BAC Information

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BAC

Clone NameB6Ng01-224C16
Chromosome8 (Build37)
Map Location 130,369,137 - 130,510,364
singlet/doubletdoublet
Overlap genenone
Upstream geneTomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, Pard3, EG628847
Downstream geneNrp1, LOC668494, Itgb1, LOC100042659, LOC100042667, Ccdc7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224C16.bB6Ng01-224C16.g
ACCGA038703GA038704
length1,009350
definitionB6Ng01-224C16.b B6Ng01-224C16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,369,137 - 130,370,143)(130,510,015 - 130,510,364)
sequence
gaattcattgctgtacaggtgatgggtcagttttagacatgtcagggaaa
gcttgtataaaaaccaaagatagacagtagacataaattatgacactcta
ggaagatcagaaaatagggccaagctactaacagttcgttctgctagcag
gcaatttcctgctttattcttgaagcaagcacaacaccaatgaatacatt
gggccaaatatatagggttatataatattgaagattagagtcagctgtgg
atgcatttcttgcccacttcagctgctcaagaagcagagacaacagaatg
acttcaacccaggaatatgaggccggcctggacactattgcaagatcctg
ccccaaaacaatttttatatttaaatttaaatttttaaaattcattatgt
aaagttctatgcacatgaactgtgaagagacatctttctttatacaccag
tatccaaaacactcaccctttctccaactttgtatgggattaatctgtgt
gtccctctttctcctttactaggtattaatgacattgtttgagggcaaag
actacattgttttttgttttttgtttgttttttttttaatctttaagaat
actaatgagaggatcaatggctcctgacttctttcctaggttttctatct
ccagagttgtctcccttgtaataaggacacatgttccactatgttcttag
cagccttatttaatagcaagaagctggaaagaacccagatgtcccttaag
agaggaatggatacagaaaatgtggtactgcctggcagtggtggtgcatg
cctttcatcccagcacttgggaggcagaggcaggtggatttctgagttca
aggtcagcctggtctacaaagtgagttctagggacagccagggctataca
gaagaaccccgttcttcgaaaaaccaaaaaaaaaaaaaaaaaataaccaa
acaaaaaaaaactcccaaaaaaaaaaaaaaaaaaccctccaaaaccccaa
aagaaaatg
tattcatggttcattagggctttgaacatcatatggcatttccatatacc
caacctatcaagcatagccctctttaaaattttctacacgtctttagatg
tgcctcccaaaccaagctattgaacgcaaaaagagaaagacatgtacggg
tggaacactacaaatatacaactcttgtgtgtgttttcaccctaggagag
agactttaacaaaaatgtgtttttatattttaagattgaagtcatttgga
aacctgccaatcacacgtcaatcagatgagccttgcagaaaatgttccca
aattcttggacactgcttccttcaggaagggagttggggcgggggggggg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_130369137_130370143
seq2: B6Ng01-224C16.b_50_1058

seq1  GAATTCATTGCTGTACAGGTGATGGGTCAGTTTTAGACATGTCAGGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCTGTACAGGTGATGGGTCAGTTTTAGACATGTCAGGGAAA  50

seq1  GCTTGTATAAAAACCAAAGATAGACAGTAGACATAAATTATGACACTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTATAAAAACCAAAGATAGACAGTAGACATAAATTATGACACTCTA  100

seq1  GGAAGATCAGAAAATAGGGCCAAGCTACTAACAGTTCGTTCTGCTAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATCAGAAAATAGGGCCAAGCTACTAACAGTTCGTTCTGCTAGCAG  150

seq1  GCAATTTCCTGCTTTATTCTTGAAGCAAGCACAACACCAATGAATACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTCCTGCTTTATTCTTGAAGCAAGCACAACACCAATGAATACATT  200

seq1  GGGCCAAATATATAGGGTTATATAATATTGAAGATTAGAGTCAGCTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAAATATATAGGGTTATATAATATTGAAGATTAGAGTCAGCTGTGG  250

seq1  ATGCATTTCTTGCCCACTTCAGCTGCTCAAGAAGCAGAGACAACAGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTTCTTGCCCACTTCAGCTGCTCAAGAAGCAGAGACAACAGAATG  300

seq1  ACTTCAACCCAGGAATATGAGGCCGGCCTGGACACTATTGCAAGATCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAACCCAGGAATATGAGGCCGGCCTGGACACTATTGCAAGATCCTG  350

seq1  CCCCAAAACAATTTTTATATTTAAATTTAAATTTTTAAAATTCATTATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAACAATTTTTATATTTAAATTTAAATTTTTAAAATTCATTATGT  400

