BAC Information

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BAC

Clone NameB6Ng01-212B14
Chromosome8 (Build37)
Map Location 64,019,740 - 64,201,788
singlet/doubletdoublet
Overlap genePalld, LOC100040872
Upstream geneAadat, Mfap3l, LOC100040679, 2700029M09Rik, Clcn3, B230317F23Rik, Nek1, Sh3rf1, EG664975, Cbr4
Downstream geneBC013672, Anxa10, LOC100040775, LOC384830, LOC100040804, LOC665267
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212B14.bB6Ng01-212B14.g
ACCGA029983GA029984
length6331,100
definitionB6Ng01-212B14.b B6Ng01-212B14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,019,740 - 64,020,372)(64,200,694 - 64,201,788)
sequence
gaattccagggccaagaagcgggagtgggtgggtaggggagcagggcgga
gggagggtatagggaacttttgggatagcatttaaaatgtatataaagaa
aatatctaataagtaaataaataaataaaaaggaaaaagaaatggttgtt
tggatatatctcgttaggcaggatatttctaaataataatagaaagctta
ctgtaaaggtatcaaagcatcatccaccgacaccattattgaccatgtaa
agaagtaacgggcttaccaacttttgatttcttattgatctgtttaaccc
tgctgggaagcacgtaagcagaaactgcaaggaccttgtaactgctccac
tgcctacaccggtcgtcagtgatgccacctatcctggggactgtgcacct
agtcttcccagcagtctttcttccctatggtccacacttctctgaatcct
tcttgaacgttcctgattctggtaggtgtttttcctgaatgcttagggag
tcactctctgtcttggtttgtatatgcttggcccagggagtggcactatt
aggaggtgtagtcactgtgggcatgggctttaagaccctcatcctagctt
tccagaagccagtattctgctatcagccttcag
gaattccagatggtgctgaggcagctgtcccaaggtctacagtttgaaaa
accaaaaaacaggcactggagaacttttcctccaaagtgagtttcagcaa
ggaacagtcagtgtatttaacctccttccctgctcctctgtgaggcaaaa
gcagccacaggtgatatgtaaatgaatgaatgaggttagactttaaaaaa
gaaagctttattgactacaaagtttgaggttattataattttcagtgtcc
caaaatattattcttctcctgattgtttcccccttctcagctattcagaa
atatatcaagcaggatttgctggcaaccatgttaaaacaggctgcagagt
gtgcatttgctgaattagagggtgagattctgcacgcacgcatgtatagc
tgacagtggccgcccatccacccgatgggcatcattctcttcttaaacct
ccccgtatattttcatgaagcatttccccctaatagtgtgtttatatctt
ctttttcctggaagacaaagctatctactgccagaacagatgcacaaact
ccacattcatttcagagtttaccagacacaattccgttcctttgtttaga
caacactcagcggctgtatggtcagtggagtgtgtctgttgatcaagcct
ttggcttggcctgggagaagatatttgtaatgaggattaatgcagaggac
cagaggagacttgcaaagaagggaaggtgtgggctcgaagggtaggagag
taacctgtgaggcgatgtaacagtgtagagtccccggaatatttgacaga
aaacaggattttattgtaaaaagaacaatagaaaataaaaccaaggtgaa
gtcactaggaagccatcaatgacagacctgggtataaggagtgacagaca
ggttggaagaaattcaagagctttcgtggtggtgacagacatggaattta
ccattattttcagaggtaggggatcatcactaaggccaatatcaccgttt
agtgctagtggtagcatgctgtacttatggcttgtgtaggagagaagaac
gggatagacttggctttaaagctgatggaatctctagacttcttatacaa

