BAC Information

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BAC

Clone NameB6Ng01-208E05
Chromosome8 (Build37)
Map Location 58,243,829 - 58,390,810
singlet/doubletdoublet
Overlap geneLOC664916, Adam29
Upstream geneGm392, LOC100040212, Gm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356
Downstream geneGlra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208E05.bB6Ng01-208E05.g
ACCGA027190GA027191
length1,119992
definitionB6Ng01-208E05.b B6Ng01-208E05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,243,829 - 58,244,959)(58,390,261 - 58,390,810)
sequence
gaattcattgcttaatctactaacccatttttctacagaagagaatattt
cttggaagcacatgcattctaaccactatgctgtcacccagaactgagac
tttatattttgtttgcataagaagagtagtcttcacattgacctatgtct
ccctgaatatgccacaggaaactttgaaatatacactctgctgttcattt
gaaaactaggaaatggttactttgttttcaagagttcaagtcctcatagt
tcatgtctgagtttaatgtttcctactttttctctcactcctccttataa
tcacactaactgttcctctccctctgcgtctcaatgtagagcatttcaga
ctgaccattttccccccataacttctgtgagttgaactgagatgtaacaa
agcagccttaaactgttatttttgcctctgtctcctagttatttttctga
tcttggagggactcagcctttttacaatggcgttatcaatgaaagtgtca
gtatggaaggagagattcactgggtcttgtcactagacaaagaactatag
ataactcatgactacttggagaaggagttcttttcatggatgatacctgt
tatggttgttcaatgcagaatgctcaaccttgagacaatatacaaaccaa
aaccaaaaaaggcctcagcaggcaataatcatatgtatttgtgcatacat
atacatatgtacatgcacatacacaaatgtatatatgtgtaataataatg
atgatgataataataataatagacaataaaagaaaaagaagctattatct
taagaatgagaggatatggcaagttctgaagagggactggagggaggaaa
aggtaatgtgtaaaaatatccatatggaaacctgataagatagacacaca
cacacacactcacacacacttaaaagagtttatttgaagttatgttacat
agaagatactctctgtgaacactattgctgaagatttcctgtgctgtaca
gaagtagttagtttgttgtagtctgcttgtctaattttggatggttgcct
agctttgggacacatcaaacagcagcagcacaacttctctgatcatgtca
cccactagcttccctgttt

gaattcaatcattcagattattataaaaattaaggtactcattaaaatgt
taaatatttattatatgtatttacctttagagtctctgttcattgcttaa
atttccatagttcttactttatccatgttagaattagtgttcttaatttt
gtacaatataaacaggaatagaaacggaaggaagaactttacataataat
tagttccttgcttatttgtttttctgttgttcatatgtatgtttttagtg
ctgagccaacgttttagaaaagactaattctctcactcttatctgccatt
agttgtctctagctcttcatctaggagttggacctttcctgcatagatgt
tagcaagtcaactgtcttattttaaatgctattttaaaaattgttttatt
ggttattttattcatgtacatttcaaatgttatcccccttacaggtttcc
cctcctcaaactccctatcccatccctctttcccatggttttctgaggat
gctcctccacccacccacccactccagtctcattgtcctagcattcccct
acactggggcattgatacttcacaggaccaaaggccccccttcccatttt
tgccagataaggccatcctctgctacatatgaagctggagccttgggtcc
cccatatgtactctttggttgttggtttagtcactgggagttctgagggg
tctgagtggttgataattttcttcttcctatgttgctgaatgtcaactgc
tatcacttgtcagggtttgtttaggtagccatttcgttgaactgtcctgt
gagaaacttccgtcttcctatgcagatgaccatttcatgggagtcattct
ggtcctctgctctttataatatttctgccctctcttccatgatgtccctg
agtctttagggtaggtgttgtgttgtagatgtactaattggggtctggcc
agcccagagtcagttgtctctacattctgaacagttacagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58243829_58244959
seq2: B6Ng01-208E05.b_45_1163

