BAC Information

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BAC

Clone NameB6Ng01-205M05
Chromosome8 (Build37)
Map Location 13,986,373 - 14,061,769
singlet/doubletdoublet
Overlap geneEG546036, Erich1
Upstream geneMcf2l, F7, F10, Proz, Pcid2, Cul4a, Lamp1, Grtp1, Adprhl1, Dcun1d2, Tmco3, Tfdp1, Atp4b, Grk1, Gm687, Gas6, LOC434282, 1700029H14Rik, Rasa3, 4932443I19Rik, LOC665516, Cdc16, Upf3a, AF366264, D8Ertd457e, 2410022L05Rik, EG665536, Fbxo25, LOC100041103, 2610019F03Rik
Downstream geneDlgap2, LOC100041140, C030037F17Rik, Cln8, Arhgef10, 2900016B01Rik, 5830468F06Rik, Kbtbd11, BB014433, Myom2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205M05.bB6Ng01-205M05.g
ACCGA025355GA025356
length8821,110
definitionB6Ng01-205M05.b B6Ng01-205M05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,986,373 - 13,987,252)(14,060,667 - 14,061,769)
sequence
gaattccaggccagccagggccatgcagagaaaccctgtctcgaaacatc
ctgcctccctcacaaaagaagctagctttaaaataagtataaaaatagtt
tatagacatttagattgtttctatccccttattgaaggggtaagaggtag
aaatgcataggtgcacaaagagtcccactagcgacacagatcgggtgact
gcagatagtggcatggcaggaacaacagccacagtcattggaggcaagac
agccctggttttctaaagcagagcaacgtaggcctgcttctagggccctc
cttcctccgtcagctacagtgtatcgtctagggaaagataggtcagaaag
tttacaaggttgaaggaaatgcaattattaccaagactctccagggagat
ctcggaaaggaaaggaggaaggaggaatggggggaaaggagacaaggggg
agaagaagggattctttcaagagtatcaaaacaaattttgacaaaggaaa
aacaacattcaaaagttgtgtctgaggagccatagggtgggggcccctgc
aacctgctgtttcttatctaagcagactgcaggcatctggggtgggggtt
cctgtttggtctctggctttgatgtggtcagatggtctgtaagaatagct
ggtctgtataaacatacaggttctgggagaaggagtgagtattggcttct
gaaggaagaggtctcacagaataagtagtcaaagcccagggtgcctcgct
ggggtcccgtgccccaccacctgatgcttttatttttccttaggagcgtc
tatgcagacataatgtttcttctttatcaataggcagattttgggactgg
gggatgcagctctgcggtcaagggcttgtgta
gaattcagtctattgacattgcaatggcaattaatcagactcagtggtat
ggttaccatgacttcaaatcattaccagaagttacacttttcattgaacg
ttaagtcagagtgtttctactctccattttcttctctgcttcctggctcc
tgggaggtaaatatgtcacctctgttatgtgtgggtgaggagcatgcctg
ccctgaagcaagtcagccaggaaccagggctctgggacaagcctacaaca
gaagagggcatcagatctcattacagatggttgtgagccaccatggttgt
gagccatagtgcagttgctgggacttgaactcaggacctccggaagaaca
gtcagtgctcttaaccgctgagccatctctccaggcccaccccaaacgtt
tttttatctcttttgagagagtcttgccttttcacccaggctggtgtcag
actcacagtctgctctcctcagactctccagtgctaggatccaaggggtg
cactaccatgcccagccctctgccagttctctgatggggtctccacttcc
ctaacctaaatggacctctatcttgacacctagccctatctgcagaggac
ctgccagagactggcctgctgctgtttgcttcccacacaggaccctgctg
gaggcctgtagcctattcatgagtcagcataagctaaaaacatctctctg
gtttctcaggatgtctttgaacagcttggagatagaattcagctggggag
ttgatatctcaactttgaatgcttataacttatacccaaatgttttgatt
tttttctatcaacttatttaaatatgcttttcattatgatttccataaat
aagcatttaatgacatttgaaatgatagggtgggagaaaagtgtaagaat
ccccacttgtttgctcatgtcgaccatgtctgttctccataaaaccagaa
tatttaggagttcctgggcctgcctggcttcgggcaagggtgagtttgag
caagtccttgcactcccaaaaatggattcagcttatagtatggaaatcct
caatgttcatcagtggttgcgctgagccactgtggtagagatgatgaaga
tcctagcccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_13986373_13987252
seq2: B6Ng01-205M05.b_44_925

seq1  GAATTCCAGGCCAGCCAGGGCCATGCAGAGAAACCCTGTCTCGAAACATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCAGCCAGGGCCATGCAGAGAAACCCTGTCTCGAAACATC  50

