BAC Information

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BAC

Clone NameB6Ng01-214D24
Chromosome8 (Build37)
Map Location 84,873,187 - 85,029,498
singlet/doubletdoublet
Overlap geneIl15
Upstream geneInpp4b, LOC671182
Downstream geneEG666564, LOC675800, EG666289, Zfp330, Rnf150, LOC100039688, Tbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214D24.bB6Ng01-214D24.g
ACCGA031548GA031549
length950743
definitionB6Ng01-214D24.b B6Ng01-214D24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,873,187 - 84,874,134)(85,028,757 - 85,029,498)
sequence
gaattcaatgcggtattttaatagttcaactataaacacagaccagaagt
ttacttctcagacaaactgtggctctaaagcaacgaacagcccttgtact
tgaatgaattgttttacaactcctggctatccatgctcactcttcaggga
aggagaacctgtcagttctgaaaacgagtttagctgaatgcatgtggagg
ttacaagttaatgattaactagtaaagtacagggctgttctctaacaact
aagacccttacatgccctctctccatttctccaacacacagaccccacag
aacctctactgggatggcttttgattgttgccttcttgtctgaatttcca
aacatctcctgcatcctattttcctgcactttaacctccacactgaagct
aaacattaatctctccacaaacctattttcggtaatttagatatctcagc
agagattgaaataggaaagatttgtctgaaaatttcttataagccctctc
ctcctaaagatctcttttgtgtctccaccattaccttcgtatttttataa
aactattactgtaagaaccaaacaaggaaaacctggaatgggttcctaca
tgttcttgttcctgcagactgatagcaagacccctcattcttgataccaa
gccctactgatagtgatacccaagtttcttgtatattaggggagaatact
tgctcatattttaaaacatctttaaattacccatactaacaaattcagta
taaatgctatagaaatgaatacactaatggtcaagaaaaaataacaaaga
aaaaaatctgtgcatggccagtgtgctagtttgaatatgcttggcctagg
gagtggcactattagtggctgtgggcttgttgggaataggtgtggcctaa
tgggaagaagtgtggtcactgtggggcgtgggctctagatctctatccta

gaattcagctcagaagaagggtcctgaccattctgtgatgacatcatctc
tctgcctttatgtctgtgatggtagatgacgacatcatctttatactttt
atgtttgtgatattaatgcttttctttttgtttttgctaattcatcagtt
tgaaacttatggtttctcaatgtaatcaaattaaatagctttgaatatat
aggtattcacctttgagaacttcagattacattttctatactctagtcac
tattaactattttatatctttatttttagctgtttctatgtttaggactg
gggcatttaatttatgcatatatgtgcataaaggtatacatatataaata
tacgtggaaattgtcttctctagagtctgttgcacttgattatacttgat
tggtttctcttaacagtgtatggattttttaaaaattagagtggttgtgt
ggtctcatcaactacatttagctttgaagatgtaaagaatgtttttatta
ttcatttttattatttttttaaagtttacatatgatggttttttttaagt
tataatgatgggtttcattattgcctttgcacaactgtttcccaaataca
taataggtgtactcagagactaataaattctttttcattacttccatgac
ccttgacccaaagagggatggttactgtcttagtcagggtttctattcct
gcacaaacatcatgatcaaagaaacaagttggggaggaaaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_84873187_84874134
seq2: B6Ng01-214D24.b_47_996

seq1  GAATTCAATGCGGTATTTTAATAGTTCAACTATAAACACAGACCAGAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCGGTATTTTAATAGTTCAACTATAAACACAGACCAGAAGT  50

seq1  TTACTTCTCAGACAAACTGTGGCTCTAAAGCAACGAACAGCCCTTGTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTCTCAGACAAACTGTGGCTCTAAAGCAACGAACAGCCCTTGTACT  100

seq1  TGAATGAATTGTTTTACAACTCCTGGCTATCCATGCTCACTCTTCAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAATTGTTTTACAACTCCTGGCTATCCATGCTCACTCTTCAGGGA  150

seq1  AGGAGAACCTGTCAGTTCTGAAAACGAGTTTAGCTGAATGCATGTGGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAACCTGTCAGTTCTGAAAACGAGTTTAGCTGAATGCATGTGGAGG  200

seq1  TTACAAGTTAATGATTAACTAGTAAAGTACAGGGCTGTTCTCTAACAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGTTAATGATTAACTAGTAAAGTACAGGGCTGTTCTCTAACAACT  250

seq1  AAGACCCTTACATGCCCTCTCTCCATTTCTCCAACACACAGACCCCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCTTACATGCCCTCTCTCCATTTCTCCAACACACAGACCCCACAG  300

seq1  AACCTCTACTGGGATGGCTTTTGATTGTTGCCTTCTTGTCTGAATTTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTACTGGGATGGCTTTTGATTGTTGCCTTCTTGTCTGAATTTCCA  350

seq1  AACATCTCCTGCATCCTATTTTCCTGCACTTTAACCTCCACACTGAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTCCTGCATCCTATTTTCCTGCACTTTAACCTCCACACTGAAGCT  400

seq1  AAACATTAATCTCTCCACAAACCTATTTTCGGTAATTTAGATATCTCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTAATCTCTCCACAAACCTATTTTCGGTAATTTAGATATCTCAGC  450

seq1  AGAGATTGAAATAGGAAAGATTTGTCTGAAAATTTCTTATAAGCCCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTGAAATAGGAAAGATTTGTCTGAAAATTTCTTATAAGCCCTCTC  500

