BAC Information

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BAC

Clone NameB6Ng01-227J01
Chromosome8 (Build37)
Map Location 42,425,713 - 42,569,130
singlet/doubletdoublet
Overlap geneAsah1, Frg1
Upstream gene2900075B16Rik, Zdhhc2, Cnot7, Vps37a, Mtmr7, LOC100039179, Adam24, LOC667019, LOC100039170, LOC436137, Adam25, EG667041, LOC667052, LOC384806, Adam39, LOC384808, EG667077, Slc7a2, Pdgfrl, Mtus1, Fgl1, Pcm1
Downstream geneLOC100039376, Gm1815, LOC671994, Zfp353, EG620772, LOC628212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227J01.bB6Ng01-227J01.g
ACCGA041205GA041206
length1,0381,109
definitionB6Ng01-227J01.b B6Ng01-227J01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(42,568,102 - 42,569,130)(42,425,713 - 42,426,819)
sequence
gaattcaactcacaattcggtgcagcatttcttttgcctcgagaatggtg
aaagggatttggctggtggaagaaaagaaaactgaaggaaaggttaagta
atggcatactaaatttggttggggagaggggagattttctacaatccagc
aatacttttgaacttctttccccatctttattaatgactgtggggaggag
aagcaatcgcctcttaataacctctgcaggcgaatcacaatgcccatctg
taccttgctgttaacattcatagctgagaaacgaaaccaagtaatacagt
cagattagaagtggagggaggcaataaaaataagatccagcctagtaagc
taatatctcttcagggaatgttataaaacacctttatgtaattgaaggaa
gggcctgataagggtgtaatggcagaagagacatggaactgttataagaa
actaaaacaggatttactatgtgcactgacagccagtagagaagctacca
gaatgtgtgtggtagaagaaggtatctagtctcgcagagaaaggaaaaag
aagcctcgggaagaaatgggtgaatctgtaccacagtgcaatacctagct
ctcagaactcacaggcaatgggaaaaacaaaaacagaaaacaataacaaa
aacaacctcctggaattaagtgcattgaggaggcagaaaaacaataaaaa
tcaaatgactcaaagtaattatggaaagaagagaaagctcagacctgtat
ggtttgcctatataatcactttgaagagatcaaccagctgaatatattta
cagatgggcagtactaaacacacacgcccatacgcacacatacaccagat
aaaaaaaggagattgatgtgggggaaattttatggtgccttttatttatt
atttggacatcagagataactctaaatcttatactgaaattcagaagaaa
agtatttacaagtaagtatatggattgctttcttttttcttaaaataact
agggatacaagttccattattccttagatttccttatt
gaattcctattccttccctaaaccatcttggtgatacaggccctgcagaa
gcacctgggcacagtctgtgggtgagggggagctgcttttgcatacctgc
aaactgggtcgacactactgggttaggaggtaagtattagtcatggcaga
ttgtgaccatttaagtcatatgtttagtaacctgcttgcataacccttgt
tgtttaatctaggtattatgttcagcttgtatctcttgataataaccccc
caccctcaaaccaacacaggcacacacccagtcagcatgcatgactgctg
acatatctgacagtgactgtttattgcgcatcacgacaccgcagactgtc
caaaactaaatggatacagtctgccacactgtacagaatgcttcactgtc
aactgtgaaggttagaaagatgaacaagttctgtttgcagttttcataaa
tacattgatttctgaaaaatattaatactatattgtatgaaaatctaaaa
aaatatgattagaaggaaaaaacattacattgattatacataaaagaatt
aaaaataatgagtttgtgggtttttgaagctagactcttcctggggttac
tggcaggcagaataactaggaaaaagagaacacttattcttttttaaaaa
aatagtgtttgtataatagttattttataatcctccaaaacactgtttct
agagtcagaggtctattgattgcccattaaaataagtatcaaatgtctat
ctgaggtactccagccaagcatagcgacattgcactgctgtcaccaccag
caaaggtgaatggcaggttggttctaagagagaaccaggaaaaggaaaac
tactggtgtacagaaaaacataagtatgtagattaaaaaagaaatgttaa
cttttacattaatcacacagggcgctgactcaaacacatcagagaacttt
gatgggtttccatggaggtcacagttaccctttccgcagtggccaaagtg
aatgaactgcaatttctattgtgtgtccctttaaagaatttacctgtgag
tcggaagtgattgattgatcatcagaaccaaacaaacaccaaacagctgt
aaaccatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_42568102_42569130
seq2: B6Ng01-227J01.b_47_1084 (reverse)

seq1  AATAAGGAA--CTAA-GAAT-ATGGAACTTGTATCCCTAGTTATTTTAAG  46
      |||||||||  |||| |||| |||||||||||||||||||||||||||||
seq2  AATAAGGAAATCTAAGGAATAATGGAACTTGTATCCCTAGTTATTTTAAG  50

