BAC Information

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BAC

Clone NameB6Ng01-209P09
Chromosome8 (Build37)
Map Location 104,098,875 - 104,099,916
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209P09.bB6Ng01-209P09.g
ACCGA028431GA028432
length1,1401,049
definitionB6Ng01-209P09.b B6Ng01-209P09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattcattctcctggccctctgagcatctctcctgtctctccac
agacctgatcctgcctcctaattctcgtcctcctcccctttctcacccaa
ttttattcccccctctgccacctatgactattttgtttccccttttaagt
gttattcaagcatctttgcttgagacttccttcttgtttaacttctttgg
gtctgtggagtgtttcatgggtattctgtactttgtggctaatacccatt
tatcagtgaatacatatcatgtatgtctttctgggtgtggatatcctcat
tcaggatgatatttttctagtcccatctatttgtctgcaaaattgatgat
gtccatatatttaaaagctaaatagtattcattcttaggtcataggagtt
ctgggttgtttctagtttctggttattacaaaaaagctgctatgaacaca
gtggagcatgtgttcttgtggtatggcatcttttgtttttatgcccaaga
gcagcatagctgggtcttcacatagaactatttccaattttcagaggata
caaattggaaaagaagaagtcaaggtatcacatattcagaagcgatcctc
aaacttctaccacagaactactacagctggtaaacaacttcaaaaatgtg
gctagatataaaattaacaaaaagaaattagtaactgtcctctatacaaa
cgagaaagggacaaagaaagaaattaggaaaacaactcccttcacaatag
tcacaaaaatatacaatatcttgatgtaattctaaccagaaccaaggctc
agggaatgttgaagagaaaggagacaaaaaggttgtaagagcccaaggat
gggggatttgctgtgggattgtatctcctagtaatatcagaagttatacc
catacaatttcagtgatatgactgccctaatgtgagttgaacatggatgc
accaatgacagattaaattagaagtggtaagcccacaaggatctgattct
acagaaagagatagacaacctcaagagcaggatcaggagaacttgggaag
agcaaatcatgagctgtcaaggtcaggtagtcacaccgaaacatatgtac
attatacagtctctaacaagttccttaggaaaataaattt

gaattcacagataagtgaataggactttaaattatttgttgatccttagg
tttatacaaccaggagtaactatagaagtcacaaaattaaaaaggtcacc
aagggaggagggacaaagaaggatcattagagaggaggatagcaaggtat
cagtgcattcaagagggagttgttgaggtgcttgactaacaagaaggaaa
aaaggtaatccagtatgaagaggagggaggaaaaataaataatatcaaga
atcattgtgaaaacctttattacataaacttacttcaatatacttactca
tattacaaaaaaaatgagtattctattggcagtaattgggtggtgtgaca
taggagtaattatagggaagaaaggccagtcgaacagatgaaaatacatt
ttatttatctgtaaaatcctcagacttaaaaataataacaaaactgaaat
atacctttattgcacttgtacatgaattaacttttaacattacattacag
tttatttggaagttgtaagcgtaagcattggcttactgttccttcatgca
ttaaggccttatgattctttctccccactaaagatattgtgtaataagaa
ttggtaggttgcagatagtttccatagaccatggagggttgatttggacc
aggggtattgtatatcaacataaatagaacagtggtttccagaaataaat
aactgagtccttgttttgttttgttttgttttgttttgtttgtttgtttg
cattactatactggaatcattctgcaagcagttttattttttttaatttc
tgtttttcaaagaatacagtgagtcacataaaggttacagattctgtcca
agaaaaagatttgttattgaagagcaccttagctaaaatataatcttctc
caatgtcctgctgatgttctttttcacttttcttgttagaactaactgga
accctttcttgccatgaagcccaaacatttaaatctccagcttcaaagaa
aaaatcaatgtgtacttgctaactcctttcttttgcttgatagtaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_104098875_104099916
seq2: B6Ng01-209P09.g_67_1115 (reverse)

seq1  AATTAACTA-CAAGC-AAAGAAAGGAAGTAAGCAAGTACACA-TGATTTT  47
      |||| |||| ||||| ||||||||| ||| |||||||||||| |||||||
seq2  AATTTACTATCAAGCAAAAGAAAGG-AGTTAGCAAGTACACATTGATTTT  49

seq1  TTCTTTTAAAGCT-GAGATTTAAATGTTT-GGCTTCATGGCAAGAAAGGG  95
      ||| ||| ||||| ||||||||||||||| ||||||||||||||||||||
seq2  TTC-TTTGAAGCTGGAGATTTAAATGTTTGGGCTTCATGGCAAGAAAGGG  98

