BAC Information

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BAC

Clone NameB6Ng01-207I21
Chromosome8 (Build37)
Map Location 51,680,918 - 51,799,627
singlet/doubletdoublet
Overlap geneLOC100039966
Upstream geneLOC100039919, EG667495, LOC100039954
Downstream geneLOC667517
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207I21.bB6Ng01-207I21.g
ACCGA026669GA026670
length537723
definitionB6Ng01-207I21.b B6Ng01-207I21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,680,918 - 51,681,460)(51,798,907 - 51,799,627)
sequence
cttataatatcatagattggagaatcagtacattactgatgtttaccaca
aactgaataaatgtttactgaaattatacaaaacagctatttttgaataa
tttttgcacttataatatatgcatttgtaagcataaatacacacaaaaat
tcctaagagaattccagatcacctggagctgggatacagatagttctgag
tagccatacttgggtcctggtaaccaaacttgggtttttgaaaaagcttt
atgtggtctcaacagctgggccatttctctagtcttagctattcttttaa
aatcgttctaatatgtgtttattaatgttatagtttttaagacattgtaa
ttgtttttaagagaggaaactatcttgtttgatatgctattaatgtcagg
aaaatcaattcattgataattttattttgaaatataaacatgttatttat
aacaggatacagttgtgaagaataaaagaagcacagttaaggaagggaga
aaagaggaaggaaggaggaaggggaaggagagaggga

gaattccacatctagcttctagttctcctccaattcagtattattgaaat
gaccaagtgattgagatctggccataagattgtcaaaacaaataattggt
ttcacattcagtgcatccatcacctcctgttcctcacccacaggctatcc
agagtgggctacaatagaagaagaaaagccactttcttgactgactgcta
accaaagaattattttaggaaattcaggagcagaggagatgattacaaca
ctggttagaaaagtactaaaggactgagttgatcagataccatggaaatg
caaggtgggtgtggcagtctcggtacagttccagctgcagatggcaaaaa
tggagaatcctcaaggtaaatatgcagccagcctcgtcagatgggccagg
cgaggcgtgattgacagctcaagtatacgtgaataagacagagaagacag
agagggtgattcctgacaacatcctccaaactgcatcacacacacacaca
cacacacacacacacacacacacacaaacacacatacacacacacacaaa
cacatacatgcacataaacacatacacatgcgcacacacacacaaataca
cataaatgcacacacaaacatacacgcataaacatatacatgcacacgta
cacacacacacacatataaacacacacacacacaacccatataacaatgg
gaggaggagaagagaagaaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_51680918_51681460
seq2: B6Ng01-207I21.b_47_589

seq1  GAATTCCTTATAATATCATAGATTGGAGAATCAGTACATTACTGATGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATAATATCATAGATTGGAGAATCAGTACATTACTGATGTTT  50

seq1  ACCACAAACTGAATAAATGTTTACTGAAATTATACAAAACAGCTATTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAAACTGAATAAATGTTTACTGAAATTATACAAAACAGCTATTTTT  100

seq1  GAATAATTTTTGCACTTATAATATATGCATTTGTAAGCATAAATACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATTTTTGCACTTATAATATATGCATTTGTAAGCATAAATACACAC  150

seq1  AAAAATTCCTAAGAGAATTCCAGATCACCTGGAGCTGGGATACAGATAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCCTAAGAGAATTCCAGATCACCTGGAGCTGGGATACAGATAGT  200

seq1  TCTGAGTAGCCATACTTGGGTCCTGGTAACCAAACTTGGGTTTTTGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTAGCCATACTTGGGTCCTGGTAACCAAACTTGGGTTTTTGAAAA  250

seq1  AGCTTTATGTGGTCTCAACAGCTGGGCCATTTCTCTAGTCTTAGCTATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTATGTGGTCTCAACAGCTGGGCCATTTCTCTAGTCTTAGCTATTC  300

seq1  TTTTAAAATCGTTCTAATATGTGTTTATTAATGTTATAGTTTTTAAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATCGTTCTAATATGTGTTTATTAATGTTATAGTTTTTAAGACA  350