seq1  GAATTCATTGCTTAATCTACTAACCCATTTTTCTACAGAAGAGAATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCTTAATCTACTAACCCATTTTTCTACAGAAGAGAATATTT  50

seq1  CTTGGAAGCACATGCATTCTAACCACTATGCTGTCACCCAGAACTGAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAGCACATGCATTCTAACCACTATGCTGTCACCCAGAACTGAGAC  100

seq1  TTTATATTTTGTTTGCATAAGAAGAGTAGTCTTCACATTGACCTATGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATTTTGTTTGCATAAGAAGAGTAGTCTTCACATTGACCTATGTCT  150

seq1  CCCTGAATATGCCACAGGAAACTTTGAAATATACACTCTGCTGTTCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAATATGCCACAGGAAACTTTGAAATATACACTCTGCTGTTCATTT  200

seq1  GAAAACTAGGAAATGGTTACTTTGTTTTCAAGAGTTCAAGTCCTCATAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTAGGAAATGGTTACTTTGTTTTCAAGAGTTCAAGTCCTCATAGT  250

seq1  TCATGTCTGAGTTTAATGTTTCCTACTTTTTCTCTCACTCCTCCTTATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCTGAGTTTAATGTTTCCTACTTTTTCTCTCACTCCTCCTTATAA  300

seq1  TCACACTAACTGTTCCTCTCCCTCTGCGTCTCAATGTAGAGCATTTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTAACTGTTCCTCTCCCTCTGCGTCTCAATGTAGAGCATTTCAGA  350

seq1  CTGACCATTTTCCCCCCATAACTTCTGTGAGTTGAACTGAGATGTAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCATTTTCCCCCCATAACTTCTGTGAGTTGAACTGAGATGTAACAA  400

seq1  AGCAGCCTTAAACTGTTATTTTTGCCTCTGTCTCCTAGTTATTTTTCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTTAAACTGTTATTTTTGCCTCTGTCTCCTAGTTATTTTTCTGA  450

seq1  TCTTGGAGGGACTCAGCCTTTTTACAATGGCGTTATCAATGAAAGTGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAGGGACTCAGCCTTTTTACAATGGCGTTATCAATGAAAGTGTCA  500

seq1  GTATGGAAGGAGAGATTCACTGGGTCTTGTCACTAGACAAAGAACTATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGAAGGAGAGATTCACTGGGTCTTGTCACTAGACAAAGAACTATAG  550

seq1  ATAACTCATGACTACTTGGAGAAGGAGTTCTTTTCATGGATGATACCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCATGACTACTTGGAGAAGGAGTTCTTTTCATGGATGATACCTGT  600

seq1  TATGGTTGTTCAATGCAGAATGCTCAACCTTGAGACAATATACAAACCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTGTTCAATGCAGAATGCTCAACCTTGAGACAATATACAAACCAA  650

seq1  AACCAAAAAAGGCCTCAGCAGGCAATAATCATATGTATTTGTGCATACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAAAAGGCCTCAGCAGGCAATAATCATATGTATTTGTGCATACAT  700

seq1  ATACATATGTACATGCACATACACAAATGTATATATGTGTAATAATAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATGTACATGCACATACACAAATGTATATATGTGTAATAATAATG  750

seq1  ATGATGATAATAATAATAATAGACAATAAAAGAAAAAGAAGCTATTATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGATAATAATAATAATAGACAATAAAAGAAAAAGAAGCTATTATCT  800

seq1  TAAGAATGAGAGGATATGGCAAGTTCTGAAGAGGGACTGGAGGGAGGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATGAGAGGATATGGCAAGTTCTGAAGAGGGACTGGAGGGAGGAAA  850

seq1  AGGTAATGTGTAAAAATATCCATATGGAAACCTGATAAGATAGACACACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATGTGTAAAAATATCCATATGGAAACCTGATAAGATAGACACACA  900

