BAC Information

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BAC

Clone NameB6Ng01-211N17
Chromosome8 (Build37)
Map Location 61,835,004 - 61,836,178
singlet/doubletsinglet
Overlap genenone
Upstream gene4930431L04Rik, BC030500, LOC665116, LOC436042
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211N17.bB6Ng01-211N17.g
ACCGA029804GA029805
length1,1681,189
definitionB6Ng01-211N17.b B6Ng01-211N17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgttcatgcttttgaagttgtatccaagttctgggatacata
ataccattatgtattataatttgtgaactgagatcaagtgacacatggaa
gcctatttggtgcactttgggagatctccactgcactgcagtgccttagt
aaaacttcattctgaatagagaacatttgtttaaaagtattaacttttac
ttcaaacaaaatacccagtgagtgtaggtctataaaaatatctaccaaat
tcaagttcctatgttgtttttataatgatttgaacaaagttaatttcaaa
atggagcatattagactcaaatatatagttgttcaaaattgttgagtttc
ttttgatagtttaggagtgcttgttatataaggggacctaattttaaatc
actgcttcagataatgttaatctccaatcaggaatcaatgagggcagaag
aatatacaagtgctattgacatataactaaggtcattaataagtcgaata
gatattaaacatttctgaaaatggtaaaatggggtttccaatttacaatg
ttatgggatgtcacgtttgtatcttaagttacacatagaaagcatacaga
atctgtatagatcaatgttgtggagcacgattccctatccagagtactgc
cagtagtgtatctagcctccttataaatgatcactgggttttgggcttca
agtcttcaaagtcatttaccttcaaatgtttttcaagaaaatgaagtgct
ttcttcagcaaattgaaattctcagaggtctgaaataagtacatacacac
ttcatgtttcttcttatttgcatgcttagagaaatttgacatcaatcact
attattaaaaattcatggtattttgcacaggccccagacatccggccact
ctcctggccagaggatagggttcgtccagcccggaagcgctttgcctgag
catctgtggcagacatcttggtttccccgccgagagtattctgcaacagt
gagagagtagatacagaaggctaacagcttctgggacagccaaagcactt
cagccatggacaggcctgttttggcctttgtcttagccaggaggaaagtc
ctacaccagaaatatcaggcactttcctgtagaagagaagcctgctgccg
aagtgctctaaccactga

gaattctcacctgaggaatactgactggctgagaagcatctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaaaaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaagattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaataagtctggcggttcctca
gaaaactgggtatagtactacgggaggatcctgcaatacctctcctgggc
atatatccagaagatgttccaacatctggtaagaaggacacatgctccac
tatgttcatagcagccttatttataatagtcagaagccggaaagaaccca
gatgcccctcatagaggaatggatacagaaaatatggtacatttacacaa
tggagtactactcagctgttaaaaagaatgaatttatgaaattcctaggc
aaatggattgacctggagggtatcatcctgagtgaggtaacccaatcaca
aaggaactcacacaatacgtactcactgataagtggatatttgcccagaa
acttaggatacccaagatataacatagaatttgctaaacacatgaaactg
aagaagaatggagaccaaagtgtggacactttgccccttcttagaattgg
gaacaaaacacccatggaaggagttacagggacaaagtttggagctgtgt
caaaaggatggtccatctagagcctgccatatccagggttccatcccata
atcagcttccaaacgctgacatcattgcatacactagcaagagtttgctg
gaaaggaccctgatatagctgtctcttgtgagactatgcccgggcctggg
caaacacagaaggtggatgctcacagtcagctattggatggatcacaggg
cccccaatttgaagaagctagaagaaagtacacaaggagctaaggggatc
tgcaaccctataggtagacaccatatgaactaaccagtacccctgagctc
ttgtctctagctgccatatgtatcaaaagaatgtcttagctggtcattca
cttaaagagagtctattgaacttgcaatattaatgctcagtaaggtaact
gcaaggtcaaaaagtggggaattgtgctggcgctaagcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61835004_61836178
seq2: B6Ng01-211N17.b_46_1213

seq1  GAATTCATTGTTCATGCTTTTGAAGTTGTATCCAAGTTCTGGGATACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTTCATGCTTTTGAAGTTGTATCCAAGTTCTGGGATACATA  50

seq1  ATACCATTATGTATTATAATTTGTGAACTGAGATCAAGTGACACATGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATTATGTATTATAATTTGTGAACTGAGATCAAGTGACACATGGAA  100

seq1  GCCTATTTGGTGCACTTTGGGAGATCTCCACTGCACTGCAGTGCCTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATTTGGTGCACTTTGGGAGATCTCCACTGCACTGCAGTGCCTTAGT  150

seq1  AAAACTTCATTCTGAATAGAGAACATTTGTTTAAAAGTATTAACTTTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTCATTCTGAATAGAGAACATTTGTTTAAAAGTATTAACTTTTAC  200

