BAC Information

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BAC

Clone NameB6Ng01-205I18
Chromosome8 (Build37)
Map Location 60,557,533 - 60,558,602
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
Downstream gene4930431L04Rik, BC030500
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205I18.bB6Ng01-205I18.g
ACCGA025199GA025200
length1,0301,087
definitionB6Ng01-205I18.b B6Ng01-205I18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattctttgtttagctctgagccccatttttaaatggggttatttgat
tttctggagtccaccttcttgagttctttatatatattggatattagtcc
cctatctgatataggctaggtaaagatcgtttccgaatctgttggtggcc
tttttgtcttatttatgttgtcttttgccttacagaagctttgcaatttt
atgaggtcccatttgtcgattctcgatcttacagcactagccattgctgt
tctattcaggaatttttcccctgtgcccatatcttcgaggcttttcccca
ctttttactctataagtttcagtgtctctggttttatgtggagttccttg
atccacttagatttgaccttagtacaaggagatatgaatggatcaattca
cattcttctacatgataaccgccagttgtgccagcaccatttgttgaaga
tgctgtcttttttccactggatggtttttgctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattacattg
gtctacttttctgaacttataccagtaccatgcagtttttatcacaattg
ctctgtagtagagctttaggtcaggcatggtgattccaccagaagttctt
ttatccttgagaagagtttttgctatcctaggttttttgttattccagat
gaatttgcagattgccctttctaattcgttgaagaattgagttggaattt
tgatagggattgcattgaatctgtagattgcttttggcaagatagccatt
tttactatattgatcctgctattttctaagaaaaaaaaaaaaaagtctgt
accatttttctttaaactcagaacctttccctaagaaaaagaaacagaat
tgtaaattttgggaaacttttaatcattaagcattcggtggggtttaaaa
atctcaactcaaataaaccatttttcagccacatgtatgaagagtatgtt
ttacatcctttacataatctttgcctctaa
gaattcttttttctcaactgtcaatcaatagaatctgattttcaaaagaa
agttacagaacaggggtatgactgtttcaaagactcccagagccttgatg
aacaagactgtttactcttgcaagaacaaagaacaaaccacatgaagttt
cattatttattaggcattaacaattgattgatcctgctcagttatctgcc
attaccctccatgatctatatttggtgatgcttcttttcagagccgggga
aaaggacatccaagggtcctttcactcagaggtgataagccacaaagatt
ggagtgagttgagagctcctgtcaataacatagagtctgttctgtatgaa
catgcttgaggtcactttcattctgttttgactgctgtaaaaaaagacta
gccatgctgattacaattttgcaaaaaacaaacttaatcattgcaaagaa
atcccacatcaatggattacattattgcaatccttgtgttcacagggaaa
catgtatctaaatacacattagtcagaagatatataatttgatattcttt
gatttaacttgaatagtacagattttaagcaatcaaaaagagcgttgtga
taaggttcaaggtctttgaagtacttttctgtcaataaggatgagaaggg
gctgtttaaataaaggacttcataaatatcggactagaaaacagcataga
aaaaacatggagaacaactgagagaaacacaaggaagttgaaatcacttg
cagctccatatacctggggtcaaagagactgggtgtgggggttgatcagt
aggcaaagcatgaaaaatgagcatgctagttcacatcttgaattctagta
ctcctatgacaatgtgggcagtagaaacaagaaacacaagaaggcaggga
agcagctaacctggtctgcacatagggcaaattatgagaccttatattaa
acaaggatgcaggtggaaggactggaagcccagcattgcttcttctgact
tttgaaatatgtgtggtgggttcatgccttcataagctctcctaatccta
tgtagattctcctctctccctcctccctgttcttaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_60557533_60558602
seq2: B6Ng01-205I18.g_66_1152

seq1  GAATTCTTTTTTCTCAACTGTCAATCAATAGAATCTGATTTTCAAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTCTCAACTGTCAATCAATAGAATCTGATTTTCAAAAGAA  50

seq1  AGTTACAGAACAGGGGTATGACTGTTTCAAAGACTCCCAGAGCCTTGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAGAACAGGGGTATGACTGTTTCAAAGACTCCCAGAGCCTTGATG  100

seq1  AACAAGACTGTTTACTCTTGCAAGAACAAAGAACAAACCACATGAAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGACTGTTTACTCTTGCAAGAACAAAGAACAAACCACATGAAGTTT  150