seq1  CACACACACTCACACACACTTAAAAGAGTTTAATTGAAGTTATGTTACAT  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CACACACACTCACACACACTTAAAAGAGTTTATTTGAAGTTATGTTACAT  950

seq1  AGAAGATAACTCTCTGTGAACACTATTGCTGAAGATTTCCTGTGCTGTAC  1000
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAT-ACTCTCTGTGAACACTATTGCTGAAGATTTCCTGTGCTGTAC  999

seq1  AGAAGGTAGTTAGTTTGTTGTAGTCTTGCTTGTCTAATTTTGGATTGGTT  1050
      |||| |||||||||||||||||||| |||||||||||||||||| |||||
seq2  AGAA-GTAGTTAGTTTGTTGTAGTC-TGCTTGTCTAATTTTGGA-TGGTT  1046

seq1  GCCTAGGCTTTTGGGACACATCCAAACAGCAGCAGCAACACACTTCTCTT  1100
      ||||||   |||||||||||| |||||||||||||| ||| |||||||| 
seq2  GCCTAG--CTTTGGGACACAT-CAAACAGCAGCAGC-ACA-ACTTCTCT-  1090

seq1  GGATCATTGTCACCCACTAGCTTCCCTGTTT  1131
       ||||| ||||||||||||||||||||||||
seq2  -GATCA-TGTCACCCACTAGCTTCCCTGTTT  1119


seq1: chr8_58390261_58390810
seq2: B6Ng01-208E05.g_64_613 (reverse)

seq1  AGGGGAATGCTAGGACAATGAGACTGGAGTGGGTGGGTGGGTGGAGGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAATGCTAGGACAATGAGACTGGAGTGGGTGGGTGGGTGGAGGAGC  50

seq1  ATCCTCAGAAAACCATGGGAAAGAGGGATGGGATAGGGAGTTTGAGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCAGAAAACCATGGGAAAGAGGGATGGGATAGGGAGTTTGAGGAGG  100

seq1  GGAAACCTGTAAGGGGGATAACATTTGAAATGTACATGAATAAAATAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACCTGTAAGGGGGATAACATTTGAAATGTACATGAATAAAATAACC  150

seq1  AATAAAACAATTTTTAAAATAGCATTTAAAATAAGACAGTTGACTTGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACAATTTTTAAAATAGCATTTAAAATAAGACAGTTGACTTGCTA  200

seq1  ACATCTATGCAGGAAAGGTCCAACTCCTAGATGAAGAGCTAGAGACAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTATGCAGGAAAGGTCCAACTCCTAGATGAAGAGCTAGAGACAACT  250

seq1  AATGGCAGATAAGAGTGAGAGAATTAGTCTTTTCTAAAACGTTGGCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAGATAAGAGTGAGAGAATTAGTCTTTTCTAAAACGTTGGCTCAG  300

seq1  CACTAAAAACATACATATGAACAACAGAAAAACAAATAAGCAAGGAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAAACATACATATGAACAACAGAAAAACAAATAAGCAAGGAACTA  350

seq1  ATTATTATGTAAAGTTCTTCCTTCCGTTTCTATTCCTGTTTATATTGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATGTAAAGTTCTTCCTTCCGTTTCTATTCCTGTTTATATTGTAC  400

seq1  AAAATTAAGAACACTAATTCTAACATGGATAAAGTAAGAACTATGGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAGAACACTAATTCTAACATGGATAAAGTAAGAACTATGGAAAT  450

seq1  TTAAGCAATGAACAGAGACTCTAAAGGTAAATACATATAATAAATATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCAATGAACAGAGACTCTAAAGGTAAATACATATAATAAATATTTA  500

seq1  ACATTTTAATGAGTACCTTAATTTTTATAATAATCTGAATGATTGAATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTAATGAGTACCTTAATTTTTATAATAATCTGAATGATTGAATTC  550


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