seq1  AAAGTTCTATGCACATGAACTGTGAAGAGACATCTTTCTTTATACACCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCTATGCACATGAACTGTGAAGAGACATCTTTCTTTATACACCAG  450

seq1  TATCCAAAACACTCACCCTTTCTCCAACTTTGTATGGGATTAATCTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAAAACACTCACCCTTTCTCCAACTTTGTATGGGATTAATCTGTGT  500

seq1  GTCCCTCTTTCTCCTTTACTAGGTATTAATGACATTGTTTGAGGGCAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCTTTCTCCTTTACTAGGTATTAATGACATTGTTTGAGGGCAAAG  550

seq1  ACTACATTGTTTTTTGTTTTTTGTTTGTTTTTTTTTTAATCTTTAAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATTGTTTTTTGTTTTTTGTTTGTTTTTTTTTTAATCTTTAAGAAT  600

seq1  ACTAATGAGAGGATCAATGGCTCCTGACTTCTTTCCTAGGTTTTCTATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGAGAGGATCAATGGCTCCTGACTTCTTTCCTAGGTTTTCTATCT  650

seq1  CCAGAGTTGTCTCCCTTGTAATAAGGACACATGTTCCACTATGTTCTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTTGTCTCCCTTGTAATAAGGACACATGTTCCACTATGTTCTTAG  700

seq1  CAGCCTTATTTAATAGCAAGAAGCTGGAAAGAACCCAGATGTCCCTTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTATTTAATAGCAAGAAGCTGGAAAGAACCCAGATGTCCCTTAAG  750

seq1  AGAGGAATGGATACAGAAAATGTGGTACTGCCTGGCAGTGGTGGTGCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAATGGATACAGAAAATGTGGTACTGCCTGGCAGTGGTGGTGCATG  800

seq1  CCTTTCATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCA  850

seq1  AGGTCAGCCTGGTCTACAAAGTGAGTTCTA-GGACAGCCAGGGCTATACA  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGGTCAGCCTGGTCTACAAAGTGAGTTCTAGGGACAGCCAGGGCTATACA  900

seq1  G-AGAACCCCGT--CTCGAAAAACCCAAAAAAAAAAAAAAAAAAAAAAAA  946
      | ||||||||||   ||||||||||     |||||||||||||||||| |
seq2  GAAGAACCCCGTTCTTCGAAAAACC-----AAAAAAAAAAAAAAAAAATA  945

seq1  ACCAACCAAAAAAAAACACC---AAAAAAAAAAAAAAAAACCACCAAAAC  993
      ||||| ||||||||||| ||   |||||||||||||||| || |||||||
seq2  ACCAAACAAAAAAAAACTCCCAAAAAAAAAAAAAAAAAACCCTCCAAAAC  995

seq1  ACCAAAAGAAAATG  1007
       |||||||||||||
seq2  CCCAAAAGAAAATG  1009

seq1: chr8_130510015_130510364
seq2: B6Ng01-224C16.g_73_422 (reverse)

seq1  CCCCCCCCCCGCCCCAACTCCCTTCCTGAAGGAAGCAGTGTCCAAGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCGCCCCAACTCCCTTCCTGAAGGAAGCAGTGTCCAAGAATT  50

seq1  TGGGAACATTTTCTGCAAGGCTCATCTGATTGACGTGTGATTGGCAGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACATTTTCTGCAAGGCTCATCTGATTGACGTGTGATTGGCAGGTT  100

seq1  TCCAAATGACTTCAATCTTAAAATATAAAAACACATTTTTGTTAAAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATGACTTCAATCTTAAAATATAAAAACACATTTTTGTTAAAGTCT  150

seq1  CTCTCCTAGGGTGAAAACACACACAAGAGTTGTATATTTGTAGTGTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTAGGGTGAAAACACACACAAGAGTTGTATATTTGTAGTGTTCCA  200

seq1  CCCGTACATGTCTTTCTCTTTTTGCGTTCAATAGCTTGGTTTGGGAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTACATGTCTTTCTCTTTTTGCGTTCAATAGCTTGGTTTGGGAGGCA  250

seq1  CATCTAAAGACGTGTAGAAAATTTTAAAGAGGGCTATGCTTGATAGGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAAGACGTGTAGAAAATTTTAAAGAGGGCTATGCTTGATAGGTTG  300

seq1  GGTATATGGAAATGCCATATGATGTTCAAAGCCCTAATGAACCATGAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATGGAAATGCCATATGATGTTCAAAGCCCTAATGAACCATGAATA  350