seq1  TTGTAATTGTTTTTAAGAGAGGAAACTATCTTGTTTGATATGCTATTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATTGTTTTTAAGAGAGGAAACTATCTTGTTTGATATGCTATTAAT  400

seq1  GTCAGGAAAATCAATTCATTGATAATTTTATTTTGAAATATAAACATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAAAATCAATTCATTGATAATTTTATTTTGAAATATAAACATGTT  450

seq1  ATTTATAACAGGATACAGTTGTGAAGAATAAAAGAAGCACAGTTAAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAACAGGATACAGTTGTGAAGAATAAAAGAAGCACAGTTAAGGAA  500

seq1  GGGAGAAAAGAGGAAGGAAGGAGGAAGGGGAAGGAGAGAGGGA  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAAAGAGGAAGGAAGGAGGAAGGGGAAGGAGAGAGGGA  543


seq1: chr8_51798907_51799627
seq2: B6Ng01-207I21.g_65_785 (reverse)

seq1  TTTTCTTCTCTTCTCCTCCT-CCATTGTTATATGTGTTTGTGTGTGTGTG  49
      |||||||||||||||||||| ||||||||||||| | |||||||||||||
seq2  TTTTCTTCTCTTCTCCTCCTCCCATTGTTATATG-GGTTGTGTGTGTGTG  49

seq1  TGTTTATATGTGTGTGTGTGTGTACGTGTGCATGTATATGTTTATGCGTG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATATGTGTGTGTGTGTGTACGTGTGCATGTATATGTTTATGCGTG  99

seq1  TATGTTTGTGTGTGCATTTATGTGTATTTGTGTGTGTGTGCGCATGTGTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTGTGTGTGCATTTATGTGTATTTGTGTGTGTGTGCGCATGTGTA  149

seq1  TGTGTTTATGTGCATGTATGTGTTTGTGTGTGTGTGTATGTGTGTTTGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTATGTGCATGTATGTGTTTGTGTGTGTGTGTATGTGTGTTTGTG  199

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGCAGTTTGGAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGCAGTTTGGAGG  249

seq1  ATGTTGTCAGGAATCACCCTCTCTGTCTTCTCTGTCTTATTCACGTATAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTCAGGAATCACCCTCTCTGTCTTCTCTGTCTTATTCACGTATAC  299

seq1  TTGAGCTGTCAATCACGCCTCGCCTGGCCCATCTGACGAGGCTGGCTGCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTGTCAATCACGCCTCGCCTGGCCCATCTGACGAGGCTGGCTGCA  349

seq1  TATTTACCTTGAGGATTCTCCATTTTTGCCATCTGCAGCTGGAACTGTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACCTTGAGGATTCTCCATTTTTGCCATCTGCAGCTGGAACTGTAC  399

seq1  CGAGACTGCCACACCCACCTTGCATTTCCATGGTATCTGATCAACTCAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGACTGCCACACCCACCTTGCATTTCCATGGTATCTGATCAACTCAGT  449

seq1  CCTTTAGTACTTTTCTAACCAGTGTTGTAATCATCTCCTCTGCTCCTGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGTACTTTTCTAACCAGTGTTGTAATCATCTCCTCTGCTCCTGAA  499

seq1  TTTCCTAAAATAATTCTTTGGTTAGCAGTCAGTCAAGAAAGTGGCTTTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAAAATAATTCTTTGGTTAGCAGTCAGTCAAGAAAGTGGCTTTTC  549

seq1  TTCTTCTATTGTAGCCCACTCTGGATAGCCTGTGGGTGAGGAACAGGAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTATTGTAGCCCACTCTGGATAGCCTGTGGGTGAGGAACAGGAGG  599

seq1  TGATGGATGCACTGAATGTGAAACCAATTATTTGTTTTGACAATCTTATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGATGCACTGAATGTGAAACCAATTATTTGTTTTGACAATCTTATG  649

seq1  GCCAGATCTCAATCACTTGGTCATTTCAATAATACTGAATTGGAGGAGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGATCTCAATCACTTGGTCATTTCAATAATACTGAATTGGAGGAGAA  699

seq1  CTAGAAGCTAGATGTGGAATTC  721
      ||||||||||||||||||||||
seq2  CTAGAAGCTAGATGTGGAATTC  721


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