccttc
cttccttccttccttccttacaataattccatgcgttccttgcgtgcgga
gcgtagatacagcagctatccatggtaggaaaagaggaccaccctgcagt
ataaaaaggcactggtatgtatctgaacctggcagtattacagatttggc
tttgggtagaaggaataaaactcatttccctcactctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_71059499_71060651
seq2: B6Ng01-202L04.b_45_1189 (reverse)

seq1  CAGCTATCGGTTACAGTGGCTGATAAA-GCTAAGGCTGGTAGTTGTCAAA  49
      |||||||| | |||||| ||||||||| |||||| |||||||||||| ||
seq2  CAGCTATCCG-TACAGT-GCTGATAAAGGCTAAGCCTGGTAGTTGTC-AA  47

seq1  GTGTGTGTGTGGTGGGGGAGGGGGGAGGGAGCGGGGGCTGCGAGCAGAAA  99
      || ||| |||     | |||| ||  || || | ||||||||||||||||
seq2  GTTTGTTTGT-----GTGAGGAGG--GGAAGAGCGGGCTGCGAGCAGAAA  90

seq1  GTCATTGTCAACATCCAAAAACCTAAGCAGAATTTATGCCTA-TCTTACT  148
      ||||||||  |||||  ||||||||||||||||||||||||| |||||||
seq2  GTCATTGTTCACATC--AAAACCTAAGCAGAATTTATGCCTATTCTTACT  138

seq1  CACTGTGGAGTTGAATTTTACGGTCTACGACAGA--CAAAGGACCCGGTA  196
      ||||||||||||||||||||||||||||||||||   |||||||||||| 
seq2  CACTGTGGAGTTGAATTTTACGGTCTACGACAGAACAAAAGGACCCGGT-  187

seq1  AACACGTGATTTTAAGTACGGTTTCCATGCGCTGTGCCTTAGGGGTCAAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACGTGATTTTAAGTACGGTTTCCATGCGCTGTGCCTTAGGGGTCAAG  237

seq1  TAAACAAACCCAGACCAAACTCAAGTTCCTGCACTGATCTTTGAAATAAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAACCCAGACCAAACTCAAGTTCCTGCACTGATCTTTGAAATAAC  287

seq1  GGAATGTATGGATCTTAATGAAGAGCTGTATTTTCTGTC-TTCCACGGGG  345
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGAATGTATGGATCTTAATGAAGAGCTGTATTTTCTGTCTTTCCACGGGG  337

seq1  AACACTGAAATCCTTTCCTGAGGGCGACACCAGTATGCAGGCACGCTATC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGAAATCCTTTCCTGAGGGCGACACCAGTATGCAGGCACGCTATC  387

seq1  CTTATTTCTGACTTTTTTCTTTCCTTGTTTTTTTTTTTTTGGTTGTGAGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTCTGACTTTTTTCTTTCCTTGTTTTTTTTTTTTTGGTTGTGAGC  437

seq1  CTTTAATGGCTGAGCCATCTCTCCAGCCCCCTTTTCTTGCTTTTTAATGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATGGCTGAGCCATCTCTCCAGCCCCCTTTTCTTGCTTTTTAATGT  487

seq1  ATATGGATGAGTTCTTTGCCTAGACGTGTGTGTGTGTGTGTGTGTGTGTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGATGAGTTCTTTGCCTAGACGTGTGTGTGTGTGTGTGTGTGTGTG  537

seq1  TGTGTGTGTGTGTGTGTACCATGTGAATGTGATGCCAGTACAGTGGCCAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTACCATGTGAATGTGATGCCAGTACAGTGGCCAA  587

seq1  AAGAAGACATCATGTCCCCCTTGACTGGAGTCACAGATGGTTGTGAGCTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACATCATGTCCCCCTTGACTGGAGTCACAGATGGTTGTGAGCTA  637

seq1  CCATGTGGGTGCTGGGAATGAGATTCAGATCACCAGTGAGCTTTTCAGCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGGGTGCTGGGAATGAGATTCAGATCACCAGTGAGCTTTTCAGCT  687

