BAC Information

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BAC

Clone NameB6Ng01-223C21
Chromosome8 (Build37)
Map Location 55,374,892 - 55,375,975
singlet/doubletsinglet
Overlap genenone
Upstream geneAga, Neil3, LOC100040107, Vegfc
Downstream geneSpcs3, Asb5, Spata4, Wdr17, Gpm6a, LOC667624, LOC100040156, LOC100040382, LOC100040392, EG546212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223C21.bB6Ng01-223C21.g
ACCGA037995GA037996
length1,0841,234
definitionB6Ng01-223C21.b B6Ng01-223C21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggcccagtcgacctggtgtgggcttcagggagccttaagttt
cttaagatgcttcatttgcctccatctggaataatctttgaggaaatggg
tatcgtatatatgaaattttgatgtatatgctggtactagctttattaaa
ataaatataaaaattatatataatatttatgcctaaaaaatcacagacat
atgttcatcagttttcaagaaagttttgacagttgtaaaatccatcatag
agataactatcttagatgaagatatcttgcagagataatatatacaattg
aactttccatgttatgaatactaagtaaaaccaacttggaaaatagttta
ataattttatattaatataaataacttgtctgagattcatcagagaatga
attttaaataagagatgctgagagtatggaaaaggttggatttttgataa
aaagggaggtgaaatgaaagcagagactgtcacatagacactggaaggag
aattatggcaatgaacttccctcagcagagcctttgccgctgtttggcta
ctgtgcagaatcactggttttatctatcggcacagaaacttctggtggaa
aaaccttcattctgcaactgtcatcaaatatctgatctctctttagggac
aggttaaagctaccatttccttcatattcataatatcactttgaacccag
tttttgtctgcttctacacaataccagtatccctccccctctgagattga
tgcatcctgcagaaggggaaggggaaagactgtaagagacagaggggatg
gaggacatcaggagaacacagcctcctgcatcaactcagcaaagtgacag
acagtggttaatggagcatagggtcaacattttctaaaagttttgttgtt
tagtttgttttaccatggttgcctcatgttaattacagaggacaaggtaa
tatgaatttaataaagccttcctgaaggtgccattctcattaaatccgtg
ctcaatttaatgatgatggtgtttttaccttctgacaagggaaactgttc
taccataaaaatggtgtctacatatttggagaga
gaattcaataaagaaagagaaaagctgaaagaactcaacctgaaaatgaa
aatggaattgaaaactcaacaacccaattaaaaaacttagggaaagcctt
accaaaagaataaatcaaataaaagcttgactattgtgatggatgaagta
aaagtgctagatcatttgaggcaaaatttttcaaaattaaccacatgaaa
gaaatatgcatgaactttgagacacaatgaaaagacaaaagtcttcaaat
cagagaagactgtcaggtcaatagcgtagaccggatcttcaaaaggatca
tagaaaaaaactttcccagactaagagaaggcatacccataaaaatctaa
gaggcacatatagcatcagataggaatggccagaaagaaactctctgtga
catattatagtttaaacacactaaatacgtagaacaaaaagatgatatgg
aaagccacaagaaacaaagcacaggccacatataaaagaaaacctatcag
attatcagataacttctcaaagaaatgttaaaagccagaagagtctgcag
caacatactttaagttttgaaagaccataggtgctaaactagactttttt
acccagataaactatatacaatagctgaagaaaggaaacaatacccatga
tataatgtctagtctaaaagaatccgtatccaacaagacagccctagaga
aagtcctgaaagcaagagaccatggaaaggaaacaaaagaaatgaaaaac
aaaataaaacatcaacaacaaaaacaggtacagcaaagtacacaaggact
aaaatttttctttcaacaaccaggtataataatgacatgggatacaagta
aacaccaaataccttttcacatatgctagcaataagcgactgaaatgcaa
aatttgaaaactaccttagagtttaatatagtgtgagtcaaactgaagtg
ctgggaagtacatctgccaatctgcatttctccaactacatctttcaata
atgcctttgagtatcagtaaacttaattcttcaaaacaaaataacacagt
tagagtgtactaaggaaaaaaaaccctattctggttgtctacaaggatct
tcatcttcatgggatagaatactacttagaggtggatagtattcccaaag
ccaatagaaacaggatcaggcaaacattaataattcctccctaatcctgg
gagaccacaatagagctcctttctcttcaaatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_55374892_55375975
seq2: B6Ng01-223C21.b_43_1126

seq1  GAATTCTAGGCCCAGTCGACCTGGTGTGGGCTTCAGGGAGCCTTAAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCCCAGTCGACCTGGTGTGGGCTTCAGGGAGCCTTAAGTTT  50

