BAC Information

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BAC

Clone NameB6Ng01-228J23
Chromosome8 (Build37)
Map Location 103,870,024 - 103,871,175
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228J23.bB6Ng01-228J23.g
ACCGA041990GA041991
length1,150928
definitionB6Ng01-228J23.b B6Ng01-228J23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttctaaattactgggtaattttctccactccagttgagctat
ataatcagacatggtcaaaacattgtaccaggagtacaatagaacatgaa
ttcaagcaaaccatgactccatggacctgcagctataaaaggtggtcaga
gatgagaatggcaagcaggacttggttgatttttatgtggataaaaatct
gtaattgcactgtacccatggagtttgtaaatgattgtaatttaaaatat
atgttaaattgcacatcttactatattaggcttttggaatcattcatgag
atgggcttcaaatggtctaatttttactcctagtaataatcacaataaaa
caggattcagaaaactggccctaaacataaacaatcttatcttcacagga
caagacttaatagtgatcattatttgaaatggaaattgagcaagtaattt
ttaatttattttatttcacatccattgttttagaaaataacaggcacacc
cctctaaagtaaggactgatttttaggtaaaaatcttgtatttatttaca
tgtaaatcaaatataaaacttatttgttatgaaaaaaaatatttgtctgc
tcaccctgttgtcaaagagtttgggtagctttcctgttttaacctccagg
gattgaaaatgtataaaacttaagcctcatatacattctcttggatctgg
gcgatgcacttttcacattgaaacaggataaaaaagtaagattcttgatg
ataattatttttaatgtggagtataacactattatttattgtcgtttcta
agtgatctaatatgtctaagatcacagcacattgagttgctggtaaggac
tttggtggaagacacagtgtaggggatgtcacaattgggacactttcctt
cattcatagagatttttacaccattacttttccgtccccaatttctatgt
cagacaatattctagatgctcatgttgcaaaggtgaacaaaatagacagt
cttcttgcatgaagaaaattgcttgaattggctggggaaatttagatgag
ttctggactattttcttctctttctcttctcatgacaagtagattctagc
tgaataaggaagaggtggctttaccacgcatctaggacagcaatgcactg


gaattcagtccttgtgggcttaccacttctaatttaatctgtcctttggt
gcatccatgttcaactcacattagggcagtcatatcactgaaattgtatg
ggtataacttctgatattactaggagatacaatcccacagcaaatccccc
atccttgggctcttacaacctttttgtctccttctcttcaacattccctg
agccttggttctggttagaattacatcaagatattgtatatttttgtgac
tattgtgaagggagttgttttcctaatttctttctttgtccctttctcgt
ttgtatagaggacagttactaatttctttttgttaattttatatctagcc
acatttttgaagttgtttaccagctgtagtagttctgtggtagaagtttg
aggatcgcttctgaatatgtgataccttgacttcttcttttccaatttgt
atcctctgaaaattggaaatagttctatgtgaagacccagctatgctgct
cttgggcataaaaacaaaagatgccataccacaagaacacatgctccact
gtgttcatagcagcttttttgtaataaccagaaactagaaacaacccaga
actcctatgacctaagaatgaatactatttagcttttaaatatatggaca
tcatcaattttgcagacaaatagatgggactagaaaaatatcatcctgaa
tgaggatatccacacccagaaagacatacatgatatgtattcactgataa
atgggtattagccacaaagtacagaatacccatgaaacactccacagacc
caaagaagttaaacaagaaggaagtctcaagcaaagatgcttgaataaca
cttaaaaggggaaacaaaatagtcataggtggcagaggggggaataaaat
tgggtgagaaagggggaggaagaccaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103870024_103871175
seq2: B6Ng01-228J23.b_47_1196

seq1  GAATTCTTTTCTAAATTACTGGGTAATTTTCTCCACTCCAGTTGAGCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTAAATTACTGGGTAATTTTCTCCACTCCAGTTGAGCTAT  50

seq1  ATAATCAGACATGGTCAAAACATTGTACCAGGAGTACAATAGAACATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAGACATGGTCAAAACATTGTACCAGGAGTACAATAGAACATGAA  100

seq1  TTCAAGCAAACCATGACTCCATGGACCTGCAGCTATAAAAGGTGGTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCAAACCATGACTCCATGGACCTGCAGCTATAAAAGGTGGTCAGA  150

seq1  GATGAGAATGGCAAGCAGGACTTGGTTGATTTTTATGTGGATAAAAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGAATGGCAAGCAGGACTTGGTTGATTTTTATGTGGATAAAAATCT  200