seq1  GTGCCTCTCTAGTCCTCTACAGTGTCTTAGATAAAATATAGAATATCCGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTCTCTAGTCCTCTACAGTGTCTTAGATAAAATATAGAATATCCGA  737

seq1  TTAAAAATTACTATAAATCATAGCTAGAAACGGAAGCAAATGGCCAAAAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATTACTATAAATCATAGCTAGAAACGGAAGCAAATGGCCAAAAC  787

seq1  CAAGAGAGAAGGGAAGTAACACAGAGTATCACAGGTGGCTTGAATGTTGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAGAAGGGAAGTAACACAGAGTATCACAGGTGGCTTGAATGTTGC  837

seq1  AATGATCAAAATCACGTGCTGTAATTACTATTCTTGAACAAAATAAAGAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCAAAATCACGTGCTGTAATTACTATTCTTGAACAAAATAAAGAT  887

seq1  GGAATTTTTTACCACATACTAATCATCTATGTTTTAAAAAAATCAAAGGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTTTTACCACATACTAATCATCTATGTTTTAAAAAAATCAAAGGG  937

seq1  AACTATAACAAATACAAGAAAAATAGATGGTTTAGCAAGAGGGGGGCTAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAACAAATACAAGAAAAATAGATGGTTTAGCAAGAGGGGGGCTAC  987

seq1  TCTAGGAAAACAGATGGCAAATAAAAGGTTTAGTCAGAAGCACTAAGAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAAAACAGATGGCAAATAAAAGGTTTAGTCAGAAGCACTAAGAGG  1037

seq1  AAAGAAAGAAAAGCTGTATAAATGAGTATAAGTGATTAGAAGACACATGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAAGCTGTATAAATGAGTATAAGTGATTAGAAGACACATGA  1087

seq1  CTAGGGTCCGAGGAAGTGAAGAAAAAACAGGAGTTTTAGACATAGCCACT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTCCGAGGAAGTGAAGAAAAAACAGGAGTTTTAGACATAGCCACT  1137

seq1  AAGAATTC  1153
      ||||||||
seq2  AAGAATTC  1145

seq1: chr8_70897568_70898691
seq2: B6Ng01-202L04.g_68_1205

seq1  GAATTCTCCATTCAGTTGGATGAAGGTGAAGTTTCTGAAATTGGCAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATTCAGTTGGATGAAGGTGAAGTTTCTGAAATTGGCAGCTC  50

seq1  TAGGAGGTGGGGAAGCAAAAGGTCAAGGATTGACTCATTGGTACAGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGTGGGGAAGCAAAAGGTCAAGGATTGACTCATTGGTACAGTTTC  100

seq1  CAGGAAGACAGAGTCCCCGAAGAAGTGCACAGCTGGGGCCATCCCACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGACAGAGTCCCCGAAGAAGTGCACAGCTGGGGCCATCCCACTCT  150

seq1  GAACATTCTATTACCCCGAGGGGAGTGTGCCCACTGAGCAAGGACAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTCTATTACCCCGAGGGGAGTGTGCCCACTGAGCAAGGACAGAGT  200

seq1  AGCCAGACTGAATAGACACCACCAGGGTTCAAAGGACAGAAAACACCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGACTGAATAGACACCACCAGGGTTCAAAGGACAGAAAACACCTAG  250

seq1  CAAAGATGTTTTGTGGCAGTCTTGCTGTCCAGTCCAGGCTGGCTTTGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATGTTTTGTGGCAGTCTTGCTGTCCAGTCCAGGCTGGCTTTGATT  300

seq1  TTTTAATCTTCCTTCCTCAGGGGACAATACAGGTATATGCTACAATGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATCTTCCTTCCTCAGGGGACAATACAGGTATATGCTACAATGCCC  350

seq1  AGTTTCTACTGAAATTAGCTTTTTAAAGTTAATGATGTGTACATGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTACTGAAATTAGCTTTTTAAAGTTAATGATGTGTACATGTGTGT  400

