BAC Information

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BAC

Clone NameB6Ng01-223L16
Chromosome8 (Build37)
Map Location 65,999,401 - 66,000,294
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040804, LOC665267, Spock3
Downstream geneLOC384831, EG244495, Tll1, LOC100040989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223L16.bB6Ng01-223L16.g
ACCGA038387GA038388
length945897
definitionB6Ng01-223L16.b B6Ng01-223L16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgtgtgttggattttg
tcaaatgctttctcagcatctatcgagatgatcatgtggtttttgtcttt
gagtttgtttatatactggattgcgttgatggatttccatatattgaacc
atccctgcatccctgggatgaaacctactttgtcaggatggatgattgtt
ttgatgtgttcttggattcgggtagcaagaactttattgaggatttttgc
atcaatattttaagggaaattggtctgaagttctctatgtttgttgggtc
tttttgtggttttggtatcagagtaattgtggcttcatagaatgagttgg
gtagactaccttctgtttctattttgtggaatagtttgtgaagaactgga
attagatcttctttgaaggtctgatagaactctgcagtaaacccatctgg
tcctgggcttttcttttggttgggagaatattaatgactgctcctatttc
tttgggggatatagggctgtttagataattaacctgatcttgattcaact
ttggtacctggtatctgtctagaaattcctccatttcatccaggttctcc
agttttgttgagtatagccttttgtagaaggatctgatggtgttttggat
ttcttcagaatctgttgttatgtctcacatttcatttctgattttgttaa
ttagaatgctttctctgtgccctctagtgtgtctggctaagggtttgtct
atcttgttgattttctcaaagaaccagctcctcatttggttgattgtttg
aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta
tttcctgctgtgtactcctcttgggtgaatttgcttccttttggtctaga
acttttaaggtgtgttgtcagctgttaatgtgtgctcctctctag

gaattctcccacgggcccatttcgagtttcctgatttcaatagccacatt
tgtttaaacatacccataataaagattcaaagctatgatcaatactaaag
ataattatttccagtgccatctattatatctttattgcatagtttcattt
actgtttagatcagtaaagttccacgtgtatgtattttccttattgtttc
atcagttgttgaacacccacactcattatatttatatttttctggcttgt
gaaacgacagcagtgaacaggattagcaaatgtctccataataagatata
gagtcctttggatatgcgcccaggaatagtaaggctagatcttgaggtag
attgacatctttagataactctacagtggcacccatagtaggtaaactag
catgtgtacatgttctcttttatttccatcaatatcaccatatcttggtt
gattcttaaatccatctcacaaaggtaaaacagactacaatagagtttca
ttatctggagtttatatccttaagaaatgctttacagcttgagaattatt
tcaggttgaaacatgtgcttgacataataatttcagatgaatagcttggg
aagtgaagtggaaaacaagctttggtgaacaggtgattaatttgataact
tgggtgttttagttatgtatatttttagcttcagagcacaaacactttat
atagaccaatcctaagatttatttttctaaaacacaacataataagagga
aaataccttggtatgcatatatgtatgcatataaacacacacacacacac
acacacacacacacacacacacacacatataattcattttgttttaaatt
gtaactgttgatatgtgtgtgtgtatgtgtgtgtgcgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_65999401_66000294
seq2: B6Ng01-223L16.g_65_958 (reverse)

seq1  ACACACACGCACACACACATACACACACACATATCAACAGTTACAATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACGCACACACACATACACACACACATATCAACAGTTACAATTTA  50

seq1  AAACAAAATGAATTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAATGAATTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100

seq1  GTGTGTGTGTTTATATGCATACATATATGCATACCAAGGTATTTTCCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTTTATATGCATACATATATGCATACCAAGGTATTTTCCTCT  150

seq1  TATTATGTTGTGTTTTAGAAAAATAAATCTTAGGATTGGTCTATATAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGTTGTGTTTTAGAAAAATAAATCTTAGGATTGGTCTATATAAAG  200

seq1  TGTTTGTGCTCTGAAGCTAAAAATATACATAACTAAAACACCCAAGTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGCTCTGAAGCTAAAAATATACATAACTAAAACACCCAAGTTAT  250

seq1  CAAATTAATCACCTGTTCACCAAAGCTTGTTTTCCACTTCACTTCCCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTAATCACCTGTTCACCAAAGCTTGTTTTCCACTTCACTTCCCAAG  300

seq1  CTATTCATCTGAAATTATTATGTCAAGCACATGTTTCAACCTGAAATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCATCTGAAATTATTATGTCAAGCACATGTTTCAACCTGAAATAAT  350

seq1  TCTCAAGCTGTAAAGCATTTCTTAAGGATATAAACTCCAGATAATGAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGCTGTAAAGCATTTCTTAAGGATATAAACTCCAGATAATGAAAC  400

seq1  TCTATTGTAGTCTGTTTTACCTTTGTGAGATGGATTTAAGAATCAACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGTAGTCTGTTTTACCTTTGTGAGATGGATTTAAGAATCAACCAA  450

seq1  GATATGGTGATATTGATGGAAATAAAAGAGAACATGTACACATGCTAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGTGATATTGATGGAAATAAAAGAGAACATGTACACATGCTAGTT  500

seq1  TACCTACTATGGGTGCCACTGTAGAGTTATCTAAAGATGTCAATCTACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTACTATGGGTGCCACTGTAGAGTTATCTAAAGATGTCAATCTACCT  550

seq1  CAAGATCTAGCCTTACTATTCCTGGGCGCATATCCAAAGGACTCTATATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCTAGCCTTACTATTCCTGGGCGCATATCCAAAGGACTCTATATC  600

seq1  TTATTATGGAGACATTTGCTAATCCTGTTCACTGCTGTCGTTTCACAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATGGAGACATTTGCTAATCCTGTTCACTGCTGTCGTTTCACAAGC  650

seq1  CAGAAAAATATAAATATAATGAGTGTGGGTGTTCAACAACTGATGAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAATATAAATATAATGAGTGTGGGTGTTCAACAACTGATGAAACA  700

seq1  ATAAGGAAAATACATACACGTGGAACTTTACTGATCTAAACAGTAAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGAAAATACATACACGTGGAACTTTACTGATCTAAACAGTAAATGA  750

seq1  AACTATGCAATAAAGATATAATAGATGGCACTGGAAATAATTATCTTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGCAATAAAGATATAATAGATGGCACTGGAAATAATTATCTTTAG  800

seq1  TATTGATCATAGCTTTGAATCTTTATTATGGGTATGTTTAAACAAATGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATCATAGCTTTGAATCTTTATTATGGGTATGTTTAAACAAATGTG  850

seq1  GCTATTGAAATCAGGAAACTCGAAATGGGCCCGTGGGAGAATTC  894
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTGAAATCAGGAAACTCGAAATGGGCCCGTGGGAGAATTC  894


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