BAC Information

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BAC

Clone NameB6Ng01-212I19
Chromosome8 (Build37)
Map Location 7,593,402 - 7,689,827
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665127, EG546032
Downstream geneLOC100039836, Efnb2, 9430010O03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212I19.bB6Ng01-212I19.g
ACCGA030316GA030317
length7351,189
definitionB6Ng01-212I19.b B6Ng01-212I19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,593,402 - 7,594,136)(7,688,626 - 7,689,827)
sequence
gaattcctctttccttgtttgtacaatattttagataatttatttttttc
ctatgtttcctgaggctctcagctttagcttcagtttacctgcagttgca
ccaaattttattcattcttttacatttagaattttcttgagttatttgta
gagtaaatatattaagtatttgtgggtttttttttttgcatcatcacatc
atgaaagttttctcattaaacatatatgtagcataatatacaaatgagac
tcaggatgaacgaagaccagagtgtagacgttttgccccttcttagaatt
gggagcggaacacccatggagggagttgcagagacgaagtttggagctaa
gacaaaggggtggaccgtctagagactgccatatctggggatccatcctg
taatcagcctccaaacgctgacaccattgcatacactagtgggattttgc
tgaaaggaccctgatatagctgcctcttatgaggctatgccagggcctag
caaacactaaagtggatgctcacagtcagctgttggatggatcacagggc
ccccaatgaaggagctagagagagtacccaaggagctgaggggatctggg
tggaataacaatatgaactaaccagtacccctgagctcttgactctagct
gcatatgtatcagaggatggcctggtcagccatcagtggaaagagaggcc
cattggtcatgcagactttatatgcctcagtgcag

gaattccaggacagccagggctatacagagaaaccctgtctcaaaaaaaa
aaaaaaaaaaaaaaaggaaagttgaagaaaataaagaaacagagggtccc
tttcctcagagatattttctaaattgttggcagtacagtattagcaatag
gacaatctagaaggtatctaaagaggtcctggtgtgactaacactgtcct
aggataaacatatttagaaaggggcccattttagcatagctcatgagagg
agtgctcctaatcatgaaaaaccattatactctctggacttttaaataat
ttaaaactgagaatctgaaccaattttcacaaacctccaaaaaggtcatg
gtactttcctgggtacttgttattgtacaaattcttgttaatttgttcca
tttgcatacttaggtatgtaaaccttaactgaaccattttggtatgagaa
ttattccaatattctggacatttacattttataatctttagctatcacat
ctctagaaagtacctgaaaattgcctctggtagtattatcaaagcaggaa
aggggagattaacagagaagagaaggaggtcaatgctagttatgacttca
tggaatactgtgtccatactcatgaatatgtgttgctgtggagagagagg
tgataaatccacagagagaggagttatgcactcacaaaagattctgctcg
gtgctggggaagaaggcgagcacagactttgtatccatggctgatatgtg
gttggctcccagctctactgaatgcttatctgcattcagtttagttagaa
tgagggtaagctgggagaaacagcaaggtggcctttctaataggtcagaa
tatacatattttgtgaatttataaaaatattaaggttttaaaactttttg
atactataacataatcacaatatttatcttttcattttcctcccacatac
ccctccccactctccttcatatctatagcctctttattcataatgtagag
gtgcaatatgtgaatatacataccacattcctaatatacctggtcagttg
cataatgagcaaagcagagacttgacagaatgctacaaaatagccacttt
catataaaatagcaaggttatttgatattgattatgtggcctatgtgctg
tatagaatgaaaacggcattaatagttaacccgtacata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_7593402_7594136
seq2: B6Ng01-212I19.b_45_779

seq1  GAATTCCTCTTTCCTTGTTTGTACAATATTTTAGATAATTTATTTTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTTCCTTGTTTGTACAATATTTTAGATAATTTATTTTTTTC  50

seq1  CTATGTTTCCTGAGGCTCTCAGCTTTAGCTTCAGTTTACCTGCAGTTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTTCCTGAGGCTCTCAGCTTTAGCTTCAGTTTACCTGCAGTTGCA  100

seq1  CCAAATTTTATTCATTCTTTTACATTTAGAATTTTCTTGAGTTATTTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTTTATTCATTCTTTTACATTTAGAATTTTCTTGAGTTATTTGTA  150

