BAC Information

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BAC

Clone NameB6Ng01-211A13
Chromosome8 (Build37)
Map Location 57,983,422 - 58,009,513
singlet/doubletdoublet
Overlap geneEG664818, EG664834, EG664859
Upstream geneGm392, LOC100040212, Gm1153, EG664808
Downstream geneEG664876, LOC100040356, LOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211A13.bB6Ng01-211A13.g
ACCGA029217GA029218
length632339
definitionB6Ng01-211A13.b B6Ng01-211A13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,008,882 - 58,009,513)(57,983,422 - 57,983,760)
sequence
gaattccacagcctggcatgaaccaatttttactaagagttttactaact
ttacaaaaaaaatccatgtataagacctattttttcttttaataatggca
tcagggaggattatggtgtagtgagtaaatgttatgtaattatgctgtat
ggatttaaagcacttgtaaattgtaaaatactggatctaaaatgttgtaa
tttacttgagtgtttgattaagcaatttttggaaagaaattctcttaaat
ttatgaaatcttcaaaattccagttgtgacctgatgatacaaaacattca
catttattatatatgcacaacaaagactataaatgtaagaacatgtaggc
taatatttctgttcatatctcaagtcaacatcaaaatcatgagcaaaata
ctgtcaaattaatcacacattttcttctgtgttagagggttattgtaaac
atcatatctttttgttcattgacaaaacttgaatcataaagggaggttta
ttaaacccataactctccagtggatacctacatactcatggacacacacc
aaaatcatagtgtataacaaagtgaaagatgagcgagagaggaggggaga
gagagtgaagaaagggggaagtggagggatga
aaggcaaggtacagataaccctagacacagagacacagaatcccatctaa
agccctgaaatgcaaaggtgtggctgtgcacctggttctatgcacctgtg
tggacttccattggctacaaggttgtgggaagaagcagcaagaggctttc
agcaaacaggtgcctccaataagttttcctacaaaggaaaggactttgcc
ctaaggaggttcagtgggtggaggtcacatggctgggtggccattttgca
gtatgaggaaatgtatgaggagaacagattccatcctgttttgtttgttg
gtttacttagctggttttggtgttggtgttggtgttggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58008882_58009513
seq2: B6Ng01-211A13.b_46_677 (reverse)

seq1  TCATCCCTCCACTTCCCCCTTTCTTCACTCTCTCTCCCCTCCTCTCTCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCTCCACTTCCCCCTTTCTTCACTCTCTCTCCCCTCCTCTCTCGC  50

seq1  TCATCTTTCACTTTGTTATACACTATGATTTTGGTGTGTGTCCATGAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTCACTTTGTTATACACTATGATTTTGGTGTGTGTCCATGAGTA  100

seq1  TGTAGGTATCCACTGGAGAGTTATGGGTTTAATAAACCTCCCTTTATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGTATCCACTGGAGAGTTATGGGTTTAATAAACCTCCCTTTATGAT  150

seq1  TCAAGTTTTGTCAATGAACAAAAAGATATGATGTTTACAATAACCCTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTTTGTCAATGAACAAAAAGATATGATGTTTACAATAACCCTCTA  200

seq1  ACACAGAAGAAAATGTGTGATTAATTTGACAGTATTTTGCTCATGATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAGAAAATGTGTGATTAATTTGACAGTATTTTGCTCATGATTTT  250

seq1  GATGTTGACTTGAGATATGAACAGAAATATTAGCCTACATGTTCTTACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTGACTTGAGATATGAACAGAAATATTAGCCTACATGTTCTTACAT  300

seq1  TTATAGTCTTTGTTGTGCATATATAATAAATGTGAATGTTTTGTATCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTCTTTGTTGTGCATATATAATAAATGTGAATGTTTTGTATCATC  350

seq1  AGGTCACAACTGGAATTTTGAAGATTTCATAAATTTAAGAGAATTTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACAACTGGAATTTTGAAGATTTCATAAATTTAAGAGAATTTCTTT  400

seq1  CCAAAAATTGCTTAATCAAACACTCAAGTAAATTACAACATTTTAGATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAATTGCTTAATCAAACACTCAAGTAAATTACAACATTTTAGATCC  450

seq1  AGTATTTTACAATTTACAAGTGCTTTAAATCCATACAGCATAATTACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTACAATTTACAAGTGCTTTAAATCCATACAGCATAATTACATA  500

seq1  ACATTTACTCACTACACCATAATCCTCCCTGATGCCATTATTAAAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACTCACTACACCATAATCCTCCCTGATGCCATTATTAAAAGAAA  550

seq1  AAATAGGTCTTATACATGGATTTTTTTTGTAAAGTTAGTAAAACTCTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGTCTTATACATGGATTTTTTTTGTAAAGTTAGTAAAACTCTTAG  600

seq1  TAAAAATTGGTTCATGCCAGGCTGTGGAATTC  632
      ||||||||||||||||||||||||||||||||
seq2  TAAAAATTGGTTCATGCCAGGCTGTGGAATTC  632

seq1: chr8_57983422_57983760
seq2: B6Ng01-211A13.g_74_412

seq1  AAGGCAAGGTGCAGATAACCCTAGACACAGAGGCACAGAATCCCATCTAC  50
      |||||||||| ||||||||||||||||||||| |||||||||||||||| 
seq2  AAGGCAAGGTACAGATAACCCTAGACACAGAGACACAGAATCCCATCTAA  50

seq1  AACCCTGAAATACAAAGGTGTGGCTGTGCACCTGGTTCTATGCACCTGTG  100
      | ||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGAAATGCAAAGGTGTGGCTGTGCACCTGGTTCTATGCACCTGTG  100

seq1  TGGACTTCCATTGGCTACAAGGTTGTGGGAAGAAGCAGCAAGAGGCTTGC  150
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGGACTTCCATTGGCTACAAGGTTGTGGGAAGAAGCAGCAAGAGGCTTTC  150

seq1  AGCAAACAGGTGCCTCCAATAAGTTTTCCTACAAAGGAAAGGAATTTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGCAAACAGGTGCCTCCAATAAGTTTTCCTACAAAGGAAAGGACTTTGCC  200

seq1  CTAAGGAGGTTCAGTGGGTGGAGGTCACATGGCCGGGTCGCCATTTTGCA  250
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  CTAAGGAGGTTCAGTGGGTGGAGGTCACATGGCTGGGTGGCCATTTTGCA  250

seq1  GTATGAGGAAATGTATGAGGAGAACAGATTCCATCCTGTTTTGTTTGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGGAAATGTATGAGGAGAACAGATTCCATCCTGTTTTGTTTGTTG  300

seq1  GTTTACTTAGTTGGTTTTGGTGTTGGTGTTGGTGTTGGT  339
      |||||||||| ||||||||||||||||||||||||||||
seq2  GTTTACTTAGCTGGTTTTGGTGTTGGTGTTGGTGTTGGT  339