seq1  -AAAAAGGAAGC-ATTCATATTCTTACTTGTAATTACTTTTCTCTTGAAT  94
       |||||| |||| || ||||| ||||||||||| |||||||||  |||||
seq2  AAAAAAGAAAGCAATCCATATACTTACTTGTAAATACTTTTCTTCTGAAT  100

seq1  TTCAGTATAAGATTTTAGAGTTATCTCTGATGTCCAAAT-ATAAAT-AAA  142
      |||||||||||| |||||||||||||||||||||||||| |||||| |||
seq2  TTCAGTATAAGA-TTTAGAGTTATCTCTGATGTCCAAATAATAAATAAAA  149

seq1  GGCACCATAAAATTT-CCCCACATC-ATCTCCTTTTTTTATCTGGTGTAT  190
      ||||||||||||||| ||||||||| ||||||||||||||||||||||||
seq2  GGCACCATAAAATTTCCCCCACATCAATCTCCTTTTTTTATCTGGTGTAT  199

seq1  GTGTGCGTATGGGCGTGTGTGTTTAGTACTGCCCATCTGTAAATATATTC  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCGTATGGGCGTGTGTGTTTAGTACTGCCCATCTGTAAATATATTC  249

seq1  AGCTGGTTGATCTCTTCAAAGTGATTATATAGGCAAACCATACAGGTCTG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTTGATCTCTTCAAAGTGATTATATAGGCAAACCATACAGGTCTG  299

seq1  AGCTTTCTCTTCTTTCCATAATTACTTTGAGTCATTTGATTTTTATTGTT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCTCTTCTTTCCATAATTACTTTGAGTCATTTGATTTTTATTGTT  349

seq1  TTTCTGCCTCCTCAATGCACTTAATTCCAGGAGGTTGTTTTTGTTATTGT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCTCCTCAATGCACTTAATTCCAGGAGGTTGTTTTTGTTATTGT  399

seq1  TTTCTGTTTTTGTTTTTCCCATTGCCTGTGAGTTCTGAGAGCTAGGTATT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTTTGTTTTTCCCATTGCCTGTGAGTTCTGAGAGCTAGGTATT  449

seq1  GCACTGTGGTACAGATTCACCCATTTCTTCCCGAGGCTTCTTTTTCCTTT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTGGTACAGATTCACCCATTTCTTCCCGAGGCTTCTTTTTCCTTT  499

seq1  CTCTGCGAGACTAGATACCTTCTTCTACCACACACATTCTGGTAGCTTCT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCGAGACTAGATACCTTCTTCTACCACACACATTCTGGTAGCTTCT  549

seq1  CTACTGGCTGTCAGTGCACATAGTAAATCCTGTTTTAGTTTCTTATAACA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGCTGTCAGTGCACATAGTAAATCCTGTTTTAGTTTCTTATAACA  599

seq1  GTTCCATGTCTCTTCTGCCATTACACCCTTATCAGGCCCTTCCTTCAATT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATGTCTCTTCTGCCATTACACCCTTATCAGGCCCTTCCTTCAATT  649

seq1  ACATAAAGGTGTTTTATAACATTCCCTGAAGAGATATTAGCTTACTAGGC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGGTGTTTTATAACATTCCCTGAAGAGATATTAGCTTACTAGGC  699

seq1  TGGATCTTATTTTTATTGCCTCCCTCCACTTCTAATCTGACTGTATTACT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTTATTTTTATTGCCTCCCTCCACTTCTAATCTGACTGTATTACT  749

seq1  TGGTTTCGTTTCTCAGCTATGAATGTTAACAGCAAGGTACAGATGGGCAT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCGTTTCTCAGCTATGAATGTTAACAGCAAGGTACAGATGGGCAT  799

seq1  TGTGATTCGCCTGCAGAGGTTATTAAGAGGCGATTGCTTCTCCTCCCCAC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTCGCCTGCAGAGGTTATTAAGAGGCGATTGCTTCTCCTCCCCAC  849

seq1  AGTCATTAATAAAGATGGGGAAAGAAGTTCAAAAGTATTGCTGGATTGTA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTAATAAAGATGGGGAAAGAAGTTCAAAAGTATTGCTGGATTGTA  899

seq1  GAAAATCTCCCCTCTCCCCAACCAAATTTAGTATGCCATTACTTAACCTT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCTCCCCTCTCCCCAACCAAATTTAGTATGCCATTACTTAACCTT  949

seq1  TCCTTCAGTTTTCTTTTCTTCCACCAGCCAAATCCCTTTCACCATTCTCG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCAGTTTTCTTTTCTTCCACCAGCCAAATCCCTTTCACCATTCTCG  999

seq1  AGGCAAAAGAAATGCTGCACCGAATTGTGAGTTGAATTC  1029
      |||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAAGAAATGCTGCACCGAATTGTGAGTTGAATTC  1038

seq1: chr8_42425713_42426819
seq2: B6Ng01-227J01.g_66_1174

seq1  GAATTCCTATTCCTTCCCTAAACCATCTTGGTGATACAGGCCCTGCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTCCTTCCCTAAACCATCTTGGTGATACAGGCCCTGCAGAA  50

