BAC Information

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BAC

Clone NameB6Ng01-217M02
Chromosome8 (Build37)
Map Location 53,896,702 - 53,897,333
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC623872, LOC100040220, LOC623935, 1190028D05Rik, LOC676688
Downstream geneAga, Neil3, LOC100040107
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217M02.g
ACCGA034070
length631
definitionB6Ng01-217M02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatctccaatcacttttgggtgcgaaggctggcaatgggaaaga
gttctgtggtaagaaggggcctgaacaataggtcatagctgaaggaaggt
acgggggaaatgtcccgctagaggactatatacatgtctcctgggtttgg
caccacataaatggttatggaagctgacgaccagcagaggctcactgagg
acaaaaagaatgttattaaaataattttattttattacctccaaatgtca
ccctctcgaacagttctttaccccataatccccattttaccttcttagag
ggttccctgcctcccttcctctcccccaacattccccttccctggaacag
caagtctctacaggattagatatcatcttctccagctgatgccatacaag
gcagtcttctgctactatgaggggtctagaaccaccgagtgtatgctctg
gttggtggttaagtttgggagtctaggttagttgacactgttggtcttcc
tatgggtttgacatctccttctgctcttttaatctttcccctaaatcttc
agtaggagtccccggcgataggctgtacatatatgcatctgtttcaggta
gctgctgctacagatactcagaggacaaggt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_53896702_53897333
seq2: B6Ng01-217M02.g_67_697

seq1  GAATTCGATCTCCAAATCAGTTTTGGGTGCAGAGGCTGGCAATGGGAAAG  50
      |||||| |||||| ||||| ||||||||||  ||||||||||||||||||
seq2  GAATTCTATCTCC-AATCACTTTTGGGTGCGAAGGCTGGCAATGGGAAAG  49

seq1  AGTTCTGTGGTAAGAAGGGGCCTGAACAATAGGTCATAGCTGAAGGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGTGGTAAGAAGGGGCCTGAACAATAGGTCATAGCTGAAGGAAGG  99

seq1  TACGGGGGAAATGTCCCAGTAGAGGACTATATACATGTCTCCTGGGTTTG  150
      |||||||||||||||||  |||||||||||||||||||||||||||||||
seq2  TACGGGGGAAATGTCCCGCTAGAGGACTATATACATGTCTCCTGGGTTTG  149

seq1  GCACCACATAAATGGTTATGGAAGCTGACGACCAGCAGAGGCTCACTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCACATAAATGGTTATGGAAGCTGACGACCAGCAGAGGCTCACTGAG  199

seq1  GACAAAAAGAATGTTATTAAAATTATTTTATTTTATTACATCCAAATGTC  250
      ||||||||||||||||||||||| ||||||||||||||| ||||||||||
seq2  GACAAAAAGAATGTTATTAAAATAATTTTATTTTATTACCTCCAAATGTC  249

seq1  ACCCTCTCGCAGAGTTCTTTACCCCATAATCCCCATTTTAGCTTCTTAGA  300
      ||||||||| | |||||||||||||||||||||||||||| |||||||||
seq2  ACCCTCTCGAACAGTTCTTTACCCCATAATCCCCATTTTACCTTCTTAGA  299

seq1  GGGTTCCCTGCCTCCCTTCCTCTCCCCCAACATTCCCCTTCCCTGGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCCCTGCCTCCCTTCCTCTCCCCCAACATTCCCCTTCCCTGGAACA  349

seq1  GCAAGTCTCTACAGGATTAGATATCATCTTCTCCAGCTGAGGCCAGACAA  400
      |||||||||||||||||||||||||||||||||||||||| |||| ||||
seq2  GCAAGTCTCTACAGGATTAGATATCATCTTCTCCAGCTGATGCCATACAA  399

seq1  GGCAGTCTTCTGCTACTATGAGGGGTCTAGAACCAGCAAGTGTATGCTCT  450
      ||||||||||||||||||||||||||||||||||| | ||||||||||||
seq2  GGCAGTCTTCTGCTACTATGAGGGGTCTAGAACCACCGAGTGTATGCTCT  449

seq1  GGTTGGTGGTTAAGTTTGGGAGTCTAGGTTAGTTGACACTGTTGGTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTGGTTAAGTTTGGGAGTCTAGGTTAGTTGACACTGTTGGTCTTC  499

seq1  CTATGGGTTTGACATCTCCTTCTGCTCTTTTAATCTTTCCCCTAAATCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGGTTTGACATCTCCTTCTGCTCTTTTAATCTTTCCCCTAAATCTT  549

seq1  CAGTAGGAGTCCCCGGCGATAGTCTGTACATATATGCATCTGTTTCAGTT  600
      |||||||||||||||||||||| ||||||||||||||||||||||||| |
seq2  CAGTAGGAGTCCCCGGCGATAGGCTGTACATATATGCATCTGTTTCAGGT  599

seq1  AGCTGCTGGTAGAGCCACTCAGAGGACAAGGT  632
      |||||||| || ||  ||||||||||||||||
seq2  AGCTGCTGCTACAGATACTCAGAGGACAAGGT  631