BAC Information

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BAC

Clone NameB6Ng01-214O09
Chromosome8 (Build37)
Map Location 7,550,946 - 7,647,422
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665127, EG546032
Downstream geneLOC100039836, Efnb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214O09.bB6Ng01-214O09.g
ACCGA032023GA032024
length1,0991,054
definitionB6Ng01-214O09.b B6Ng01-214O09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,550,946 - 7,552,041)(7,646,371 - 7,647,422)
sequence
gaattctctgctaaagacatgtttggccagagattacaatccaaatggca
aaattgtactcaaactcttagttagaaatggtcagggggaaacatcctct
tggagacagggaaggaagaatgggattaggaactgtaggagaggggatcc
agaggtgggcaatggctggaatgtaaaaaactagaagtaatacaaaaagt
tctattgtgttgttctatatggaatatatccatggtaatcaatatattga
attacagaacatttcattataatcttaattaattcattgatttcctggaa
ctgtgattggttgagaaaacatcaacgaggctagagtaatttctacacat
aagtctttcaaaagctacctgaaccatataatcataggaagacactgtct
tagtttgctaggcatctatcagatatttaccctaaaaatagtggttatta
ctagagacaatagaatgcatgtggatttctgaatgttaatatactcatgt
gttaatgtggcatgctttcttagaaaatgatggttgactgtttcatggtc
atctaaagacaaggcaatacatcataattttttaccaacttcaatttaaa
atagctacataatagtctatattattataaagtatctcattgttaggtgg
cccttaggacttaatgtctaataggaggtgccacatacaccaatctgaaa
caccaagggaacattagctgacatgcataaacttacagacacttcataaa
acaaatcagctgcaagaaaatattacatattgaggcaagttgaggtcaca
atttatgtttttcaaagtacaactagaaaatgggggcccaagaaatttgg
tgagaatcagaaaggatggagtggaaagagagagagagagagagagagag
agagagagagagagagagatagaaaaccaaccaacaaccaaaatgatcac
cagtatccataaataaagtaacaataaaactaaaataaattaatcttaaa
atcatgtctagagaactggcataatcgggaatctatcccataatcagctt
tcaaacggctggcacaattgcaatcactagcaaggatttttggctgaaa

gaattcaatatgttggcctctccaaatacaccattatttacatggctcat
tcttgggacatggggctctgagggaaaatatagtttcccaccctccttat
attctggtcacatccctaggtgactatttgtacaaactttttctcagtgt
tggtactaatttgctaactaattagaacatatccaaagaagttacttctt
ataatggtttcctatattcaatcactgttattacacatctcttcatcaca
tagaacatgtttaaagtcttcatggttatcttttacatattttatgcaga
ttacttttatatttatggatggggatcacttcttcccccaggtggctgta
aaattgcaatttcactttgacatgatacaaattggtttagagaaaacaaa
taattctaaagtctttagaagctgaaagatgtagttggagcatagtaaaa
acataaataaatctagaagatggtgggttttatctcatcctggatcatgc
ttctgaatttagtttactgatttttatccaggaatgatttggggcttgtg
taaagaaatggaaactaagaaccaccataaaatgagaataagtttgcaat
ctcttaaaatgtgtatttgtacagaccatgaaatacaaatattttgttca
agaaaaatgtcctccagacgttgttctgaatatcagaccaaaagtaaaag
attttaagaaggacgtaaatattcttatttgcttctgttattagctactc
cacaaatatggaatgttggaacattgaaaaaaatctctggatttaagacc
atgatcaacaatagtgaaattgtattgaaagttaaggtgtatacatagaa
agtataattcaacagttaaataaactttaacatactataaccctgcaact
gtcttgccaacaaaatgagacagtagtatcccagaagatttttttttgcc
tcactgtaaagctatttgcaattcttgtctgttataggtgtcaattctcc
tatcaatacccctgtgttaaatatttaatttataagctgtcctaatcaat
gtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_7550946_7552041
seq2: B6Ng01-214O09.b_51_1149

seq1  GAATTCTCTGCTAAAGACATGTTTGGCCAGAGATTACAATCCAAATGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCTAAAGACATGTTTGGCCAGAGATTACAATCCAAATGGCA  50

seq1  AAATTGTACTCAAACTCTTAGTTAGAAATGGTCAGGGGGAAACATCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTACTCAAACTCTTAGTTAGAAATGGTCAGGGGGAAACATCCTCT  100

seq1  TGGAGACAGGGAAGGAAGAATGGGATTAGGAACTGTAGGAGAGGGGATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACAGGGAAGGAAGAATGGGATTAGGAACTGTAGGAGAGGGGATCC  150