seq1  GTAATTGCACTGTACCCATGGAGTTTGTAAATGATTGTAATTTAAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGCACTGTACCCATGGAGTTTGTAAATGATTGTAATTTAAAATAT  250

seq1  ATGTTAAATTGCACATCTTACTATATTAGGCTTTTGGAATCATTCATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAATTGCACATCTTACTATATTAGGCTTTTGGAATCATTCATGAG  300

seq1  ATGGGCTTCAAATGGTCTAATTTTTACTCCTAGTAATAATCACAATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTTCAAATGGTCTAATTTTTACTCCTAGTAATAATCACAATAAAA  350

seq1  CAGGATTCAGAAAACTGGCCCTAAACATAAACAATCTTATCTTCACAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTCAGAAAACTGGCCCTAAACATAAACAATCTTATCTTCACAGGA  400

seq1  CAAGACTTAATAGTGATCATTATTTGAAATGGAAATTGAGCAAGTAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTTAATAGTGATCATTATTTGAAATGGAAATTGAGCAAGTAATTT  450

seq1  TTAATTTATTTTATTTCACATCCATTGTTTTAGAAAATAACAGGCACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTATTTTATTTCACATCCATTGTTTTAGAAAATAACAGGCACACC  500

seq1  CCTCTAAAGTAAGGACTGATTTTTAGGTAAAAATCTTGTATTTATTTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAAGTAAGGACTGATTTTTAGGTAAAAATCTTGTATTTATTTACA  550

seq1  TGTAAATCAAATATAAAACTTATTTGTTATGAAAAAAAATATTTGTCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATCAAATATAAAACTTATTTGTTATGAAAAAAAATATTTGTCTGC  600

seq1  TCACCCTGTTGTCAAAGAGTTTGGGTAGCTTTCCTGTTTTAACCTCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTGTTGTCAAAGAGTTTGGGTAGCTTTCCTGTTTTAACCTCCAGG  650

seq1  GATTGAAAATGTATAAAACTTAAGCCTCATATACATTCTCTTGGATCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAAAATGTATAAAACTTAAGCCTCATATACATTCTCTTGGATCTGG  700

seq1  GCGATGCACTTTTCACATTGAAACAGGATAAAAAAGTAAGATTCTTGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATGCACTTTTCACATTGAAACAGGATAAAAAAGTAAGATTCTTGATG  750

seq1  ATAATTATTTTTAATGTGGAGTATAACACTATTATTTATTGTCGTTTCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATTTTTAATGTGGAGTATAACACTATTATTTATTGTCGTTTCTA  800

seq1  AGTGATCTAATATGTCTAAGATCACAGCACATTGAGTTGCTGGTAAGGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATCTAATATGTCTAAGATCACAGCACATTGAGTTGCTGGTAAGGAC  850

seq1  TTTGGTGGAAGACACAGTGTAGGGGATGTCACAATT-GGACACTTTCCTT  899
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTGGTGGAAGACACAGTGTAGGGGATGTCACAATTGGGACACTTTCCTT  900

seq1  CATTCATAGAGATTTTTACACCATTACTTTTCCGTCCCCAATTTCTATGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATAGAGATTTTTACACCATTACTTTTCCGTCCCCAATTTCTATGT  950

seq1  CAGACAATATTCTAGATGCTCATGTTGCAAAGGTGAACAAAATAGACAGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAATATTCTAGATGCTCATGTTGCAAAGGTGAACAAAATAGACAGT  1000

seq1  C-TCTTGCAATGAGAAAAATTTGCTTTGAATTGGCTGGGAAATTTAAGAT  1048
      | |||||||   ||||||  |||| |||||||||||||| || || ||||
seq2  CTTCTTGCATGAAGAAAA--TTGC-TTGAATTGGCTGGGGAAATTTAGAT  1047

seq1  GAGTTCTTGGACTATTTTCTTCTCTTTCCTCTTCTCCATGACAGTTAGAT  1098
      |||||| |||||||||||||||||||| ||||||| |||||||  |||||
seq2  GAGTTC-TGGACTATTTTCTTCTCTTT-CTCTTCT-CATGACAAGTAGAT  1094

seq1  TCTAGTTG-ATTAGGGAGAGGT-GCTT--ACACGCTTCTAAAGAACAGCA  1144
      ||||| || || ||| |||||| ||||   ||||| |||  || ||||||
seq2  TCTAGCTGAATAAGGAAGAGGTGGCTTTACCACGCATCT--AGGACAGCA  1142

seq1  ATGCACTG  1152
      ||||||||
seq2  ATGCACTG  1150


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