BAC Information

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BAC

Clone NameB6Ng01-226B05
Chromosome8 (Build37)
Map Location 84,050,887 - 84,158,426
singlet/doubletdoublet
Overlap genenone
Upstream geneFrem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793, LOC236010, LOC384852
Downstream geneInpp4b, LOC671182, Il15, EG666564
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226B05.bB6Ng01-226B05.g
ACCGA040108GA040109
length1,2091,168
definitionB6Ng01-226B05.b B6Ng01-226B05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,157,222 - 84,158,426)(84,050,887 - 84,052,055)
sequence
gaattcatcagcagtacatgtacatgagtatatattcatatcaaacaagg
tcttgattgtagatattcactcctagaactacacttcgagccataagctt
tcaagcaaacacacattcatttgcctgaatgctcataacactaaaaacat
tagttccttagtgatactataaaaagatgccttgtgtatggtagttgaag
aaaatatgactcatcttaacttctatctgaattaacttgaagactcttgt
gttctttagcattatatcattttgaccaaatagctgaggaaagcagtttc
aagaaggaagggtttactttggcctattgtttcagagagttaaaatttga
tgactcaattctgagtctcagtgaggcagaacattctagtaaggaaaaac
tggagaaaattttgttaacctctaaacagccactaataagtggccaatgg
aggagagaccaaggatcaagaacaaacactcccttcaaaagcaaattcca
gaaatctatgtattcaagctgagtcccattctctaaaatttccactgtct
cccaaaataaagtaaacagccgggaaccaagaattcaacacatgaacctg
tcagataattttgaatcaaaccggaacagttctcttatgaaaactgagaa
atgtctaaatttcacagtggcaaatagcccagttgaaactgtaacattcc
taaaaggactcatatcttttttttttgtattgcagacaagggagtgaagg
ttatgggaataaaaatatttatccagaattacttcaataaaatattaaac
atgactatttaaacatgacttgtttctacttagatactgaaaaaaaatca
aaacaaaaaaacctttataattatttttacttcacaatacaaagtaaaca
taagatgaggaaatgatggggagagagttgaagatagtgttcaggctaga
aatgtgatcaattttacctcaataatgcaaataaatagcacaaataaaaa
atgaaaaagaagttataataagcaacctgtccttatacaagcttccttcc
atgtatactaaattacacaaacacatacactcacatacacatacatacca
cacactaccaccacccccaaagagaacattcatcagtccatcatagctca
caggccagaaaatgtagacagactatcttcctcaatcacagtccctggag
gttgggaga

gaattcttgccaagtaattaccttgaatattctgtctgtaggaaaaatgt
aaagagaagtggaaattggtaaaattaattaatttcttgcaaaatcactt
tccacatcattagaacatttgttttcaaatgtcagaggcagataaaatct
tttttgcagcatacccttcttcaagtgagctgaagcccacagaatacaat
ggtagacatgtagcatctcagagactcagacagacaaaattgccctcaga
acagaaaactgctgtgctttttatgatctttagagttgttggtgcatgga
cttaggataaatatgagcagacatcgagaagcatagacaacaggcttgcc
agctatactccttacagactgaaacattaaaatcctacacaataaaattt
gttacattaaattccaagtaattgtgagacatgttactagaaaccgtggt
agtaaatgtgactacatctctgctttctgttatatgaccttcttttcata
attccctctcattattaatcatttttattattttgttattttaatttcta
gcatcagaagaaaacaactttagggagcctttttgtccttcccctctctg
caccctctgctccttccctctcttctcctttctccctctggtctcttcct
ctccctctctccactctttctacttttgaccttcttttatccagatgttt
gctttaatgtaaaaattaatgccactttaaatcacatcctttcatcttaa
gctttaaatacctgccctttcctatccatttaatctttttactttctctt
caactttaccccgtactcaaaggcagctaattagtcagcatccacagcag
aggtggagaaagggttgctctcatttccaatgccttttatctcgctaatg
aactgcattccgaactttgagaattctgatttggttgaggggatttccct
gcttgttaagaccctggtgtggtcctggcagctctgggttatttgaaatc
agtgctctgggcagcctgctctcatgtttatgtgtgaatagaacataatc
gtgtctatactaggaaaggaggatcagctcatgtgcatgacctcaacaga
aggactatagtctgagaaattgatgctaagcgtattggaactgcttgaga
ccacgccacatacagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_84157222_84158426
seq2: B6Ng01-226B05.b_47_1255 (reverse)

