BAC Information

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BAC

Clone NameB6Ng01-216F06
Chromosome8 (Build37)
Map Location 71,884,190 - 72,074,153
singlet/doubletdoublet
Overlap geneLOC670593, EG665578, LOC622336
Upstream gene4732435N03Rik, Ints10, Lpl, LOC100041138, Slc18a1, Atp6v1b2, Lzts1, EG665540, D10627, LOC665553, D130040H23Rik, LOC665561
Downstream geneLOC100041482, LOC673968, AI449175, EG636741, 1200003I07Rik, D330038O06Rik, Atp13a1, Gmip, Edg4, Pbx4, Cilp2, BC028663, Ndufa13, Tssk6, Gatad2a, LOC665649, 9130404D08Rik, Sf4, Tm6sf2, Hapln4, Ncan, Rfxank, 2310073E15Rik, 2310045N01Rik, Mef2b, Tmem161a, Slc25a42, Armc6, Sfrs14, Homer3, Ddx49, Cope, Lass1, Upf1, Comp, Crtc1, Klhl26, Tmem59l, Crlf1, 2810428I15Rik, Uba52, Fkbp8, Ell
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216F06.bB6Ng01-216F06.g
ACCGA033049GA033050
length932156
definitionB6Ng01-216F06.b B6Ng01-216F06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,884,190 - 71,884,721)(72,073,998 - 72,074,153)
sequence
gaattctcagggatactctcagagaatctttttttgtttgtttgtttgtt
tttattaggtatttatttcatttacatttccaatgctataccaaaagtcc
cccacctgctcccccacccacccactccaacttcttggccctgtcgttcc
cctgtactgaggcagatgaagttagcacgaccaatgggcctctctttcca
ctgatggctgactaggccatcttttgatacatatgcagttagagacatga
gctctggggggtactgggtagttcatattgttgttcctcttatagggtcg
gagatccctttagctccttggctactttctctagctcctccattgggggc
cctgtgatccatccaatagctgactgtgagcatccacttctgtgtttact
aggccccagcatactctcacaagagacagctatatctgggtcctttcagc
aaaatcttgctagtgtatgcaatggtgtcagcgtttgaatcctgattatg
ggatggttccccgatacggcagtctctagatgggccatccttttttctca
gctccaaactgtgtctctgtaactccttccatgggtgctttgttcccaat
tctaagaaggggcaaagtgtccacactttggtcttcattcttcttgagtt
tcatgtgtttagcaaattgtatcttatatcttgggtattctaagtttctg
ggctaatatccacttatcagtgagtacatattgtgtgagttctttttgtg
attgtgttacctcactcaggatgatgccctccaggttcatccatttgcct
aggaatttcataaattcattcttattaatagctgagtagtactccattgt
gtaaatgtaccacatttttctgtatccatttcttctgttgaggggcatct
ggggttcttcccagcttcctggctattataaa
cagaaatttctccctctctaaggtgactctgaaagcctgggttgactagc
aacattggcaaatcctgaaggcctaccaggcttgggcgccagggtcccag
gaagtgagtgactcttgccttgggctgcagtagaattgttgggggtgggg
tgaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_71884190_71884721
seq2: B6Ng01-216F06.b_44_575

seq1  GAATTCTCAGGGATACTCTCAGAGAATCTTTTTTTGTTTGTTTGTTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGGATACTCTCAGAGAATCTTTTTTTGTTTGTTTGTTTGTT  50

seq1  TTTATTAGGTATTTATTTCATTTACATTTCCAATGCTATACCAAAAGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGGTATTTATTTCATTTACATTTCCAATGCTATACCAAAAGTCC  100

seq1  CCCACCTGCTCCCCCACCCACCCACTCCAACTTCTTGGCCCTGTCGTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTGCTCCCCCACCCACCCACTCCAACTTCTTGGCCCTGTCGTTCC  150

seq1  CCTGTACTGAGGCAGATGAAGTTAGCACGACCAATGGGCCTCTCTTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTGAGGCAGATGAAGTTAGCACGACCAATGGGCCTCTCTTTCCA  200

seq1  CTGATGGCTGACTAGGCCATCTTTTGATACATATGCAGTTAGAGACATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGGCTGACTAGGCCATCTTTTGATACATATGCAGTTAGAGACATGA  250

seq1  GCTCTGGGGGGTACTGGGTAGTTCATATTGTTGTTCCTCTTATAGGGTCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGGGGTACTGGGTAGTTCATATTGTTGTTCCTCTTATAGGGTCG  300

seq1  GAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGGGC  350

seq1  CCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTACT  400

seq1  AGGCCCCAGCATACTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCCAGCATACTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGC  450

seq1  AAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGAATCCTGATTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGAATCCTGATTATG  500

seq1  GGATGGTTCCCCGATACGGCAGTCTCTAGATG  532
      ||||||||||||||||||||||||||||||||
seq2  GGATGGTTCCCCGATACGGCAGTCTCTAGATG  532

seq1: chr8_72073998_72074153
seq2: B6Ng01-216F06.g_72_227 (reverse)

seq1  ACCTCACCCCACCCCCAACAATTCTACTGCAGCCCAAGGCAAGAGTCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACCCCACCCCCAACAATTCTACTGCAGCCCAAGGCAAGAGTCACT  50

seq1  CACTTCCTGGGACCCTGGCGCCCAAGCCTGGTAGGCCTTCAGGATTTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCTGGGACCCTGGCGCCCAAGCCTGGTAGGCCTTCAGGATTTGCC  100

seq1  AATGTTGCTAGTCAACCCAGGCTTTCAGAGTCACCTTAGAGAGGGAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGCTAGTCAACCCAGGCTTTCAGAGTCACCTTAGAGAGGGAGAAA  150

seq1  TTTCTG  156
      ||||||
seq2  TTTCTG  156