seq1  CTGCCTCCCTCACAAAAGAAGCTAGCTTTAAAATAAGTATAAAAATAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCTCACAAAAGAAGCTAGCTTTAAAATAAGTATAAAAATAGTT  100

seq1  TATAGACATTTAGATTGTTTCTATCCCCTTATTGAAGGGGTAAGAGGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACATTTAGATTGTTTCTATCCCCTTATTGAAGGGGTAAGAGGTAG  150

seq1  AAATGCATAGGTGCACAAAGAGTCCCACTAGCGACACAGATCGGGTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCATAGGTGCACAAAGAGTCCCACTAGCGACACAGATCGGGTGACT  200

seq1  GCAGATAGTGGCATGGCAGGAACAACAGCCACAGTCATTGGAGGCAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAGTGGCATGGCAGGAACAACAGCCACAGTCATTGGAGGCAAGAC  250

seq1  AGCCCTGGTTTTCTAAAGCAGAGCAACGTAGGCCTGCTTCTAGGGCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGGTTTTCTAAAGCAGAGCAACGTAGGCCTGCTTCTAGGGCCCTC  300

seq1  CTTCCTCCGTCAGCTACAGTGTATCGTCTAGGGAAAGATAGGTCAGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCCGTCAGCTACAGTGTATCGTCTAGGGAAAGATAGGTCAGAAAG  350

seq1  TTTACAAGGTTGAAGGAAATGCAATTATTACCAAGACTCTCCAGGGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAGGTTGAAGGAAATGCAATTATTACCAAGACTCTCCAGGGAGAT  400

seq1  CTCGGAAAGGAAAGGAGGAAGGAGGAATGGGGGGAAAGGAGACAAGGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGAAAGGAAAGGAGGAAGGAGGAATGGGGGGAAAGGAGACAAGGGGG  450

seq1  AGAAGAAGGGATTCTTTCAAGAGTATCAAAACAAATTTTGACAAAGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGGGATTCTTTCAAGAGTATCAAAACAAATTTTGACAAAGGAAA  500

seq1  AACAACATTCAAAAGTTGTGTCTGAGGAGCCATAGGGTGGGGGCCCCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACATTCAAAAGTTGTGTCTGAGGAGCCATAGGGTGGGGGCCCCTGC  550

seq1  AACCTGCTGTTTCTTATCTAAGCAGACTGCAGGCATCTGGGGTGGGGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCTGTTTCTTATCTAAGCAGACTGCAGGCATCTGGGGTGGGGGTT  600

seq1  CCTGTTTGGTCTCTGGCTTTGATGTGGTCAGATGGTCTGTAAGAATAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGGTCTCTGGCTTTGATGTGGTCAGATGGTCTGTAAGAATAGCT  650

seq1  GGTCTGTATAAACATACAGGTTCTGGGAGAAGGAGTGAGTATTGGC-TCT  699
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGTCTGTATAAACATACAGGTTCTGGGAGAAGGAGTGAGTATTGGCTTCT  700

seq1  GAAGGAAGAGGTCTCACAGAATAAGTAGTCAAAGCCCAGGGTGCCTCGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGAGGTCTCACAGAATAAGTAGTCAAAGCCCAGGGTGCCTCGCT  750

seq1  GGGGTCCCGTGCCCCACCACCTGATGCTTTTATTTTTCCTTAGGAGCGTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCCCGTGCCCCACCACCTGATGCTTTTATTTTTCCTTAGGAGCGTC  800

seq1  TATGCAGACATAATGTTTCTTCTTTATCAATAGGCAGATTTTGGGACT-G  848
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATGCAGACATAATGTTTCTTCTTTATCAATAGGCAGATTTTGGGACTGG  850

seq1  GGGATGCAGCTCTGCGGTCAAGGGCTTGTGTA  880
      ||||||||||||||||||||||||||||||||
seq2  GGGATGCAGCTCTGCGGTCAAGGGCTTGTGTA  882

seq1: chr8_14060667_14061769
seq2: B6Ng01-205M05.g_65_1174 (reverse)

seq1  GGGGCTAGATCCTTCATCCTCTCTACC-CAGT-GCTCAGCGCACCACCTG  48
      ||||||||   ||||||| |||||||| |||| |||||||||| |  |||
seq2  GGGGCTAGGATCTTCATCATCTCTACCACAGTGGCTCAGCGCAACCACTG  50

seq1  ATGAACACTGAGGA-TTCCATACTTATTAGCTGAATCCATTTTTGGG-GT  96
      ||||||| |||||| |||||||| ||| ||||||||||||||||||| ||
seq2  ATGAACATTGAGGATTTCCATAC-TATAAGCTGAATCCATTTTTGGGAGT  99

seq1  GC-AGGACTTGCTCAAACTCACCCCTGCCCGGAGCCAGGCAGG-CCAGG-  143
      || ||||||||||||||||||||| |||||| ||||||||||| ||||| 
seq2  GCAAGGACTTGCTCAAACTCACCCTTGCCCGAAGCCAGGCAGGCCCAGGA  149