seq1  TCTCCAAACCTCCA-GGACTGTGAATGAGG-AGATAGGTCTGTCTACATT  48
      ||||| |||||||| ||||||||| ||||| ||||| |||||||||||||
seq2  TCTCCCAACCTCCAGGGACTGTGATTGAGGAAGATA-GTCTGTCTACATT  49

seq1  TCCT-GCCTGTGAGCTATGATTGACTGATGAATG-TCTCTTT-GGGGTGG  95
      | || |||||||||||||||| |||||||||||| ||||||| |||||||
seq2  TTCTGGCCTGTGAGCTATGATGGACTGATGAATGTTCTCTTTGGGGGTGG  99

seq1  TGGTAGTGTGT-GTATGTATGTGTATGTGAGTGTATGTG-TTGTGTAATT  143
      ||||||||||| ||||||||||||||||||||||||||| |||||||| |
seq2  TGGTAGTGTGTGGTATGTATGTGTATGTGAGTGTATGTGTTTGTGTAA-T  148

seq1  TTAGTATACATGGAAGGAAGCTTGTATAAGGACAGGGTTGCTTA-TATAA  192
      |||||||||||||||||||||||||||||||||| ||||||||| |||||
seq2  TTAGTATACATGGAAGGAAGCTTGTATAAGGACA-GGTTGCTTATTATAA  197

seq1  CTTCTTTTTCATTTTTTTATTTGTGCTATTTATTTGCATTATTGAGGTAA  242
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTTCA-TTTTTTATTTGTGCTATTTATTTGCATTATTGAGGTAA  246

seq1  AATTGATCACATTTCTAGCCTGAACACTATCTTCAACTCTCTCCCCATCA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATCACATTTCTAGCCTGAACACTATCTTCAACTCTCTCCCCATCA  296

seq1  TTTCCTCATCTTATGTTTACTTTGTATTGTGAAGTAAAAATAATTATAAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCATCTTATGTTTACTTTGTATTGTGAAGTAAAAATAATTATAAA  346

seq1  GGTTTTTTTGTTTTGATTTTTTTTCAGTATCTAAGTAGAAACAAGTCATG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTGTTTTGATTTTTTTTCAGTATCTAAGTAGAAACAAGTCATG  396

seq1  TTTAAATAGTCATGTTTAATATTTTATTGAAGTAATTCTGGATAAATATT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAGTCATGTTTAATATTTTATTGAAGTAATTCTGGATAAATATT  446

seq1  TTTATTCCCATAACCTTCACTCCCTTGTCTGCAATACAAAAAAAAAAGAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCCCATAACCTTCACTCCCTTGTCTGCAATACAAAAAAAAAAGAT  496

seq1  ATGAGTCCTTTTAGGAATGTTACAGTTTCAACTGGGCTATTTGCCACTGT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCCTTTTAGGAATGTTACAGTTTCAACTGGGCTATTTGCCACTGT  546

seq1  GAAATTTAGACATTTCTCAGTTTTCATAAGAGAACTGTTCCGGTTTGATT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTAGACATTTCTCAGTTTTCATAAGAGAACTGTTCCGGTTTGATT  596

seq1  CAAAATTATCTGACAGGTTCATGTGTTGAATTCTTGGTTCCCGGCTGTTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTATCTGACAGGTTCATGTGTTGAATTCTTGGTTCCCGGCTGTTT  646

seq1  ACTTTATTTTGGGAGACAGTGGAAATTTTAGAGAATGGGACTCAGCTTGA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTTTGGGAGACAGTGGAAATTTTAGAGAATGGGACTCAGCTTGA  696