seq1  GAGTAAATATATTAAGTATTTGTGGGTTTTTTTTTTTGCATCATCACATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAATATATTAAGTATTTGTGGGTTTTTTTTTTTGCATCATCACATC  200

seq1  ATGAAAGTTTTCTCATTAAACATATATGTAGCATAATATACAAATGAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGTTTTCTCATTAAACATATATGTAGCATAATATACAAATGAGAC  250

seq1  TCAGGATGAACGAAGACCAGAGTGTAGACGTTTTGCCCCTTCTTAGAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATGAACGAAGACCAGAGTGTAGACGTTTTGCCCCTTCTTAGAATT  300

seq1  GGGAGCGGAACACCCATGGAGGGAGTTGCAGAGACGAAGTTTGGAGCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCGGAACACCCATGGAGGGAGTTGCAGAGACGAAGTTTGGAGCTAA  350

seq1  GACAAAGGGGTGGACCGTCTAGAGACTGCCATATCTGGGGATCCATCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGGGGTGGACCGTCTAGAGACTGCCATATCTGGGGATCCATCCTG  400

seq1  TAATCAGCCTCCAAACGCTGACACCATTGCATACACTAGTGGGATTTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGCCTCCAAACGCTGACACCATTGCATACACTAGTGGGATTTTGC  450

seq1  TGAAAGGACCCTGATATAGCTGCCTCTTATGAGGCTATGCCAGGGCCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGACCCTGATATAGCTGCCTCTTATGAGGCTATGCCAGGGCCTAG  500

seq1  CAAACACTAAAGTGGATGCTCACAGTCAGCTGTTGGATGGATCACAGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACTAAAGTGGATGCTCACAGTCAGCTGTTGGATGGATCACAGGGC  550

seq1  CCCCAATGAAGGAGCTAGAGAGAGTACCCAAGGAGCTGAGGGGATCTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAATGAAGGAGCTAGAGAGAGTACCCAAGGAGCTGAGGGGATCTGGG  600

seq1  TGGAATAACAATATGAACTAACCAGTACCCCTGAGCTCTTGACTCTAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAACAATATGAACTAACCAGTACCCCTGAGCTCTTGACTCTAGCT  650

seq1  GCATATGTATCAGAGGATGGCCTGGTCAGCCATCAGTGGAAAGAGAGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGTATCAGAGGATGGCCTGGTCAGCCATCAGTGGAAAGAGAGGCC  700

seq1  CATTGGTCATGCAGACTTTATATGCCTCAGTGCAG  735
      |||||||||||||||||||||||||||||||||||
seq2  CATTGGTCATGCAGACTTTATATGCCTCAGTGCAG  735


seq1: chr8_7688626_7689827
seq2: B6Ng01-212I19.g_63_1251 (reverse)

seq1  TATGTACAGTTTAACTATATTATTGCACTTTTTTCATTCTATACAGCACA  50
      ||||||| | |||||  ||||| ||  |  ||||||||||||||||||||
seq2  TATGTACGGGTTAAC--TATTAATG--CCGTTTTCATTCTATACAGCACA  46

seq1  TAG--CACATAATTCATTAATTCCAAAATAACCTTGCTA--TTATATGAA  96
      |||  ||||||| ||| ||  ||  ||||||||||||||  |||||||||
seq2  TAGGCCACATAA-TCAATA--TC--AAATAACCTTGCTATTTTATATGAA  91

seq1  AGTGGGCTATTTTGTAGCATACTGTCAAAGTCTCTGCCTTTGCCTCAATT  146
      ||| |||||||||||||||| ||||| ||||||||| ||||| ||| |||
seq2  AGT-GGCTATTTTGTAGCATTCTGTC-AAGTCTCTG-CTTTG-CTC-ATT  136

seq1  ATGCAACTGACCAGGTTATATTTAGGAATGT-GTATGTATATTCACATA-  194
      ||||||||||||||| |||| |||||||||| ||||||||||||||||| 
seq2  ATGCAACTGACCAGG-TATA-TTAGGAATGTGGTATGTATATTCACATAT  184

seq1  TGCACCTCTAACAATTAATGAATAAAGAGGCTATAGATATGAAGGAGAGT  244
      ||||||||| |||  | |||||||||||||||||||||||||||||||||
seq2  TGCACCTCT-ACA--TTATGAATAAAGAGGCTATAGATATGAAGGAGAGT  231