seq1  CTTAAGATGCTTCATTTGCCTCCATCTGGAATAATCTTTGAGGAAATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGATGCTTCATTTGCCTCCATCTGGAATAATCTTTGAGGAAATGGG  100

seq1  TATCGTATATATGAAATTTTGATGTATATGCTGGTACTAGCTTTATTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGTATATATGAAATTTTGATGTATATGCTGGTACTAGCTTTATTAAA  150

seq1  ATAAATATAAAAATTATATATAATATTTATGCCTAAAAAATCACAGACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATAAAAATTATATATAATATTTATGCCTAAAAAATCACAGACAT  200

seq1  ATGTTCATCAGTTTTCAAGAAAGTTTTGACAGTTGTAAAATCCATCATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATCAGTTTTCAAGAAAGTTTTGACAGTTGTAAAATCCATCATAG  250

seq1  AGATAACTATCTTAGATGAAGATATCTTGCAGAGATAATATATACAATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACTATCTTAGATGAAGATATCTTGCAGAGATAATATATACAATTG  300

seq1  AACTTTCCATGTTATGAATACTAAGTAAAACCAACTTGGAAAATAGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCCATGTTATGAATACTAAGTAAAACCAACTTGGAAAATAGTTTA  350

seq1  ATAATTTTATATTAATATAAATAACTTGTCTGAGATTCATCAGAGAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTATATTAATATAAATAACTTGTCTGAGATTCATCAGAGAATGA  400

seq1  ATTTTAAATAAGAGATGCTGAGAGTATGGAAAAGGTTGGATTTTTGATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAATAAGAGATGCTGAGAGTATGGAAAAGGTTGGATTTTTGATAA  450

seq1  AAAGGGAGGTGAAATGAAAGCAGAGACTGTCACATAGACACTGGAAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAGGTGAAATGAAAGCAGAGACTGTCACATAGACACTGGAAGGAG  500

seq1  AATTATGGCAATGAACTTCCCTCAGCAGAGCCTTTGCCGCTGTTTGGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGGCAATGAACTTCCCTCAGCAGAGCCTTTGCCGCTGTTTGGCTA  550

seq1  CTGTGCAGAATCACTGGTTTTATCTATCGGCACAGAAACTTCTGGTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAGAATCACTGGTTTTATCTATCGGCACAGAAACTTCTGGTGGAA  600

seq1  AAACCTTCATTCTGCAACTGTCATCAAATATCTGATCTCTCTTTAGGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTCATTCTGCAACTGTCATCAAATATCTGATCTCTCTTTAGGGAC  650

seq1  AGGTTAAAGCTACCATTTCCTTCATATTCATAATATCACTTTGAACCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAAAGCTACCATTTCCTTCATATTCATAATATCACTTTGAACCCAG  700

seq1  TTTTTGTCTGCTTCTACACAATACCAGTATCCCTCCCCCTCTGAGATTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTCTGCTTCTACACAATACCAGTATCCCTCCCCCTCTGAGATTGA  750

seq1  TGCATCCTGCAGAAGGGGAAGGGGAAAGACTGTAAGAGACAGAGGGGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCTGCAGAAGGGGAAGGGGAAAGACTGTAAGAGACAGAGGGGATG  800

seq1  GAGGACATCAGGAGAACACAGCCTCCTGCATCAACTCAGCAAAGTGACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACATCAGGAGAACACAGCCTCCTGCATCAACTCAGCAAAGTGACAG  850

seq1  ACAGTGGTTAATGGAGCATAGGGTCAACATTTTCTAAAAGTTTTGTTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGTTAATGGAGCATAGGGTCAACATTTTCTAAAAGTTTTGTTGTT  900

seq1  TAGTTTGTTTTACCATGGTTGCCTCATGTTAATTACAGAGGACAAGGTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGTTTTACCATGGTTGCCTCATGTTAATTACAGAGGACAAGGTAA  950

seq1  TATGAATTTAATAAAGCCTTCCTGAAGGTGCCATTCTCATTAAATCCGTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATTTAATAAAGCCTTCCTGAAGGTGCCATTCTCATTAAATCCGTG  1000

seq1  CTCAATTTTAATGATGATGGTGTTTTTACCTTCTGACAAGGGAAACTGTT  1050
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAA-TTTAATGATGATGGTGTTTTTACCTTCTGACAAGGGAAACTGTT  1049

seq1  CTACCATAAAA--TGTGTCTACATATTTGAGAGAGA  1084
      |||||||||||   ||||||||||||||| ||||||
seq2  CTACCATAAAAATGGTGTCTACATATTTG-GAGAGA  1084