seq1  ACAGTTGCTCACGGATTCTAGAAGAAGGTGTTAGATCCCTGGAGCTGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGCTCACGGATTCTAGAAGAAGGTGTTAGATCCCTGGAGCTGGAG  450

seq1  TTACAAGTAGTTGTGAGCCACCCGGCATGTGGCTGGGAACCAAGTTTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGTAGTTGTGAGCCACCCGGCATGTGGCTGGGAACCAAGTTTGGG  500

seq1  TCCTCTACAAAAAGAGTATGTTCTCTTAGCCACTGAGCTATCTCTCCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTACAAAAAGAGTATGTTCTCTTAGCCACTGAGCTATCTCTCCTGT  550

seq1  CCCTAACGAAATTTCAACTTGGATTTATTTCTTCTATTTCTGCTGCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAACGAAATTTCAACTTGGATTTATTTCTTCTATTTCTGCTGCTTCT  600

seq1  TCTATACTGCGACTGCTATTGTTATCATAAATGGACATTTGTCGTGATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACTGCGACTGCTATTGTTATCATAAATGGACATTTGTCGTGATGG  650

seq1  CATTTGCAATTGGTAAAGGAGAAACAAAAGCCAGAGACATCTTCATGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCAATTGGTAAAGGAGAAACAAAAGCCAGAGACATCTTCATGAAT  700

seq1  CCTGGGCCACTCAAATAATCCTAGTACATAAAGCTCACTCTCGGTAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCCACTCAAATAATCCTAGTACATAAAGCTCACTCTCGGTAGAAT  750

seq1  -CCAGCTTCCCAGCATCTTCTTATCTGAACTCGTGCTACCAGGAGCCAAG  799
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTTCCCAGCATCTTCTTATCTGAACTCGTGCTACCAGGAGCCAAG  800

seq1  TAACCTGTTCTTCATGTGTGTTGCCCCAGACAGCTGAGATTTATCTTCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGTTCTTCATGTGTGTTGCCCCAGACAGCTGAGATTTATCTTCCT  850

seq1  CCCTCTCTCCCTCCCTCCCTTTCTCCCTTTCATTTTTCCTTTCTTCCTCC  899
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCT-CCTCCCTCCCTTTCTCCCTTTCATTTTTCCTTTCTTCCTCC  899

seq1  TTCTCTCTCTCCCTTCCTTCCTCCCTTCGTTTTTCCTCCCTCCCCCTCCT  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTCTCTCTCTCCCTTCCTTCCTCCCTTCGTTTTTCCTCCCT-CCCCTCCT  948

seq1  TCCTTCCTTCCTTCCTTCCTT-CCTTCCTTCC-TTCCTTCCTT-CCTTCC  996
      ||||||||||||||||||||| |  |  |||| | | |||||| | | | 
seq2  TCCTTCCTTCCTTCCTTCCTTACAATAATTCCATGCGTTCCTTGCGTGCG  998

seq1  TAGCTTAGATACAGCAGC-ATCGCATGGTAGG-AAAGAGGACCACCCTGC  1044
       ||| ||||||||||||| ||| ||||||||| |||||||||||||||||
seq2  GAGCGTAGATACAGCAGCTATC-CATGGTAGGAAAAGAGGACCACCCTGC  1047

seq1  AG-ATAGAAA-GCACTG--ATGTATCAG-ACCTGGCAGCATTACAGATTT  1089
      || ||| ||| ||||||  ||||||| | ||||||||| |||||||||||
seq2  AGTATAAAAAGGCACTGGTATGTATCTGAACCTGGCAGTATTACAGATTT  1097

seq1  -GCTTTGTG-AGGAGGA--TAAACTCATT--CCTCACTCTG  1124
       |||||| | || ||||   |||||||||  ||||||||||
seq2  GGCTTTGGGTAGAAGGAATAAAACTCATTTCCCTCACTCTG  1138