seq1  ACTCCT-AATATTCTTGTTTTATGGAGAACAGACATGGTCGACATGAGCA  192
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  ACTCCTAAATATTCTGGTTTTATGGAGAACAGACATGGTCGACATGAGCA  199

seq1  AAC-AGTGGGGATTCTTACACTTTTCTCCAACCCTATCATTTCAAATGTC  241
      ||| ||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AACAAGTGGGGATTCTTACACTTTTCTCCCACCCTATCATTTCAAATGTC  249

seq1  ATTAAATGCTTATTTTATGGAATTCATAATGAAAAGCATATTTAAATAAG  291
      |||||||||||| ||||||||| |||||||||||||||||||||||||||
seq2  ATTAAATGCTTA-TTTATGGAAATCATAATGAAAAGCATATTTAAATAAG  298

seq1  TTGATAGAAAAAAATCAAAACATTTGGGTATAAGTTATAAGCATTCAAAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGAAAAAAATCAAAACATTTGGGTATAAGTTATAAGCATTCAAAG  348

seq1  TTGAGATATCAACTCCCCAGCTGAATTCTATCTCCAAGCTGTTCAAAGAC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATATCAACTCCCCAGCTGAATTCTATCTCCAAGCTGTTCAAAGAC  398

seq1  ATCCTGAGAAACCAGAGAGATGTTTTTAGCTTATGCTGACTCATGAATAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAGAAACCAGAGAGATGTTTTTAGCTTATGCTGACTCATGAATAG  448

seq1  GCTACAGGCCTCCAGCAGGGTCCTGTGTGGGAAGCAAACAGCAGCAGGCC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGGCCTCCAGCAGGGTCCTGTGTGGGAAGCAAACAGCAGCAGGCC  498

seq1  AGTCTCTGGCAGGTCCTCTGCAGATAGGGCTAGGTGTCAAGATAGAGGTC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTGGCAGGTCCTCTGCAGATAGGGCTAGGTGTCAAGATAGAGGTC  548

seq1  CATTTAGGTTAGGGAAGTGGAGACCCCATCAGAGAACTGGCAGAGGGCTG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGGTTAGGGAAGTGGAGACCCCATCAGAGAACTGGCAGAGGGCTG  598

seq1  GGCATGGTAGTGCACCCCTTGGATCCTAGCACTGGAGAGTCTGAGGAGAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGTAGTGCACCCCTTGGATCCTAGCACTGGAGAGTCTGAGGAGAG  648

seq1  CAGACTGTGAGTCTGACACCAGCCTGGGTGAAAAGGCAAGACTCTCTCAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGTGAGTCTGACACCAGCCTGGGTGAAAAGGCAAGACTCTCTCAA  698

seq1  AAGAGATAAAAAAACGTTTGGGGTGGGCCTGGAGAGATGGCTCAGCGGTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATAAAAAAACGTTTGGGGTGGGCCTGGAGAGATGGCTCAGCGGTT  748

seq1  AAGAGCACTGACTGTTCTTCCGGAGGTCCTGAGTTCAAGTCCCAGCAACT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCACTGACTGTTCTTCCGGAGGTCCTGAGTTCAAGTCCCAGCAACT  798

seq1  GCACTATGGCTCACAACCATGGTGGCTCACAACCATCTGTAATGAGATCT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTATGGCTCACAACCATGGTGGCTCACAACCATCTGTAATGAGATCT  848

seq1  GATGCCCTCTTCTGTTGTAGGCTTGTCCCAGAGCCCTGGTTCCTGGCTGA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCCTCTTCTGTTGTAGGCTTGTCCCAGAGCCCTGGTTCCTGGCTGA  898

seq1  CTTGCTTCAGGGCAGGCATGCTCCTCACCCACACATAACAGAGGTGACAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTCAGGGCAGGCATGCTCCTCACCCACACATAACAGAGGTGACAT  948

seq1  ATTTACCTCCCAGGAGCCAGGAAGCAGAGAAGAAAATGGAGAGTAGAAAC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCTCCCAGGAGCCAGGAAGCAGAGAAGAAAATGGAGAGTAGAAAC  998

seq1  ACTCTGACTTAACGTTCAATGAAAAGTGTAACTTCTGGTAATGATTTGAA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGACTTAACGTTCAATGAAAAGTGTAACTTCTGGTAATGATTTGAA  1048

seq1  GTCATGGTAACCATACCACTGAGTCTGATTAATTGCCATTGCAATGTCAA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGTAACCATACCACTGAGTCTGATTAATTGCCATTGCAATGTCAA  1098

seq1  TAGACTGAATTC  1103
      ||||||||||||
seq2  TAGACTGAATTC  1110