seq1  TTCAAACAAAATACCCAGTGAGTGTAGGTCTATAAAAATATCTACCAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAAAATACCCAGTGAGTGTAGGTCTATAAAAATATCTACCAAAT  250

seq1  TCAAGTTCCTATGTTGTTTTTATAATGATTTGAACAAAGTTAATTTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTCCTATGTTGTTTTTATAATGATTTGAACAAAGTTAATTTCAAA  300

seq1  ATGGAGCATATTAGACTCAAATATATAGTTGTTCAAAATTGTTGAGTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCATATTAGACTCAAATATATAGTTGTTCAAAATTGTTGAGTTTC  350

seq1  TTTTGATAGTTTAGGAGTGCTTGTTATATAAGGGGACCTAATTTTAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATAGTTTAGGAGTGCTTGTTATATAAGGGGACCTAATTTTAAATC  400

seq1  ACTGCTTCAGATAATGTTAATCTCCAATCAGGAATCAATGAGGGCAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTCAGATAATGTTAATCTCCAATCAGGAATCAATGAGGGCAGAAG  450

seq1  AATATACAAGTGCTATTGACATATAACTAAGGTCATTAATAAGTCGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACAAGTGCTATTGACATATAACTAAGGTCATTAATAAGTCGAATA  500

seq1  GATATTAAACATTTCTGAAAATGGTAAAATGGGGTTTCCAATTTACAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAAACATTTCTGAAAATGGTAAAATGGGGTTTCCAATTTACAATG  550

seq1  TTATGGGATGTCACGTTTGTATCTTAAGTTACACATAGAAAGCATACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGATGTCACGTTTGTATCTTAAGTTACACATAGAAAGCATACAGA  600

seq1  ATCTGTATAGATCAATGTTGTGGAGCACGATTCCCTATCCAGAGTACTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTATAGATCAATGTTGTGGAGCACGATTCCCTATCCAGAGTACTGC  650

seq1  CAGTAGTGTATCTAGCCTCCTTATAAATGATCACTGGGTTTTGGGCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTGTATCTAGCCTCCTTATAAATGATCACTGGGTTTTGGGCTTCA  700

seq1  AGTCTTCAAAGTCATTTACCTTCAAATGTTTTTCAAGAAAATGAAGTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCAAAGTCATTTACCTTCAAATGTTTTTCAAGAAAATGAAGTGCT  750

seq1  TTCTTCAGCAAATTGAAATTCTCAGAGGTCTGAAATAAGTACATACACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGCAAATTGAAATTCTCAGAGGTCTGAAATAAGTACATACACAC  800

seq1  TTCATGTTTCTTCTTATTTGCATGCTTAGAGAAATTTGACATCAATCACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTTTCTTCTTATTTGCATGCTTAGAGAAATTTGACATCAATCACT  850

seq1  ATTATTAAAAATTCATGGTATTTTGCACAGGCCCCAGACATCCGGCCACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAAAAATTCATGGTATTTTGCACAGGCCCCAGACATCCGGCCACT  900

seq1  CTCCTGGCCAGAGGATAGGGGTTCGTCCAGCCCGGAAGCGCTTTGCCTGA  950
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTCCTGGCCAGAGGATA-GGGTTCGTCCAGCCCGGAAGCGCTTTGCCTGA  949

seq1  GCATCTGTGGCAGACATCTTGG-TTCCCCGCCGAGAGTATTCTGCACAGG  999
      |||||||||||||||||||||| |||||||||||||||||||||||   |
seq2  GCATCTGTGGCAGACATCTTGGTTTCCCCGCCGAGAGTATTCTGCAACAG  999

seq1  TGAGAGAGTAGAATACAGAA-GCTAACAGCTTCTGGGACAGGCCAAAGCA  1048
      ||||||||||| |||||||| ||||||||||||||||||| |||||||||
seq2  TGAGAGAGTAG-ATACAGAAGGCTAACAGCTTCTGGGACA-GCCAAAGCA  1047

seq1  ACTCAGCCATGGACAGGGCCTGTTTTGGGCCTTTGTCTTAGGCCGGGAGG  1098
        ||||||||||||| |||||||||| ||||||||||||| ||| |||||
seq2  CTTCAGCCATGGACA-GGCCTGTTTT-GGCCTTTGTCTTA-GCCAGGAGG  1094

seq1  GAAGTCCTAACACCAG--ATATCAGTGCACCTTCCCTGTAAGAGGAG-AG  1145
       ||||||| |||||||  ||||||| ||| ||| ||||| ||| ||| ||
seq2  AAAGTCCT-ACACCAGAAATATCAG-GCA-CTTTCCTGT-AGAAGAGAAG  1140

seq1  CTTGCCTGCAGAGAGTGCTCTAACCACTGA  1175
      | || |||| || |||||||||||||||||
seq2  CCTG-CTGCCGA-AGTGCTCTAACCACTGA  1168


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