BAC Information

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BAC

Clone NameB6Ng01-212C15
Chromosome8 (Build37)
Map Location 40,396,430 - 40,397,596
singlet/doubletsinglet
Overlap geneEG621335
Upstream geneTusc3, LOC100038974, LOC632066
Downstream geneLOC434304, Msr1, EG621431, LOC100039072, LOC666959, EG632166, Fgf20, 2900075B16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212C15.bB6Ng01-212C15.g
ACCGA030031GA030032
length1,2281,147
definitionB6Ng01-212C15.b B6Ng01-212C15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacaactcacttaaagaaatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaccaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcga
cgctggagatagaaaccctaggaaagaaatctggaaccatagatgccagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactcaaaacatccaggaaatccaggacacaatgagaagacca
aacctacggataataggagtggatgagaatgaagattttcaactcaaagg
accagcaaacatcttcaacaaaattattgaagaaaacttcccaaatctaa
agaaagagatgcccatgaacatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacaccaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taacatataaaggcaagcctatcagaattacaccagatttttcaccagag
actatgaaagccagaagagcctggtcagatgttatacagacactaagaga
acataaatgccagcccaggctactatacccagccaaactctcaattacca
tagatggagaaaccaaagtattccacgacaaaactaaattcacccattat
ctctccacgaatccagcccttcaaaggataataacagaaaaaaacaatac
aaggacgggaaccacgccctagaaaaacagagatatccatcaacaaacct
aaaagagacaccacagaacagaatgccactttaacacaaaatacagaagc
acattacctttccttatatcctctatatcatgactcatttccccaataaa
aagacatagactaacgactgcctacacaacagaccacattctgctgctac
aggaacccatctcagaaagaccgacctacctcaggtaagcctgaacattc
aagcaatgtctcggaaaaaacaagcctg
gaattcccattgaacaccgctggccacatcactcattttcaggaatgagt
tctcactacagaaaatgttcaggtgctgctttgacctcaaaggtctgaga
atgaattaacgcattctttcaggaagcacacacttgaaaagtgggatgta
ctcaaaatgatccattcattcatttgtttgcttggctccatcctcctaac
aacacacacacacatccctatgtatttaaaaatggagtgatcactttttt
tccccattttgaacactagttctgatgatggagtctattcatctattccc
acaaaaactcaggattcttaattttcttcctactaaagattcacatatct
gctttccttttaaaatgatttaaacacatacagtgtatacatatattaaa
ggaattatattcattcctgggagaaatgaagtgaacattacagttactag
aaacagaagaaatataagactatgagaaaatgtatttccagaaggccttc
aacattgctttgctggagctggatgagccctcccttgggatctagatttg
tgtaagagaccaactcactgtggcctggggaaagctgccagggacatctt
caaccaaggatataggtttggcatagtcaaaacagatctaaaaccaaatc
atgtagtgaagtgaattttctacttcaggctctgttttcactgatacagg
ggaacaaaagcatctggtttcctagagactaagtacaagatctggaaata
tggacttagcttcatccaaaaatgaaacacagaatcttagggcagaaatt
tcttgagagagtaaattggctaaatggttgaaacagactcttgataccat
atttgtcccaaacacaagggaagatgaacaggaaactaaatttgtctgtg
cagactaattttatgtcaacttgaccaagctagagtcatttgagaggaag
gaacgctaattgagaaatgcctccataaatttgggctgtagggaagcctt
caggcattttcttaatgtatgatgtgagagacccagttcgtgtgggtagc
atatccctagtgtagtcctaagttctataggaaagcagctagcaagcaag
actgggaacagcagtaagcagcaccctcccacgccttcaatcagctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_40396430_40397596
seq2: B6Ng01-212C15.g_63_1209 (reverse)

seq1  GAGCTGATGTGGAGGCCGTGGGAGGGTGCTGCTTACTGGCTTGTTCCCCA  50
      |||||||| || ||| ||||||||||||||||||||||   |||||||  
seq2  GAGCTGAT-TGAAGG-CGTGGGAGGGTGCTGCTTACTG--CTGTTCCC--  44

seq1  TGTCTTGCTTGCTTAGCCTGCTTTCTTATAGAACCTAGGACTACCAACTA  100
       ||||||||||| ||| |||||||| |||||||| |||||||||  ||| 
seq2  AGTCTTGCTTGC-TAG-CTGCTTTCCTATAGAACTTAGGACTAC--ACT-  89

seq1  AGGGATATGCCTACCCACAACGAACTGGGTTCTCTCACATCAATTACCAA  150
      ||||||||| |||||||| |||||||||| ||||||||||||  |||  |
seq2  AGGGATATG-CTACCCAC-ACGAACTGGG-TCTCTCACATCA--TAC--A  132