seq1  ATACATAGATTTCTGGAATTTGCTTTTGAAGGGAGTGTTTGTTCTTGATC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAGATTTCTGGAATTTGCTTTTGAAGGGAGTGTTTGTTCTTGATC  746

seq1  CTTGGTCTCTCCTCCATTGGCCACTTATTAGTGGCTGTTTAGAGGTTAAC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCTCTCCTCCATTGGCCACTTATTAGTGGCTGTTTAGAGGTTAAC  796

seq1  AAAATTTTCTCCAGTTTTTCCTTACTAGAATGTTCTGCCTCACTGAGACT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTCTCCAGTTTTTCCTTACTAGAATGTTCTGCCTCACTGAGACT  846

seq1  CAGAATTGAGTCATCAAATTTTAACTCTCTGAAACAATAGGCCAAAGTAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTGAGTCATCAAATTTTAACTCTCTGAAACAATAGGCCAAAGTAA  896

seq1  ACCCTTCCTTCTTGAAACTGCTTTCCTCAGCTATTTGGTCAAAATGATAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCCTTCTTGAAACTGCTTTCCTCAGCTATTTGGTCAAAATGATAT  946

seq1  AATGCTAAAGAACACAAGAGTCTTCAAGTTAATTCAGATAGAAGTTAAGA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAAAGAACACAAGAGTCTTCAAGTTAATTCAGATAGAAGTTAAGA  996

seq1  TGAGTCATATTTTCTTCAACTACCATACACAAGGCATCTTTTTATAGTAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCATATTTTCTTCAACTACCATACACAAGGCATCTTTTTATAGTAT  1046

seq1  CACTAAGGAACTAATGTTTTTAGTGTTATGAGCATTCAGGCAAATGAATG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGGAACTAATGTTTTTAGTGTTATGAGCATTCAGGCAAATGAATG  1096

seq1  TGTGTTTGCTTGAAAGCTTATGGCTCGAAGTGTAGTTCTAGGAGTGAATA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTGCTTGAAAGCTTATGGCTCGAAGTGTAGTTCTAGGAGTGAATA  1146

seq1  TCTACAATCAAGACCTTGTTTGATATGAATATATACTCATGTACATGTAC  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAATCAAGACCTTGTTTGATATGAATATATACTCATGTACATGTAC  1196

seq1  TGCTGATGAATTC  1205
      |||||||||||||
seq2  TGCTGATGAATTC  1209


seq1: chr8_84050887_84052055
seq2: B6Ng01-226B05.g_66_1233

seq1  GAATTCTTGCCAAGTAATTACCTTGAATATTCTGTCTGTAGGAAAAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCCAAGTAATTACCTTGAATATTCTGTCTGTAGGAAAAATGT  50

seq1  AAAGAGAAGTGGAAATTGGTAAAATTAATTAATTTCTTGCAAAATCACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAGTGGAAATTGGTAAAATTAATTAATTTCTTGCAAAATCACTT  100

seq1  TCCACATCATTAGAACATTTGTTTTCAAATGTCAGAGGCAGATAAAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCATTAGAACATTTGTTTTCAAATGTCAGAGGCAGATAAAATCT  150

seq1  TTTTTGCAGCATACCCTTCTTCAAGTGAGCTGAAGCCCACAGAATACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCAGCATACCCTTCTTCAAGTGAGCTGAAGCCCACAGAATACAAT  200

seq1  GGTAGACATGTAGCATCTCAGAGACTCAGACAGACAAAATTGCCCTCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGACATGTAGCATCTCAGAGACTCAGACAGACAAAATTGCCCTCAGA  250

seq1  ACAGAAAACTGCTGTGCTTTTTATGATCTTTAGAGTTGTTGGTGCATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAACTGCTGTGCTTTTTATGATCTTTAGAGTTGTTGGTGCATGGA  300

seq1  CTTAGGATAAATATGAGCAGACATCGAGAAGCATAGACAACAGGCTTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGATAAATATGAGCAGACATCGAGAAGCATAGACAACAGGCTTGCC  350