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_64019740_64020372
seq2: B6Ng01-212B14.b_50_682

seq1  GAATTCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGGGAGCAGGGCGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCCAAGAAGCGGGAGTGGGTGGGTAGGGGAGCAGGGCGGA  50

seq1  GGGAGGGTATAGGGAACTTTTGGGATAGCATTTAAAATGTATATAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGTATAGGGAACTTTTGGGATAGCATTTAAAATGTATATAAAGAA  100

seq1  AATATCTAATAAGTAAATAAATAAATAAAAAGGAAAAAGAAATGGTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTAATAAGTAAATAAATAAATAAAAAGGAAAAAGAAATGGTTGTT  150

seq1  TGGATATATCTCGTTAGGCAGGATATTTCTAAATAATAATAGAAAGCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATATCTCGTTAGGCAGGATATTTCTAAATAATAATAGAAAGCTTA  200

seq1  CTGTAAAGGTATCAAAGCATCATCCACCGACACCATTATTGACCATGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAAGGTATCAAAGCATCATCCACCGACACCATTATTGACCATGTAA  250

seq1  AGAAGTAACGGGCTTACCAACTTTTGATTTCTTATTGATCTGTTTAACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAACGGGCTTACCAACTTTTGATTTCTTATTGATCTGTTTAACCC  300

seq1  TGCTGGGAAGCACGTAAGCAGAAACTGCAAGGACCTTGTAACTGCTCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAAGCACGTAAGCAGAAACTGCAAGGACCTTGTAACTGCTCCAC  350

seq1  TGCCTACACCGGTCGTCAGTGATGCCACCTATCCTGGGGACTGTGCACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACACCGGTCGTCAGTGATGCCACCTATCCTGGGGACTGTGCACCT  400

seq1  AGTCTTCCCAGCAGTCTTTCTTCCCTATGGTCCACACTTCTCTGAATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCCCAGCAGTCTTTCTTCCCTATGGTCCACACTTCTCTGAATCCT  450

seq1  TCTTGAACGTTCCTGATTCTGGTAGGTGTTTTTCCTGAATGCTTAGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAACGTTCCTGATTCTGGTAGGTGTTTTTCCTGAATGCTTAGGGAG  500

seq1  TCACTCTCTGTCATGGTTTGTATATGCTTGGCCCAGGGAGTGGCACTATT  550
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCACTCTCTGTCTTGGTTTGTATATGCTTGGCCCAGGGAGTGGCACTATT  550

seq1  AGGAGGTGTAGTCACTGTGGGCATGGGCTTTAAGACCCTCATCCTAGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTGTAGTCACTGTGGGCATGGGCTTTAAGACCCTCATCCTAGCTT  600

seq1  CCCAGAAGCCAGTATTCTGCTAGCAGCCTTCAG  633
       ||||||||||||||||||||| ||||||||||
seq2  TCCAGAAGCCAGTATTCTGCTATCAGCCTTCAG  633

seq1: chr8_64200694_64201788
seq2: B6Ng01-212B14.g_71_1170 (reverse)

seq1  TTGTATA--GAGTCTTAGAGA-TCCATCCAGCTTT-AAGCCATGTCTATC  46
      |||||||   |||| |||||| ||||| ||||||| |||||| |||||| 
seq2  TTGTATAAGAAGTC-TAGAGATTCCAT-CAGCTTTAAAGCCAAGTCTAT-  47

seq1  CCCTTTCTTCTCTCTTTACAC-AGCCAT-AGTACAGCATGCTACCCACTA  94
      ||| ||||||||||  ||||| |||||| |||||||||||||| ||||||
seq2  CCCGTTCTTCTCTC-CTACACAAGCCATAAGTACAGCATGCTA-CCACTA  95

seq1  GCACTAAACGGTGATATTGGCCTTAGTTGATGATCCCCTACCTCTGAAA-  143
      |||||||||||||||||||||||||| |||||||||||||||||||||| 
seq2  GCACTAAACGGTGATATTGGCCTTAG-TGATGATCCCCTACCTCTGAAAA  144

seq1  -TATGGTAAATTCCATGTCTGTCACCA-CACGAAAGCTCTTGAATTTCTT  191
        ||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAATGGTAAATTCCATGTCTGTCACCACCACGAAAGCTCTTGAATTTCTT  194

seq1  CC-ACCTGTCTGTCACTCCTTATACCCAGGTCTGTCATTGATGGCTTCCT  240
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTGTCTGTCACTCCTTATACCCAGGTCTGTCATTGATGGCTTCCT  244

