BAC Information

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BAC

Clone NameB6Ng01-216N15
Chromosome8 (Build37)
Map Location 104,227,245 - 104,228,267
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneCdh11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216N15.bB6Ng01-216N15.g
ACCGA033433GA033434
length1,2331,020
definitionB6Ng01-216N15.b B6Ng01-216N15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtatttacatgtttccattgacacctgttctggtgtaatgttt
gccacacttttaacaggtgaaaaagcctctcatgttatacagcactgcct
agaagtgtggagtgcttggggcaagcccacaattcttaaaacggataatg
ggccagcatatacttctactaaatttcaacaattttgtcatcaaatggat
gtcactcacctgactggccttccttataatcctcaaggacaaggcattgt
ggaatgtgcccaccgcacactcaagtcttatcttataaaacaaaaagggg
gagttgatgagactctgccctcagtgccaagactagcagtatctatggtg
ctctttacacttaattttttgaatctcgatgagcagggacgttctgcagc
tgagcgacatagctcagaccctgatagaccagaagaaatggtcaaatgga
aggatgttttaactggtctgtggaaaggcccggattctatcttaatcaga
tcctggggagctgtttgtgtttttccacagagtgaagccaacccattttg
gctgccggaatgactcacctgcaggatattcatcaaggatggtgcagaag
atgctgacctcccaaggactgttcctgatcctgacaatgctgaacttgtc
tcaggttcctagtataattggcgaacagagatgggctattctctcaactt
tccctaaaccaatgccagttcgccatgatgctatagtttttccaaaattc
tttactactaataaaacagtggatttgccatatttaccctatcatcccac
ccgagcaccattaggagaaaatcactcttttagtagaacagggttctttt
atgttttcaaattaatggaccaggaaattgtatcaacctcacagcccgag
ctttggggaagtttattgagcaccgaggaggttgggtgcgcacacccaag
atacttccatgtagttatacctttacaaatcgaaaccttttggcaggagc
aatttgggtaatggtaacatttctacactaccttttcagacaagaacgtt
ccccactaccaaaaaatagtcccctcatttagcttggtagattgaagctg
atcctgtcttgtcaggattgtccaattctcactactcgtttgggcagaga
ttcagaataacctttgcttttctcccaattaggacgagatgacccagaga
aggactttggtcatgtgagacacaaagtgcaat
gaattcaacacgtgtagtgaggattggggaaaaattcatgaaagaaattt
tgactacattgttctgttgtcataatgataattcaagtctagaatataca
tttccttttgactctccattctgaatggaggcaactgccagggaatagga
gtaatgggaaatgttcattacatttggacagtgtagaagtgattcttctt
actactgactaactgggctatacagtcatagatgagacaaattctgatat
cttagcttgaactatggtcaacttaatttattgtttgagtctcaccattc
tctacatttaatttgaacattttaaggtcctttatacagcatttgataca
tgaataacaaatacaaatatagagggaaccccaaagtcagcacctgatat
atagtgactgcagagttcatcccactgttacacatactggttgctcacat
ccatgccaatggccatgttatttccttagagtgtgaagaaggaagacaaa
ccaaacactaggttttttttttattcttgtgagaaatttcaaacacatat
gacatgtgtgttaagcatgttttatttggtgaggctgtatttgtctttga
agatttcaaattttaaaaaaatatcacctgcttatatatacatggatatt
aagtaaatacatatacatattttattacacaaattaatttatagtataag
tttctaattatttaaatgtatgtatcaatatactcttctaaatgccataa
cttctgagaaatctatctcagtccatttgctttactcttttacttgaata
attgtgaattctttgtgacactttattttatttcagtcaagtaaattaaa
gtacaacaagggcaaatgacctcatgcagcccaatggacaaatttaacca
ccaagtcgtcagcttttgttttctcatctgtatatttcattcttgacaga
cagatgttttacatttgtttttcttttagacacagagatattcataactt
agaaatgacatagtagggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_104227245_104228267
seq2: B6Ng01-216N15.g_70_1089 (reverse)

seq1  ATCCCTTACTATGTCATTTCTAAGTTTATGAAATATCTCTGTGTTCTAAA  50
      ||||| |||||||||||||||||| ||||| |||||||||||| ||||||
seq2  ATCCC-TACTATGTCATTTCTAAG-TTATG-AATATCTCTGTG-TCTAAA  46