seq1  AGAGGTGGGCAATGGCTGGAATGTAAAAAACTAGAAGTAATACAAAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGGGCAATGGCTGGAATGTAAAAAACTAGAAGTAATACAAAAAGT  200

seq1  TCTATTGTGTTGTTCTATATGGAATATATCCATGGTAATCAATATATTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGTGTTGTTCTATATGGAATATATCCATGGTAATCAATATATTGA  250

seq1  ATTACAGAACATTTCATTATAATCTTAATTAATTCATTGATTTCCTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGAACATTTCATTATAATCTTAATTAATTCATTGATTTCCTGGAA  300

seq1  CTGTGATTGGTTGAGAAAACATCAACGAGGCTAGAGTAATTTCTACACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATTGGTTGAGAAAACATCAACGAGGCTAGAGTAATTTCTACACAT  350

seq1  AAGTCTTTCAAAAGCTACCTGAACCATATAATCATAGGAAGACACTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTTCAAAAGCTACCTGAACCATATAATCATAGGAAGACACTGTCT  400

seq1  TAGTTTGCTAGGCATCTATCAGATATTTACCCTAAAAATAGTGGTTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGCTAGGCATCTATCAGATATTTACCCTAAAAATAGTGGTTATTA  450

seq1  CTAGAGACAATAGAATGCATGTGGATTTCTGAATGTTAATATACTCATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGACAATAGAATGCATGTGGATTTCTGAATGTTAATATACTCATGT  500

seq1  GTTAATGTGGCATGCTTTCTTAGAAAATGATGGTTGACTGTTTCATGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGTGGCATGCTTTCTTAGAAAATGATGGTTGACTGTTTCATGGTC  550

seq1  ATCTAAAGACAAGGCAATACATCATAATTTTTTACCAACTTCAATTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAGACAAGGCAATACATCATAATTTTTTACCAACTTCAATTTAAA  600

seq1  ATAGCTACATAATAGTCTATATTATTATAAAGTATCTCATTGTTAGGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTACATAATAGTCTATATTATTATAAAGTATCTCATTGTTAGGTGG  650

seq1  CCCTTAGGACTTAATGTCTAATAGGAGGTGCCACATACACCAATCTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAGGACTTAATGTCTAATAGGAGGTGCCACATACACCAATCTGAAA  700

seq1  CACCAAGGGAACATTAGCTGACATGCATAAACTTACAGACACTTCATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGGGAACATTAGCTGACATGCATAAACTTACAGACACTTCATAAA  750

seq1  ACAAATCAGCTGCAAGAAAATATTACATATTGAGGCAAGTTGAGGTCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCAGCTGCAAGAAAATATTACATATTGAGGCAAGTTGAGGTCACA  800

seq1  ATTTATGTTTTTCAAAGTACAACTAGAAAATGGGGGCCCAAGAAATTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTTTTTCAAAGTACAACTAGAAAATGGGGGCCCAAGAAATTTGG  850

seq1  TGAGAATCAGAAAGGATGGAGTGGAAAGAGAGAGAGAGAGAGAGAGAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATCAGAAAGGATGGAGTGGAAAGAGAGAGAGAGAGAGAGAGAGAG  900

seq1  AGAGAGAGAGAGAGAGAGAGAGAAAACCAACCAACCAACCAAAATGATCA  950
      ||||||||||||||||||| |||||||||||||| |||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGATAGAAAACCAACCAA-CAACCAAAATGATCA  949

seq1  CCAGTATCCATAAATAAAGTAACCAATAAAACT-AAATAAATTAATCTTT  999
      |||||||||||||||||||||| |||||||||| ||||||||||||| ||
seq2  CCAGTATCCATAAATAAAGTAA-CAATAAAACTAAAATAAATTAATC-TT  997

seq1  AAAATCATGTCTAGAG-ACTGCCAT-ATCCGGAATCTATCCCATAATCAG  1047
      |||||||||||||||| |||| ||| ||| ||||||||||||||||||||
seq2  AAAATCATGTCTAGAGAACTGGCATAATCGGGAATCTATCCCATAATCAG  1047

seq1  CTTCCAAAC-GCTGGCACCATTGCATACACTAGCAA-GATTTTT-GCTGA  1094
      ||| ||||| |||||||| ||||||  ||||||||| ||||||| |||||
seq2  CTTTCAAACGGCTGGCACAATTGCAATCACTAGCAAGGATTTTTGGCTGA  1097

seq1  AA  1096
      ||
seq2  AA  1099


seq1: chr8_7646371_7647422
seq2: B6Ng01-214O09.g_70_1123 (reverse)

seq1  TTACATTGAATAAGACAGC-TATAAA-TAAATATTTAACAACAGGGGTAT  48
      ||||||||| || |||||| |||||| |||||||||||| ||||||||||
seq2  TTACATTGATTAGGACAGCTTATAAATTAAATATTTAAC-ACAGGGGTAT  49