seq1  CTCCTAAAGATCTCTTTTGTGTCTCCACCATTACCTTCGTATTTTTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAAAGATCTCTTTTGTGTCTCCACCATTACCTTCGTATTTTTATAA  550

seq1  AACTATTACTGTAAGAACCAAACAAGGAAAACCTGGAATGGGTTCCTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTACTGTAAGAACCAAACAAGGAAAACCTGGAATGGGTTCCTACA  600

seq1  TGTTCTTGTTCCTGCAGACTGATAGCAAGACCCCTCATTCTTGATACCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTGTTCCTGCAGACTGATAGCAAGACCCCTCATTCTTGATACCAA  650

seq1  GCCCTACTGATAGTGATACCCAAGTTTCTTGTATATTAGGGGAGAATACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTACTGATAGTGATACCCAAGTTTCTTGTATATTAGGGGAGAATACT  700

seq1  TGCTCATATTTTAAAACATCTTTAAATTACCCATACTAACAAATTCAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATATTTTAAAACATCTTTAAATTACCCATACTAACAAATTCAGTA  750

seq1  TAAATGCTATAGAAATGAATACACTAATGGTCAAGAAAAAATAACAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCTATAGAAATGAATACACTAATGGTCAAGAAAAAATAACAAAGA  800

seq1  AAAAAATCTGTGCATGGCCAGTGTGCTAGTTTGAATATGCTTGGCCTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCTGTGCATGGCCAGTGTGCTAGTTTGAATATGCTTGGCCTAGG  850

seq1  GAGTGGCACTATTAGTGGCTGTGGGCTTGTT-GGAATAGGTGTGGCCTTA  899
      ||||||||||||||||||||||||||||||| |||||||||||||||| |
seq2  GAGTGGCACTATTAGTGGCTGTGGGCTTGTTGGGAATAGGTGTGGCCTAA  900

seq1  TTGGAAGAAGTGT-GTCACTGT-GGGCGTGGGCTTTAAGATCTTCATCCT  947
      | ||||||||||| |||||||| ||||||||||| | ||||||  |||||
seq2  TGGGAAGAAGTGTGGTCACTGTGGGGCGTGGGCTCT-AGATCTCTATCCT  949

seq1  A  948
      |
seq2  A  950

seq1: chr8_85028757_85029498
seq2: B6Ng01-214D24.g_66_808 (reverse)

seq1  CCCTTTCCTCCCCAACTTGTTTC-TTGGTCATGATGTTTGTGCAGGAATA  49
      ||||||||||||||||||||||| ||| ||||||||||||||||||||||
seq2  CCCTTTCCTCCCCAACTTGTTTCTTTGATCATGATGTTTGTGCAGGAATA  50

seq1  GAAACCCTGACTAAGACAGTAACCATCCCTCTTTGGGTCAAGGGTCATGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTGACTAAGACAGTAACCATCCCTCTTTGGGTCAAGGGTCATGG  100

seq1  AAGTAATGAAAAAGAATTTATTAGTCTCTGAGTACACCTATTATGTATTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATGAAAAAGAATTTATTAGTCTCTGAGTACACCTATTATGTATTT  150

seq1  GGGAAACAGTTGTGCAAAGGCAATAATGAAACCCATCATTATAACTTAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACAGTTGTGCAAAGGCAATAATGAAACCCATCATTATAACTTAAA  200

seq1  AAAAACCATCATATGTAAACTTTAAAAAAATAATAAAAATGAATAATAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCATCATATGTAAACTTTAAAAAAATAATAAAAATGAATAATAAA  250

seq1  AACATTCTTTACATCTTCAAAGCTAAATGTAGTTGATGAGACCACACAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCTTTACATCTTCAAAGCTAAATGTAGTTGATGAGACCACACAAC  300

seq1  CACTCTAATTTTTAAAAAATCCATACACTGTTAAGAGAAACCAATCAAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTAATTTTTAAAAAATCCATACACTGTTAAGAGAAACCAATCAAGT  350

seq1  ATAATCAAGTGCAACAGACTCTAGAGAAGACAATTTCCACGTATATTTAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAAGTGCAACAGACTCTAGAGAAGACAATTTCCACGTATATTTAT  400

seq1  ATATGTATACCTTTATGCACATATATGCATAAATTAAATGCCCCAGTCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTATACCTTTATGCACATATATGCATAAATTAAATGCCCCAGTCCT  450

seq1  AAACATAGAAACAGCTAAAAATAAAGATATAAAATAGTTAATAGTGACTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGAAACAGCTAAAAATAAAGATATAAAATAGTTAATAGTGACTA  500

seq1  GAGTATAGAAAATGTAATCTGAAGTTCTCAAAGGTGAATACCTATATATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATAGAAAATGTAATCTGAAGTTCTCAAAGGTGAATACCTATATATT  550

seq1  CAAAGCTATTTAATTTGATTACATTGAGAAACCATAAGTTTCAAACTGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTATTTAATTTGATTACATTGAGAAACCATAAGTTTCAAACTGAT  600

seq1  GAATTAGCAAAAACAAAAAGAAAAGCATTAATATCACAAACATAAAAGTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGCAAAAACAAAAAGAAAAGCATTAATATCACAAACATAAAAGTA  650

seq1  TAAAGATGATGTCGTCATCTACCATCACAGACATAAAGGCAGAGAGATGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATGATGTCGTCATCTACCATCACAGACATAAAGGCAGAGAGATGA  700

seq1  TGTCATCACAGAATGGTCAGGACCCTTCTTCTGAGCTGAATTC  742
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCACAGAATGGTCAGGACCCTTCTTCTGAGCTGAATTC  743