seq1  AGCTATACTCCTTACAGACTGAAACATTAAAATCCTACACAATAAAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATACTCCTTACAGACTGAAACATTAAAATCCTACACAATAAAATTT  400

seq1  GTTACATTAAATTCCAAGTAATTGTGAGACATGTTACTAGAAACCGTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATTAAATTCCAAGTAATTGTGAGACATGTTACTAGAAACCGTGGT  450

seq1  AGTAAATGTGACTACATCTCTGCTTTCTGTTATATGACCTTCTTTTCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATGTGACTACATCTCTGCTTTCTGTTATATGACCTTCTTTTCATA  500

seq1  ATTCCCTCTCATTATTAATCATTTTTATTATTTTGTTATTTTAATTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTCTCATTATTAATCATTTTTATTATTTTGTTATTTTAATTTCTA  550

seq1  GCATCAGAAGAAAACAACTTTAGGGAGCCTTTTTGTCCTTCCCCTCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGAAGAAAACAACTTTAGGGAGCCTTTTTGTCCTTCCCCTCTCTG  600

seq1  CACCCTCTGCTCCTTCCCTCTCTTCTCCTTTCTCCCTCTGGTCTCTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCTGCTCCTTCCCTCTCTTCTCCTTTCTCCCTCTGGTCTCTTCCT  650

seq1  CTCCCTCTCTCCACTCTTTCTACTTTTGACCTTCTTTTATCCAGATGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTCTCCACTCTTTCTACTTTTGACCTTCTTTTATCCAGATGTTT  700

seq1  GCTTTAATGTAAAAATTAATGCCACTTTAAATCACATCCTTTCATCTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAATGTAAAAATTAATGCCACTTTAAATCACATCCTTTCATCTTAA  750

seq1  GCTTTAAATACCTGCCCTTTCCTATCCATTTAATCTTTTTACTTTCTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAATACCTGCCCTTTCCTATCCATTTAATCTTTTTACTTTCTCTT  800

seq1  CAACTTTACCCCGTACTCAAAGGCAGCTAATTAGTCAGCATCCACAGCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTACCCCGTACTCAAAGGCAGCTAATTAGTCAGCATCCACAGCAG  850

seq1  AGGTGGAGAAAGGGTTGCTCTCATTTCCAATGCCTTTTATCTCGCTAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGAGAAAGGGTTGCTCTCATTTCCAATGCCTTTTATCTCGCTAATG  900

seq1  AACTGCATTCCGAACTTTGAGAATTCTGATTTGGTTGAGGGGATTTCCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCATTCCGAACTTTGAGAATTCTGATTTGGTTGAGGGGATTTCCCT  950

seq1  GCTTGTTAAGACCCTGGTGTGGTCCTGGCAGCTCTGGGTTATTTGAAATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTAAGACCCTGGTGTGGTCCTGGCAGCTCTGGGTTATTTGAAATC  1000

seq1  AGTTGCTCTGGGCAGCCTGCTCTCATGTTTATGTGTGAATAG-ACAT-AT  1048
      || ||||||||||||||||||||||||||||||||||||||| |||| ||
seq2  AG-TGCTCTGGGCAGCCTGCTCTCATGTTTATGTGTGAATAGAACATAAT  1049

seq1  CGTGTCTATACTAGGAAA-GAAGATCAGCTTCATGTGCATGA-CTCAACA  1096
      |||||||||||||||||| || ||||||| |||||||||||| |||||||
seq2  CGTGTCTATACTAGGAAAGGAGGATCAGC-TCATGTGCATGACCTCAACA  1098

seq1  GAA-GACTATAGTCTTGAGAAAATGATGCTAAGGTGTATTTGAGACTGCT  1145
      ||| |||||||||| ||||||| ||||||||| | ||||| || ||||||
seq2  GAAGGACTATAGTC-TGAGAAATTGATGCTAA-GCGTATTGGA-ACTGCT  1145

seq1  TAAAGGACCACG-CACATACAGTCA  1169
      | |  ||||||| ||||||||||||
seq2  TGA--GACCACGCCACATACAGTCA  1168


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