seq1  TGATAGGAGAATTGACACCTATAACAGAC-AGAATTGC-AATAGCTTTAC  96
      ||||||||||||||||||||||||||||| |||||||| |||||||||||
seq2  TGATAGGAGAATTGACACCTATAACAGACAAGAATTGCAAATAGCTTTAC  99

seq1  AGTGAGGCAAAAAAAAATCTTCTGGGATACTACTGTCTCATTTTTGTTGG  146
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGTGAGGCAAAAAAAAATCTTCTGGGATACTACTGTCTCA-TTTTGTTGG  148

seq1  CAAGACAGTTGCAGGGTTATAGTATGTTAAAGTTTATTTAACTGTTGAAT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAGTTGCAGGGTTATAGTATGTTAAAGTTTATTTAACTGTTGAAT  198

seq1  TATACTTTCTATGTATACACCTTAACTTTCAATACAATTTCACTATTGTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTCTATGTATACACCTTAACTTTCAATACAATTTCACTATTGTT  248

seq1  GATCATGGTCTTAAATCCAGAGATTTTTTTCAATGTTCCAACATTCCATA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGGTCTTAAATCCAGAGATTTTTTTCAATGTTCCAACATTCCATA  298

seq1  TTTGTGGAGTAGCTAATAACAGAAGCAAATAAGAATATTTACGTCCTTCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGAGTAGCTAATAACAGAAGCAAATAAGAATATTTACGTCCTTCT  348

seq1  TAAAATCTTTTACTTTTGGTCTGATATTCAGAACAACGTCTGGAGGACAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCTTTTACTTTTGGTCTGATATTCAGAACAACGTCTGGAGGACAT  398

seq1  TTTTCTTGAACAAAATATTTGTATTTCATGGTCTGTACAAATACACATTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGAACAAAATATTTGTATTTCATGGTCTGTACAAATACACATTT  448

seq1  TAAGAGATTGCAAACTTATTCTCATTTTATGGTGGTTCTTAGTTTCCATT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGATTGCAAACTTATTCTCATTTTATGGTGGTTCTTAGTTTCCATT  498

seq1  TCTTTACACAAGCCCCAAATCATTCCTGGATAAAAATCAGTAAACTAAAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACACAAGCCCCAAATCATTCCTGGATAAAAATCAGTAAACTAAAT  548

seq1  TCAGAAGCATGATCCAGGATGAGATAAAACCCACCATCTTCTAGATTTAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGCATGATCCAGGATGAGATAAAACCCACCATCTTCTAGATTTAT  598

seq1  TTATGTTTTTACTATGCTCCAACTACATCTTTCAGCTTCTAAAGACTTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTTTTACTATGCTCCAACTACATCTTTCAGCTTCTAAAGACTTTA  648

seq1  GAATTATTTGTTTTCTCTAAACCAATTTGTATCATGTCAAAGTGAAATTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATTTGTTTTCTCTAAACCAATTTGTATCATGTCAAAGTGAAATTG  698

seq1  CAATTTTACAGCCACCTGGGGGAAGAAGTGATCCCCATCCATAAATATAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTACAGCCACCTGGGGGAAGAAGTGATCCCCATCCATAAATATAA  748

seq1  AAGTAATCTGCATAAAATATGTAAAAGATAACCATGAAGACTTTAAACAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATCTGCATAAAATATGTAAAAGATAACCATGAAGACTTTAAACAT  798

seq1  GTTCTATGTGATGAAGAGATGTGTAATAACAGTGATTGAATATAGGAAAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATGTGATGAAGAGATGTGTAATAACAGTGATTGAATATAGGAAAC  848

seq1  CATTATAAGAAGTAACTTCTTTGGATATGTTCTAATTAGTTAGCAAATTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAAGAAGTAACTTCTTTGGATATGTTCTAATTAGTTAGCAAATTA  898

seq1  GTACCAACACTGAGAAAAAGTTTGTACAAATAGTCACCTAGGGATGTGAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAACACTGAGAAAAAGTTTGTACAAATAGTCACCTAGGGATGTGAC  948

seq1  CAGAATATAAGGAGGGTGGGAAACTATATTTTCCCTCAGAGCCCCATGTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATATAAGGAGGGTGGGAAACTATATTTTCCCTCAGAGCCCCATGTC  998

seq1  CCAAGAATGAGCCATGTAAATAATGGTGTATTTGGAGAGGCCAACATATT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAATGAGCCATGTAAATAATGGTGTATTTGGAGAGGCCAACATATT  1048

seq1  GAATTC  1052
      ||||||
seq2  GAATTC  1054


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