seq1  TT-CAG-TAGTTCTAACAAGAAAAGTG-AAAAGAACATCAGCAGGACATT  142
      || ||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  TTCCAGTTAGTTCTAACAAGAAAAGTGAAAAAGAACATCAGCAGGACATT  148

seq1  GGAGAAGATTATATTTTAGCT-AGGTGCTCTTCAATAACAAATCTTTTTC  191
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGAGAAGATTATATTTTAGCTAAGGTGCTCTTCAATAACAAATCTTTTTC  198

seq1  TTTGACAGAATCTGTGAGCCTTTATGTGACTCACTGTATTCTTTGAAAAA  241
      || |||||||||||| | ||||||||||||||||||||||||||||||||
seq2  TTGGACAGAATCTGT-AACCTTTATGTGACTCACTGTATTCTTTGAAAAA  247

seq1  CAGAAATT-AAAAAAATAAAACTGCTTGCAGAATGATTCCAGTATAGTAA  290
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATTAAAAAAAATAAAACTGCTTGCAGAATGATTCCAGTATAGTAA  297

seq1  TGCAAACAAACAAACAAAACAAAACAAAACAAAACAAAACAAGGACTCAG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACAAACAAACAAAACAAAACAAAACAAAACAAAACAAGGACTCAG  347

seq1  TTATTTATTTCTGGAAACCACTGTTCTATTTATGTTGATATACAATACCC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTCTGGAAACCACTGTTCTATTTATGTTGATATACAATACCC  397

seq1  CTGGTCCAAATCAACCCTCCATGGTCTATGGAAACTATCTGCAACCTACC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCCAAATCAACCCTCCATGGTCTATGGAAACTATCTGCAACCTACC  447

seq1  AATTCTTATTACACAATATCTTTAGTGGGGAGAAAGAATCATAAGGCCTT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTATTACACAATATCTTTAGTGGGGAGAAAGAATCATAAGGCCTT  497

seq1  AATGCATGAAGGAACAGTAAGCCAATGCTTACGCTTACAACTTCCAAATA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATGAAGGAACAGTAAGCCAATGCTTACGCTTACAACTTCCAAATA  547

seq1  AACTGTAATGTAATGTTAAAAGTTAATTCATGTACAAGTGCAATAAAGGT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAATGTAATGTTAAAAGTTAATTCATGTACAAGTGCAATAAAGGT  597

seq1  ATATTTCAGTTTTGTTATTATTTTTAAGTCTGAGGATTTTACAGATAAAT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCAGTTTTGTTATTATTTTTAAGTCTGAGGATTTTACAGATAAAT  647

seq1  AAAATGTATTTTCATCTGTTCGACTGGCCTTTCTTCCCTATAATTACTCC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTATTTTCATCTGTTCGACTGGCCTTTCTTCCCTATAATTACTCC  697

seq1  TATGTCACACCACCCAATTACTGCCAATAGAATACTCATTTTTTTTGTAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCACACCACCCAATTACTGCCAATAGAATACTCATTTTTTTTGTAA  747

seq1  TATGAGTAAGTATATTTAAGTAAGTTTATGTAATAAAGGTTTTCACAATG  790
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TATGAGTAAGTATATTGAAGTAAGTTTATGTAATAAAGGTTTTCACAATG  797

seq1  ATTCTTGATATTATTTATTTTTCCTCCCTCCTCTTCATACTGGATTACCT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGATATTATTTATTTTTCCTCCCTCCTCTTCATACTGGATTACCT  847

seq1  TTTTTCCTTCTTGTTAGTCAAGCACCTCAACAACTCCCTCTTGAATGCAC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTTCTTGTTAGTCAAGCACCTCAACAACTCCCTCTTGAATGCAC  897

seq1  TGATACCTTGCTATCCTCCTCTCTAATGATCCTTCTTTGTCCCTCCTCCC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACCTTGCTATCCTCCTCTCTAATGATCCTTCTTTGTCCCTCCTCCC  947

seq1  TTGGTGACCTTTTTAATTTTGTGACTTCTATAGTTACTCCTGGTTGTATA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGACCTTTTTAATTTTGTGACTTCTATAGTTACTCCTGGTTGTATA  997

seq1  AACCTAAGGATCAACAAATAATTTAAAGTCCTATTCACTTATCTGTGAAT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAAGGATCAACAAATAATTTAAAGTCCTATTCACTTATCTGTGAAT  1047

seq1  TC  1042
      ||
seq2  TC  1049


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