seq1  AGTGACTTCACCTTGGTTTTATTTTCTATTGTTCTTTTTACAATAAAATC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTTCACCTTGGTTTTATTTTCTATTGTTCTTTTTACAATAAAATC  294

seq1  CTG-TTTCTGTCAAATATTCCGGGGACTCTACACTGTTACATCGCCTCAC  339
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCTGTCAAATATTCCGGGGACTCTACACTGTTACATCGCCTCAC  344

seq1  AGGTTACTCTCCTACCCTTCGAGCCCACACCTTCCCTTCTTTGCAAGTCT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTACTCTCCTACCCTTCGAGCCCACACCTTCCCTTCTTTGCAAGTCT  394

seq1  CCTCTGGTCCTCTGCATTAATCCTCATTACAAATATCTTCTCCCAGGCCA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGTCCTCTGCATTAATCCTCATTACAAATATCTTCTCCCAGGCCA  444

seq1  AGCCAAAGGCTTGATCAACAGACACACTCCACTGACCATACAGCCGCTGA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAGGCTTGATCAACAGACACACTCCACTGACCATACAGCCGCTGA  494

seq1  GTGTTGTCTAAACAAAGGAACGGAATTGTGTCTGGTAAACTCTGAAATGA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTCTAAACAAAGGAACGGAATTGTGTCTGGTAAACTCTGAAATGA  544

seq1  ATGTGGAGTTTGTGCATCTGTTCTGGCAGTAGATAGCTTTGTCTTCCAGG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAGTTTGTGCATCTGTTCTGGCAGTAGATAGCTTTGTCTTCCAGG  594

seq1  AAAAAGAAGATATAAACACACTATTAGGGGGAAATGCTTCATGAAAATAT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAGATATAAACACACTATTAGGGGGAAATGCTTCATGAAAATAT  644

seq1  ACGGGGAGGTTTAAGAAGAGAATGATGCCCATCGGGTGGATGGGCGGCCA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGGAGGTTTAAGAAGAGAATGATGCCCATCGGGTGGATGGGCGGCCA  694

seq1  CTGTCAGCTATACATGCGTGCGTGCAGAATCTCACCCTCTAATTCAGCAA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGCTATACATGCGTGCGTGCAGAATCTCACCCTCTAATTCAGCAA  744

seq1  ATGCACACTCTGCAGCCTGTTTTAACATGGTTGCCAGCAAATCCTGCTTG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACACTCTGCAGCCTGTTTTAACATGGTTGCCAGCAAATCCTGCTTG  794

seq1  ATATATTTCTGAATAGCTGAGAAGGGGGAAACAATCAGGAGAAGAATAAT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTCTGAATAGCTGAGAAGGGGGAAACAATCAGGAGAAGAATAAT  844

seq1  ATTTTGGGACACTGAAAATTATAATAACCTCAAACTTTGTAGTCAATAAA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGGACACTGAAAATTATAATAACCTCAAACTTTGTAGTCAATAAA  894

seq1  GCTTTCTTTTTTAAAGTCTAACCTCATTCATTCATTTACATATCACCTGT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTTTTTTAAAGTCTAACCTCATTCATTCATTTACATATCACCTGT  944

seq1  GGCTGCTTTTGCCTCACAGAGGAGCAGGGAAGGAGGTTAAATACACTGAC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTTTTGCCTCACAGAGGAGCAGGGAAGGAGGTTAAATACACTGAC  994

seq1  TGTTCCTTGCTGAAACTCACTTTGGAGGAAAAGTTCTCCAGTGCCTGTTT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTTGCTGAAACTCACTTTGGAGGAAAAGTTCTCCAGTGCCTGTTT  1044

seq1  TTTGGTTTTTCAAACTGTAGACCTTGGGACAGCTGCCTCAGCACCATCTG  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTTCAAACTGTAGACCTTGGGACAGCTGCCTCAGCACCATCTG  1094

seq1  GAATTC  1095
      ||||||
seq2  GAATTC  1100