seq1  CATTATTTATTAGGCATTAACAATTGATTGATCCTGCTCAGTTATCTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTATTAGGCATTAACAATTGATTGATCCTGCTCAGTTATCTGCC  200

seq1  ATTACCCTCCATGATCTATATTTGGTGATGCTTCTTTTCAGAGCCGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCCTCCATGATCTATATTTGGTGATGCTTCTTTTCAGAGCCGGGGA  250

seq1  AAAGGACATCCAAGGGTCCTTTCACTCAGAGGTGATAAGCCACAAAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACATCCAAGGGTCCTTTCACTCAGAGGTGATAAGCCACAAAGATT  300

seq1  GGAGTGAGTTGAGAGCTCCTGTCAATAACATAGAGTCTGTTCTGTATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGAGTTGAGAGCTCCTGTCAATAACATAGAGTCTGTTCTGTATGAA  350

seq1  CATGCTTGAGGTCACTTTCATTCTGTTTTGACTGCTGTAAAAAAAGACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTGAGGTCACTTTCATTCTGTTTTGACTGCTGTAAAAAAAGACTA  400

seq1  GCCATGCTGATTACAATTTTGCAAAAAACAAACTTAATCATTGCAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGCTGATTACAATTTTGCAAAAAACAAACTTAATCATTGCAAAGAA  450

seq1  ATCCCACATCAATGGATTACATTATTGCAATCCTTGTGTTCACAGGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCACATCAATGGATTACATTATTGCAATCCTTGTGTTCACAGGGAAA  500

seq1  CATGTATCTAAATACACATTAGTCAGAAGATATATAATTTGATATTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATCTAAATACACATTAGTCAGAAGATATATAATTTGATATTCTTT  550

seq1  GATTTAACTTGAATAGTACAGATTTTAAGCAATCAAAAAGAGCGTTGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAACTTGAATAGTACAGATTTTAAGCAATCAAAAAGAGCGTTGTGA  600

seq1  TAAGGTTCAAGGTCTTTGAAGTACTTTTCTGTCAATAAGGATGAGAAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTCAAGGTCTTTGAAGTACTTTTCTGTCAATAAGGATGAGAAGGG  650

seq1  GCTGTTTAAATAAAGGACTTCATAAATATCGGACTAGAAAACAGCATAG-  699
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCTGTTTAAATAAAGGACTTCATAAATATCGGACTAGAAAACAGCATAGA  700

seq1  AAAAACATGGAGAACAACTGAGAGAAACACAAGGAAGTTGAAATCACTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATGGAGAACAACTGAGAGAAACACAAGGAAGTTGAAATCACTTG  750

seq1  CAGCTCCATATACCTGGGGTCAAAGAGACTGGGTGTGGGGGTTGATCAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCATATACCTGGGGTCAAAGAGACTGGGTGTGGGGGTTGATCAGT  800

seq1  AGGCAAAGCATGAAAAATGAGCATGCTAGTTCACATCTTGAATTCTAGTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAGCATGAAAAATGAGCATGCTAGTTCACATCTTGAATTCTAGTA  850

seq1  CTCCTATGACAATGTGGGCAGTAGAAACAAGAAACACAAGAAGGCAGGG-  898
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTCCTATGACAATGTGGGCAGTAGAAACAAGAAACACAAGAAGGCAGGGA  900

seq1  AGCAGCTAACCTGGTCTGCACATA-GGCAAA-TATGAGACCTTATATTAA  946
      |||||||||||||||||||||||| |||||| ||||||||||||||||||
seq2  AGCAGCTAACCTGGTCTGCACATAGGGCAAATTATGAGACCTTATATTAA  950

seq1  ACAAGGATGCAGGTG--AGGACT-GAGGCCCAGCATTGCT--CTCTGAC-  990
      |||||||||||||||  |||||| || |||||||||||||   |||||| 
seq2  ACAAGGATGCAGGTGGAAGGACTGGAAGCCCAGCATTGCTTCTTCTGACT  1000

seq1  TTTGAAATATGTGTGGT-GGTTCATG-CTTCATA--GTCTCCTATATCTA  1036
      ||||||||||||||||| |||||||| |||||||   |||||||   |||
seq2  TTTGAAATATGTGTGGTGGGTTCATGCCTTCATAAGCTCTCCTAATCCTA  1050

seq1  TGTAGATTCT-CTCTCTCCCT-CTCCCTG-TCTTACA  1070
      |||||||||| |||||||||| ||||||| |||||||
seq2  TGTAGATTCTCCTCTCTCCCTCCTCCCTGTTCTTACA  1087