seq1  GGGGAGGGGTATGTGGGAGGAAAATGAAAAGATAAATATTGTGATTATGT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGGGTATGTGGGAGGAAAATGAAAAGATAAATATTGTGATTATGT  281

seq1  TATAGTATCAAAAAGTTTTAAAACCTTAATATTTTTATAAATTCACAAAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTATCAAAAAGTTTTAAAACCTTAATATTTTTATAAATTCACAAAA  331

seq1  TATGTATATTCTGACCTATTAGAAAGGCCACCTTGCTGTTTCTCCCAGCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATATTCTGACCTATTAGAAAGGCCACCTTGCTGTTTCTCCCAGCT  381

seq1  TACCCTCATTCTAACTAAACTGAATGCAGATAAGCATTCAGTAGAGCTGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTCATTCTAACTAAACTGAATGCAGATAAGCATTCAGTAGAGCTGG  431

seq1  GAGCCAACCACATATCAGCCATGGATACAAAGTCTGTGCTCGCCTTCTTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAACCACATATCAGCCATGGATACAAAGTCTGTGCTCGCCTTCTTC  481

seq1  CCCAGCACCGAGCAGAATCTTTTGTGAGTGCATAACTCCTCTCTCTGTGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACCGAGCAGAATCTTTTGTGAGTGCATAACTCCTCTCTCTGTGG  531

seq1  ATTTATCACCTCTCTCTCCACAGCAACACATATTCATGAGTATGGACACA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCACCTCTCTCTCCACAGCAACACATATTCATGAGTATGGACACA  581

seq1  GTATTCCATGAAGTCATAACTAGCATTGACCTCCTTCTCTTCTCTGTTAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCCATGAAGTCATAACTAGCATTGACCTCCTTCTCTTCTCTGTTAA  631

seq1  TCTCCCCTTTCCTGCTTTGATAATACTACCAGAGGCAATTTTCAGGTACT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCTTTCCTGCTTTGATAATACTACCAGAGGCAATTTTCAGGTACT  681

seq1  TTCTAGAGATGTGATAGCTAAAGATTATAAAATGTAAATGTCCAGAATAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAGATGTGATAGCTAAAGATTATAAAATGTAAATGTCCAGAATAT  731

seq1  TGGAATAATTCTCATACCAAAATGGTTCAGTTAAGGTTTACATACCTAAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAATTCTCATACCAAAATGGTTCAGTTAAGGTTTACATACCTAAG  781

seq1  TATGCAAATGGAACAAATTAACAAGAATTTGTACAATAACAAGTACCCAG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAAATGGAACAAATTAACAAGAATTTGTACAATAACAAGTACCCAG  831

seq1  GAAAGTACCATGACCTTTTTGGAGGTTTGTGAAAATTGGTTCAGATTCTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTACCATGACCTTTTTGGAGGTTTGTGAAAATTGGTTCAGATTCTC  881

seq1  AGTTTTAAATTATTTAAAAGTCCAGAGAGTATAATGGTTTTTCATGATTA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAAATTATTTAAAAGTCCAGAGAGTATAATGGTTTTTCATGATTA  931

seq1  GGAGCACTCCTCTCATGAGCTATGCTAAAATGGGCCCCTTTCTAAATATG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCACTCCTCTCATGAGCTATGCTAAAATGGGCCCCTTTCTAAATATG  981

seq1  TTTATCCTAGGACAGTGTTAGTCACACCAGGACCTCTTTAGATACCTTCT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCTAGGACAGTGTTAGTCACACCAGGACCTCTTTAGATACCTTCT  1031

seq1  AGATTGTCCTATTGCTAATACTGTACTGCCAACAATTTAGAAAATATCTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGTCCTATTGCTAATACTGTACTGCCAACAATTTAGAAAATATCTC  1081

seq1  TGAGGAAAGGGACCCTCTGTTTCTTTATTTTCTTCAACTTTCCTTTTTTT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAAGGGACCCTCTGTTTCTTTATTTTCTTCAACTTTCCTTTTTTT  1131

seq1  TTTTTTTTTTTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCC  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCC  1181

seq1  TGGAATTC  1202
      ||||||||
seq2  TGGAATTC  1189


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