seq1  TTAAGAAAATGCCCTGAAGGCTTCCCTACAGCCCAAATTTATGGAGGCAT  200
      ||||||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  TTAAGAAAATG-CCTGAAGGCTTCCCTACAGCCCAAATTTATGGAGGCA-  180

seq1  TTTCTCAATTAGCGTTCCTTCCTCTCAAATGACTCTAGCTTGGTCAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAATTAGCGTTCCTTCCTCTCAAATGACTCTAGCTTGGTCAAGTT  230

seq1  GACATAAAATTAGTCTGCACAGACAAATTTAGTTTCCTGTTCATCTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAAAATTAGTCTGCACAGACAAATTTAGTTTCCTGTTCATCTTCCC  280

seq1  TTGTGTTTGGGACAAATATGGTATCAAGAGTCTGTTTCAACCATTTAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTGGGACAAATATGGTATCAAGAGTCTGTTTCAACCATTTAGCC  330

seq1  AATTTACTCTCTCAAGAAATTTCTGCCCTAAGATTCTGTGTTTCATTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACTCTCTCAAGAAATTTCTGCCCTAAGATTCTGTGTTTCATTTTT  380

seq1  GGATGAAGCTAAGTCCATATTTCCAGATCTTGTACTTAGTCTCTAGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAAGCTAAGTCCATATTTCCAGATCTTGTACTTAGTCTCTAGGAAA  430

seq1  CCAGATGCTTTTGTTCCCCTGTATCAGTGAAAACAGAGCCTGAAGTAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGCTTTTGTTCCCCTGTATCAGTGAAAACAGAGCCTGAAGTAGAA  480

seq1  AATTCACTTCACTACATGATTTGGTTTTAGATCTGTTTTGACTATGCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACTTCACTACATGATTTGGTTTTAGATCTGTTTTGACTATGCCAA  530

seq1  ACCTATATCCTTGGTTGAAGATGTCCCTGGCAGCTTTCCCCAGGCCACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATATCCTTGGTTGAAGATGTCCCTGGCAGCTTTCCCCAGGCCACAG  580

seq1  TGAGTTGGTCTCTTACACAAATCTAGATCCCAAGGGAGGGCTCATCCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGGTCTCTTACACAAATCTAGATCCCAAGGGAGGGCTCATCCAGC  630

seq1  TCCAGCAAAGCAATGTTGAAGGCCTTCTGGAAATACATTTTCTCATAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCAAAGCAATGTTGAAGGCCTTCTGGAAATACATTTTCTCATAGTC  680

seq1  TTATATTTCTTCTGTTTCTAGTAACTGTAATGTTCACTTCATTTCTCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTCTTCTGTTTCTAGTAACTGTAATGTTCACTTCATTTCTCCCA  730

seq1  GGAATGAATATAATTCCTTTAATATATGTATACACTGTATGTGTTTAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAATATAATTCCTTTAATATATGTATACACTGTATGTGTTTAAAT  780

seq1  CATTTTAAAAGGAAAGCAGATATGTGAATCTTTAGTAGGAAGAAAATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAAAGGAAAGCAGATATGTGAATCTTTAGTAGGAAGAAAATTAA  830

seq1  GAATCCTGAGTTTTTGTGGGAATAGATGAATAGACTCCATCATCAGAACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTGAGTTTTTGTGGGAATAGATGAATAGACTCCATCATCAGAACT  880

seq1  AGTGTTCAAAATGGGGAAAAAAAGTGATCACTCCATTTTTAAATACATAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCAAAATGGGGAAAAAAAGTGATCACTCCATTTTTAAATACATAG  930

seq1  GGATGTGTGTGTGTGTTGTTAGGAGGATGGAGCCAAGCAAACAAATGAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGTGTGTGTGTTGTTAGGAGGATGGAGCCAAGCAAACAAATGAAT  980

seq1  GAATGGATCATTTTGAGTACATCCCACTTTTCAAGTGTGTGCTTCCTGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGATCATTTTGAGTACATCCCACTTTTCAAGTGTGTGCTTCCTGAA  1030

seq1  AGAATGCGTTAATTCATTCTCAGACCTTTGAGGTCAAAGCAGCACCTGAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCGTTAATTCATTCTCAGACCTTTGAGGTCAAAGCAGCACCTGAA  1080

seq1  CATTTTCTGTAGTGAGAACTCATTCCTGAAAATGAGTGATGTGGCCAGCG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTGTAGTGAGAACTCATTCCTGAAAATGAGTGATGTGGCCAGCG  1130

seq1  GTGTTCAATGGGAATTC  1167
      |||||||||||||||||
seq2  GTGTTCAATGGGAATTC  1147