BAC Information

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BAC

Clone NameB6Ng01-202L08
Chromosome8 (Build37)
Map Location 55,538,823 - 55,539,850
singlet/doubletsinglet
Overlap genenone
Upstream geneAga, Neil3, LOC100040107, Vegfc
Downstream geneSpcs3, Asb5, Spata4, Wdr17, Gpm6a, LOC667624, LOC100040156, LOC100040382, LOC100040392, EG546212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202L08.bB6Ng01-202L08.g
ACCGA023130GA023131
length1,2111,008
definitionB6Ng01-202L08.b B6Ng01-202L08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaactaaggaaaattgaatgcctgagaagctcctaaaggaatg
ttcaacatccttagtcatcagggaaattcaaatcaaaatgaccctgagat
tccgcaaaactcaggtgacagcagatgctggaaaggttgtggagaaagaa
cactcctccattgctgctgggattgtaagctggtacaaccactctggaag
acagtctggtgtttcatcagaaaactggacatagtattacctaaggaccc
agctataccacttctgggcatatacccagaagatgctccaacatgtcata
aagacacatgctccactatgttcatagcagccatagttatactagccaga
aactgaaaagaatctaggtgtctctcaacagaggaatggatacagaaaat
gtggtacatttacacaacggagtactactcagctattgaagcaatgactt
catgaaactcgcaggcaaatggatggaacttgaaaatatcctgagtgagg
taactcagtcacaaaagaacacaaatggtatgcactcactgatatatgga
tattgacccaaatgttcagaataccaaagatacaattcacagaccatata
aagcccaagaagaaagaccaaagtgtggatgcttcagtgcttcttaggag
gaacaaaagactcaccaggacgaaatatggagacaatgtatggaacagag
actcaaggaaagaccctccagagactgccccacttggggatccatctcag
atatagttaccaaacctggatgctattgtggatgcctggaagtgtttgct
gacgggagcctgatatggctgtctcttggtagactctaccagagctggac
aaatacagaggtggatactctcagccaaccattggactgagcacagggtt
ccgatggaggagttggagaagggactgaaggagctgaggggatttgaagc
cccatgctgggagcaacaagtgtcaactagccagacccctctgagctcct
ggagactggaccaccaaccaaagagtacacatggaggacccagggctctg
ggccgcattatgtggcagaggatagccttgctggtcatcagtggggaaga
agaggtccttgggtcctgaagtggtgtctgattgccccagtgtagggcat
tgcacgacagagacatctggtatggggggggggatatctcccatttgatg
acggcagtggc
gaattcctcatcgaggtacaagggatcaaaactgaaatgggatagaagga
tgaagaacggagaggtcacagcagatgatttttaaactgaagtccaaatg
ccggtaaaaagcacgtgaatgtgatttcattgaataaaaagaaataatct
actattatttttcttctcagtgctatccaatatgtttaaatctctgagat
atgtaacccgaactacaaatctctccagggtccactgcttcctggtcctc
tggggtttcctgtttgaatcaaaaggaaatgtccccacagattgttttaa
gagatgtagtctattatacctacaatattcagacctaagagataaaagaa
gctgaagctgccaaaccatatttccattgtttcagagctggttgcattta
aactaaaggctcacgggatatgtttctcaaccggtcacatattaaaaaca
aaaaatccatatttatgtactttagttatctgttcatttaacacaccaca
gaccaaattccattacaaagcacttgagtcagggtttagaagataaagaa
aagactgtcaagtttcaaacccaggacaaattgctgatgtgcccatttaa
cattttgaagtggacctggcctctgggttctctagcatccattcgtctct
acttgttacagagtatggctggcacatgctgacctctatgctgaactttc
cagcctaggggctgagctgccttccacccagagcctcttccctatatcat
ccagacattttggttacctgtcctttttgtgcctttggctttctggttgc
tacacctggttctttctcctctctccttccactccccatctccccacaaa
gcccagcttagtctggttatgtctattctgaactcttccagatgtctctg
cctttgcctatactctcgctttttatctacagttaaactctcctccacaa
tacctagggagcagtcccttcccctccccccttcccttccccattccctt
tcccttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_55538823_55539850
seq2: B6Ng01-202L08.g_65_1072 (reverse)

seq1  GGAAGGGAAAGGGGGGAGCAGGAAGGGGAAAGGGGAAAGGGGGAAGGGGA  50
                          |||| |||||||||  || |||||| ||||
seq2  --------------------GGAA-GGGAAAGGG--AATGGGGAA-GGGA  26