seq1  AGAAAAACAAAATGT-AAACATCTTGTCTGTC-AGAATGAAATATACAGA  98
      |||||||| |||||| ||||||| |||||||| |||||||||||||||||
seq2  AGAAAAAC-AAATGTAAAACATC-TGTCTGTCAAGAATGAAATATACAGA  94

seq1  TGAGAAAACAAAAGCTGACGACTTGGTGGTTAAATTTGTCCATTGGGCTG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAACAAAAGCTGACGACTTGGTGGTTAAATTTGTCCATTGGGCTG  144

seq1  CATGAGGTCATTTGCCCTTGTTGTACTTTAATTTACTTGACTGAAATAAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGTCATTTGCCCTTGTTGTACTTTAATTTACTTGACTGAAATAAA  194

seq1  ATAAAGTGTCACAAAGAATTCACAATTA-TCAAGTAAAAGAGTAAAGCAA  247
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATAAAGTGTCACAAAGAATTCACAATTATTCAAGTAAAAGAGTAAAGCAA  244

seq1  ATGGACTGAGATAGATTTCTCAGAAGTTATGGCATTTAGAAGAGTATATT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTGAGATAGATTTCTCAGAAGTTATGGCATTTAGAAGAGTATATT  294

seq1  GATACATACATTTAAATAATTAGAAACTTATACTATAAATTAATTTGTGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATACATTTAAATAATTAGAAACTTATACTATAAATTAATTTGTGT  344

seq1  AATAAAATATGTATATGTATTTACTTAATATCCATGTATATATAAGCAGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATATGTATATGTATTTACTTAATATCCATGTATATATAAGCAGG  394

seq1  TGATATTTTTTTAAAATTTGAAATCTTCAAAGACAAATACAGCCTCACCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTTTTTTAAAATTTGAAATCTTCAAAGACAAATACAGCCTCACCA  444

seq1  AATAAAACATGCTTAACACACATGTCATATGTGTTTGAAATTTCTCACAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACATGCTTAACACACATGTCATATGTGTTTGAAATTTCTCACAA  494

seq1  GAATAAAAAAAAAACCTAGTGTTTGGTTTGTCTTCCTTCTTCACACTCTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAAAAAAAACCTAGTGTTTGGTTTGTCTTCCTTCTTCACACTCTA  544

seq1  AGGAAATAACATGGCCATTGGCATGGATGTGAGCAACCAGTATGTGTAAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATAACATGGCCATTGGCATGGATGTGAGCAACCAGTATGTGTAAC  594

seq1  AGTGGGATGAACTCTGCAGTCACTATATATCAGGTGCTGACTTTGGGGTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGATGAACTCTGCAGTCACTATATATCAGGTGCTGACTTTGGGGTT  644

seq1  CCCTCTATATTTGTATTTGTTATTCATGTATCAAATGCTGTATAAAGGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTATATTTGTATTTGTTATTCATGTATCAAATGCTGTATAAAGGAC  694

seq1  CTTAAAATGTTCAAATTAAATGTAGAGAATGGTGAGACTCAAACAATAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATGTTCAAATTAAATGTAGAGAATGGTGAGACTCAAACAATAAA  744

seq1  TTAAGTTGACCATAGTTCAAGCTAAGATATCAGAATTTGTCTCATCTATG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTGACCATAGTTCAAGCTAAGATATCAGAATTTGTCTCATCTATG  794

seq1  ACTGTATAGCCCAGTTAGTCAGTAGTAAGAAGAATCACTTCTACACTGTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATAGCCCAGTTAGTCAGTAGTAAGAAGAATCACTTCTACACTGTC  844

seq1  CAAATGTAATGAACATTTCCCATTACTCCTATTCCCTGGCAGTTGCCTCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTAATGAACATTTCCCATTACTCCTATTCCCTGGCAGTTGCCTCC  894

seq1  ATTCAGAATGGAGAGTCAAAAGGAAATGTATATTCTAGACTTGAATTATC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAATGGAGAGTCAAAAGGAAATGTATATTCTAGACTTGAATTATC  944

seq1  ATTATGACAACAGAACAATGTAGTCAAAATTTCTTTCATGAATTTTTCCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGACAACAGAACAATGTAGTCAAAATTTCTTTCATGAATTTTTCCC  994

seq1  CAATCCTCACTACACGTGTTGAATTC  1023
      ||||||||||||||||||||||||||
seq2  CAATCCTCACTACACGTGTTGAATTC  1020