seq1  GCACCTGGGCACAGTCTGTGGGTGAGGGGGAGCTGCTTTTGCATACCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGGGCACAGTCTGTGGGTGAGGGGGAGCTGCTTTTGCATACCTGC  100

seq1  AAACTGGGTCGACACTACTGGGTTAGGAGGTAAGTATTAGTCATGGCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGGTCGACACTACTGGGTTAGGAGGTAAGTATTAGTCATGGCAGA  150

seq1  TTGTGACCATTTAAGTCATATGTTTAGTAACCTGCTTGCATAACCCTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACCATTTAAGTCATATGTTTAGTAACCTGCTTGCATAACCCTTGT  200

seq1  TGTTTAATCTAGGTATTATGTTCAGCTTGTATCTCTTGATAATAACCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATCTAGGTATTATGTTCAGCTTGTATCTCTTGATAATAACCCCC  250

seq1  CACCCTCAAACCAACACAGGCACACACCCAGTCAGCATGCATGACTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCAAACCAACACAGGCACACACCCAGTCAGCATGCATGACTGCTG  300

seq1  ACATATCTGACAGTGACTGTTTATTGCGCATCACGACACCGCAGACTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCTGACAGTGACTGTTTATTGCGCATCACGACACCGCAGACTGTC  350

seq1  CAAAACTAAATGGATACAGTCTGCCACACTGTACAGAATGCTTCACTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTAAATGGATACAGTCTGCCACACTGTACAGAATGCTTCACTGTC  400

seq1  AACTGTGAAGGTTAGAAAGATGAACAAGTTCTGTTTGCAGTTTTCATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGAAGGTTAGAAAGATGAACAAGTTCTGTTTGCAGTTTTCATAAA  450

seq1  TACATTGATTTCTGAAAAATATTAATACTATATTGTATGAAAATCTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGATTTCTGAAAAATATTAATACTATATTGTATGAAAATCTAAAA  500

seq1  AAATATGATTAGAAGGAAAAAACATTACATTGATTATACATAAAAGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGATTAGAAGGAAAAAACATTACATTGATTATACATAAAAGAATT  550

seq1  AAAAATAATGAGTTTGTGGGTTTTTGAAGCTAGACTCTTCCTGGGGTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATGAGTTTGTGGGTTTTTGAAGCTAGACTCTTCCTGGGGTTAC  600

seq1  TGGCAGGCAGAATAACTAGGAAAAAGAGAACACTTATTCTTTTTTAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGCAGAATAACTAGGAAAAAGAGAACACTTATTCTTTTTTAAAAA  650

seq1  AATAGTGTTTGTATAATAGTTATTTTATAATCCTCCAAAACACTGTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGTTTGTATAATAGTTATTTTATAATCCTCCAAAACACTGTTTCT  700

seq1  AGAGTCAGAGGTCTATTGATTGCCCATTAAAATAAGTATCAAATGTCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAGAGGTCTATTGATTGCCCATTAAAATAAGTATCAAATGTCTAT  750

seq1  CTGAGGTACTCCAGCCAAGCATAGCGACATTGCACTGCTGTCACCACCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTACTCCAGCCAAGCATAGCGACATTGCACTGCTGTCACCACCAG  800

seq1  CAAAGGTGAATGGCAGGTTGGTTCTAAGAGAGAACCAGGAAAAGGAAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTGAATGGCAGGTTGGTTCTAAGAGAGAACCAGGAAAAGGAAAAC  850

seq1  TACTGGTGTACAGAAAAACATAAGTATGTAGATTAAAAAAGAAAATGTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||   |||
seq2  TACTGGTGTACAGAAAAACATAAGTATGTAGATTAAAAAAGAAATGTTAA  900

seq1  CTTTTACATTAATCACACAGGGCGCTGACTCAAACACCATCAGAGAACTT  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTTTTACATTAATCACACAGGGCGCTGACTCAAACA-CATCAGAGAACTT  949

seq1  TGATGGG-TTCCATGGAGGTCACAGTTACCCTTTCCGCAGTGG-CAAAGT  998
      ||||||| ||||||||||||||||||||||||||||||||||| ||||||
seq2  TGATGGGTTTCCATGGAGGTCACAGTTACCCTTTCCGCAGTGGCCAAAGT  999

seq1  GAAATGAACTGGCAATTTCTATGTGGTGTCCC-TTAAAGAATTTACCTGT  1047
      | |||||||| |||||||||||   ||||||| |||||||||||||||||
seq2  G-AATGAACT-GCAATTTCTATTGTGTGTCCCTTTAAAGAATTTACCTGT  1047

seq1  GAGTC-GAAGTGA-TGA-TGATCATCAGAA-CAAACAAACAACAAAACAG  1093
      ||||| ||||||| ||| |||||||||||| ||||||||| || ||||||
seq2  GAGTCGGAAGTGATTGATTGATCATCAGAACCAAACAAAC-ACCAAACAG  1096

seq1  CCTGTAAACAATGT  1107
       |||||||| ||||
seq2  -CTGTAAACCATGT  1109