seq1  AGGGGGGAGGGGAA-GGACTGCT-CCTAGGTATTGTGGAGGAGAGTTT-A  97
      |||||||||||||| |||||||| |||||||||||||||||||||||| |
seq2  AGGGGGGAGGGGAAGGGACTGCTCCCTAGGTATTGTGGAGGAGAGTTTAA  76

seq1  CTGTAGAT-AAAAGCGAGAGTATAGGCAAAGGCAGAGACATCTGGAAGAG  146
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGATAAAAAGCGAGAGTATAGGCAAAGGCAGAGACATCTGGAAGAG  126

seq1  TTCAGAATAGACATAACCAGACTAAGCTGGGCTTTGTGGGGAGATGGGGA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAATAGACATAACCAGACTAAGCTGGGCTTTGTGGGGAGATGGGGA  176

seq1  GTGGAAGGAGAGAGGAGAAAGAACCAGGTGTAGCAACCAGAAAGCCAAAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGGAGAGAGGAGAAAGAACCAGGTGTAGCAACCAGAAAGCCAAAG  226

seq1  GCACAAAAAGGACAGGTAACCAAAATGTCTGGATGATATAGGGAAGAGGC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAAAAGGACAGGTAACCAAAATGTCTGGATGATATAGGGAAGAGGC  276

seq1  TCTGGGTGGAAGGCAGCTCAGCCCCTAGGCTGGAAAGTTCAGCATAGAGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTGGAAGGCAGCTCAGCCCCTAGGCTGGAAAGTTCAGCATAGAGG  326

seq1  TCAGCATGTGCCAGCCATACTCTGTAACAAGTAGAGACGAATGGATGCTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATGTGCCAGCCATACTCTGTAACAAGTAGAGACGAATGGATGCTA  376

seq1  GAGAACCCAGAGGCCAGGTCCACTTCAAAATGTTAAATGGGCACATCAGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCCAGAGGCCAGGTCCACTTCAAAATGTTAAATGGGCACATCAGC  426

seq1  AATTTGTCCTGGGTTTGAAACTTGACAGTCTTTTCTTTATCTTCTAAACC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTCCTGGGTTTGAAACTTGACAGTCTTTTCTTTATCTTCTAAACC  476

seq1  CTGACTCAAGTGCTTTGTAATGGAATTTGGTCTGTGGTGTGTTAAATGAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCAAGTGCTTTGTAATGGAATTTGGTCTGTGGTGTGTTAAATGAA  526

seq1  CAGATAACTAAAGTACATAAATATGGATTTTTTGTTTTTAATATGTGACC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAACTAAAGTACATAAATATGGATTTTTTGTTTTTAATATGTGACC  576

seq1  GGTTGAGAAACATATCCCGTGAGCCTTTAGTTTAAATGCAACCAGCTCTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAGAAACATATCCCGTGAGCCTTTAGTTTAAATGCAACCAGCTCTG  626

seq1  AAACAATGGAAATATGGTTTGGCAGCTTCAGCTTCTTTTATCTCTTAGGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATGGAAATATGGTTTGGCAGCTTCAGCTTCTTTTATCTCTTAGGT  676

seq1  CTGAATATTGTAGGTATAATAGACTACATCTCTTAAAACAATCTGTGGGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATATTGTAGGTATAATAGACTACATCTCTTAAAACAATCTGTGGGG  726

seq1  ACATTTCCTTTTGATTCAAACAGGAAACCCCAGAGGACCAGGAAGCAGTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCTTTTGATTCAAACAGGAAACCCCAGAGGACCAGGAAGCAGTG  776

seq1  GACCCTGGAGAGATTTGTAGTTCGGGTTACATATCTCAGAGATTTAAACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGGAGAGATTTGTAGTTCGGGTTACATATCTCAGAGATTTAAACA  826

seq1  TATTGGATAGCACTGAGAAGAAAAATAATAGTAGATTATTTCTTTTTATT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGATAGCACTGAGAAGAAAAATAATAGTAGATTATTTCTTTTTATT  876

seq1  CAATGAAATCACATTCACGTGCTTTTTACCGGCATTTGGACTTCAGTTTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAATCACATTCACGTGCTTTTTACCGGCATTTGGACTTCAGTTTA  926

seq1  AAAATCATCTGCTGTGACCTCTCCGTTCTTCATCCTTCTATCCCATTTCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATCTGCTGTGACCTCTCCGTTCTTCATCCTTCTATCCCATTTCA  976

seq1  GTTTTGATCCCTTGTACCTCGATGAGGAATTC  1028
      ||||||||||||||||||||||||||||||||
seq2  GTTTTGATCCCTTGTACCTCGATGAGGAATTC  1008